Lsi01G010840.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCTCCCGCGCATACCCGGGTTGATCATCACCACCTGCACCTCACATCTCGGCACAGTGGAACGTGTAACCCGCCTGCTGTCTCATTCAACTACATTTGTTCCTATAATTCATAGCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCAGTGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATAGCATAGGCGGGAAAGGGAGCCCGGACGGTGGAAGAGCCAGGGGAGGCCGGGTCATTTGACGGAAATGGAAGGCTTTTCCCCTATTAGAAAAGGCTCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGAGGGAGCGAGCCTATAGAAAAAATCTAA ATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCTCCCGCGCATACCCGGGTTGATCATCACCACCTGCACCTCACATCTCGGCACAGTGGAACGTGTAACCCGCCTGCTGTCTCATTCAACTACATTTGTTCCTATAATTCATAGCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCAGTGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGAAAAGGCTCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGAGGGAGCGAGCCTATAGAAAAAATCTAA ATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCTCCCGCGCATACCCGGGTTGATCATCACCACCTGCACCTCACATCTCGGCACAGTGGAACGTGTAACCCGCCTGCTGTCTCATTCAACTACATTTGTTCCTATAATTCATAGCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCAGTGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGAAAAGGCTCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGAGGGAGCGAGCCTATAGAAAAAATCTAA MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKRGSEPIEKI
BLAST of Lsi01G010840.1 vs. TrEMBL
Match: V9P5B5_SALMI (Uncharacterized protein OS=Salvia miltiorrhiza GN=orf103b PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-33 Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. TrEMBL
Match: A0A0J8BHU9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g022400 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.3e-27 Identity = 70/95 (73.68%), Postives = 76/95 (80.00%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. TrEMBL
Match: W9QM76_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007585 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.3e-27 Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. TrEMBL
Match: K4DEB9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.1e-22 Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. TrEMBL
Match: A0A103YIR5_CYNCS (UDP-glucuronosyl/UDP-glucosyltransferase OS=Cynara cardunculus var. scolymus GN=Ccrd_011728 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.6e-09 Identity = 42/79 (53.16%), Postives = 49/79 (62.03%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. NCBI nr
Match: gi|570700012|ref|YP_008992385.1| (hypothetical protein Salmi_Mp140 (mitochondrion) [Salvia miltiorrhiza]) HSP 1 Score: 150.6 bits (379), Expect = 1.7e-33 Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. NCBI nr
Match: gi|870847185|gb|KMS99593.1| (hypothetical protein BVRB_1g022400 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 130.6 bits (327), Expect = 1.8e-27 Identity = 70/95 (73.68%), Postives = 76/95 (80.00%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. NCBI nr
Match: gi|703078659|ref|XP_010090950.1| (hypothetical protein L484_007585 [Morus notabilis]) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26 Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 1
BLAST of Lsi01G010840.1 vs. NCBI nr
Match: gi|976925995|gb|KVI09874.1| (UDP-glucuronosyl/UDP-glucosyltransferase [Cynara cardunculus var. scolymus]) HSP 1 Score: 68.9 bits (167), Expect = 6.6e-09 Identity = 42/79 (53.16%), Postives = 49/79 (62.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
|