Lsi01G005540.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G005540.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	F-box protein
Location	chr01 : 4462411 .. 4463559 (+)
Sequence length	1149

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

mRNA sequence

ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

Coding sequence (CDS)

ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

Protein sequence

MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFEGIQGNCIYYPRRTMMMKKGF

Homology

[Close]

BLAST of Lsi01G005540.1 vs. Swiss-Prot
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.1e-18
Identity = 98/375 (26.13%), Postives = 163/375 (43.47%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL---PNNDD 68
           S L  +L   I   L + I++ R R +CRS R+S P     +P     L  L   PN   
Sbjct: 5   STLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKPL 64

Query: 69  ADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVD-SPKEGELRFLRPLY 128
            DH  +   L+R   +R            V+ S++ ++ W    D     G+L  L PL 
Sbjct: 65  TDHRRRGEFLSRSAFFR------------VTLSSSPSQGWLIKSDVDVSSGKLHLLDPLS 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMIVN--TEGVCVSEIRKVIMFPDSPWIDTKN 188
               +   E  +  ++L EF I E+ ++Y + +  T        ++V +  D    +   
Sbjct: 125 ----RLPMEHSRKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ-- 184

Query: 189 CAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSME 248
             VL I   GK+ Y  ++  K    +E  +   D+IV++G+ YA+D  GIV+ I  S ++
Sbjct: 185 --VLGIRSTGKMMYWDIKTWK---AKEEGYEFSDIIVHKGQTYALDSIGIVYWI-RSDLK 244

Query: 249 LLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDS 308
            ++  P +  +   + LVEC GE Y+V+R    S  + + DD G  Y             
Sbjct: 245 FIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY------------- 304

Query: 309 DSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFE 368
                     +   F+VY+ D      +  +  VK+LG++A ++    +  FSV A +F 
Sbjct: 305 ---------AKTVGFKVYKFDDE----QGKMMEVKSLGDKAFVIAT--DTCFSVLAHEFY 327

Query: 369 GIQGNCIYYPRRTMM 378
           G   N IY+   TM+
Sbjct: 365 GCLENAIYFTDDTMI 327

[Close]

BLAST of Lsi01G005540.1 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15
Identity = 73/273 (26.74%), Postives = 129/273 (47.25%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  +L   I K L++  D+++ R VC S R++  P    SPL   HLP LP+N  +  
Sbjct: 5   STLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP---KSPLPTHHLPILPDNGGSLF 64

Query: 69  PVKEI--LLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKE--GELRFLRPLY 128
           P   +   L+++ I    P +    +++          W   V+       ++  L PL 
Sbjct: 65  PDSAVGFRLSQRSILLIKPHEPCIESDSFG--------WLIKVEEDLNVPRKVTLLDPLC 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMI--VNTEGVCVSEI---RKVIMFPDSPWID 188
            +      E     +++ +F++ EL + + +   NT G  V  +   + V+ + D    D
Sbjct: 125 DTRNSIP-ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-D 184

Query: 189 TKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSS 248
            K   +L I  +GKL   +  D  WT+I +      DV+++ G+F+AVD  G    +D S
Sbjct: 185 YK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYS 244

Query: 249 SMELLQISPPMSCFGKQKHLVECGGEVYVVDRF 273
           S++L  ++ P+   G +K L+E  GE+ +VD +
Sbjct: 245 SLKLTLVASPV-FGGDKKFLIESCGEMLLVDMY 262

[Close]

BLAST of Lsi01G005540.1 vs. Swiss-Prot
Match: FB117_ARATH (F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-08
Identity = 67/281 (23.84%), Postives = 118/281 (41.99%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S+L  +L         +  DVLR R +C+  R++     A       +LPS      ++ 
Sbjct: 7   SELPGDLINLTANRFSSISDVLRVRSICKPWRSAA----ATPKSFQCNLPS------SNK 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEG-ELRFLRPLYLSN 128
            ++ +L         SP   ++ T     S+ + K W        E  ++  L P     
Sbjct: 67  MIETVL---------SPTTFFRVTGP---SSCSYKGWLIRTKQVSESSKINLLSPF---- 126

Query: 129 FKFTYEALQDEMNLLEFRIHELAKSYMI-----------VNTEGVCVSEIRKVIMFPDSP 188
           F+      Q  ++LL+F + E+ +SY I           +  EG   S I   ++F D+ 
Sbjct: 127 FRQLLTPSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGP--SHILSRVVFLDN- 186

Query: 189 WIDTKNCAVLAIFGNGKLGYAKLRDEK---WTMIEERNFARGDVIVYRGKFYAVDKRGIV 248
                   + A+  + K+   K  +E    WT I+ +     D+I+++G+ YA+D  G +
Sbjct: 187 -------LIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAI 246

Query: 249 FSIDSSSMELLQISP--PMSCFGK---QKHLVECGGEVYVV 270
           + I  S + LLQ +P  PM   G     K LVE  G++ ++
Sbjct: 247 WWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCII 251

[Close]

BLAST of Lsi01G005540.1 vs. Swiss-Prot
Match: FBK27_ARATH (F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana GN=At1g64840 PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 66/280 (23.57%), Postives = 127/280 (45.36%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  EL   I K+LD   DV+  R +CRS R++F PF +    L   LP+      A  
Sbjct: 6   SQLPEELLNLISKNLDNCFDVVHARSICRSWRSAF-PFPSSLSTLSYSLPTF-----AKF 65

Query: 69  PV--KEILLARKI-IYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGE-LRFLRPLY 128
           P+  K++   +KI I+ F          A + +    + +   +D  +  + +    PL 
Sbjct: 66  PLVSKDLCTLKKIQIFLF---------RARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 125

Query: 129 LS-NFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNC 188
            S   KF  ++    +N+L+++I  L   Y+++  +   ++     + F           
Sbjct: 126 CSVKVKFP-QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAFLPVKKNGGDEF 185

Query: 189 AVLAIFGNGKLGYAKLRDEKWTMIEERNFAR-GDVIVYRGKFYAVDKRGIVFSIDSSSME 248
            VL  + N  L   +  + +W  +++ + A    ++ +RG+FY     G ++  D  S+E
Sbjct: 186 VVLLRYRNHLL-VLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYSLE 245

Query: 249 --LLQISPPMSCFGKQKHLVECGG-EVYVVDRFDDFSDSE 280
             LL  S P+      K+L+  G  E+++V++F+ F +++
Sbjct: 246 QTLLMPSEPLR---SSKYLIPNGSDELFLVEKFNPFPEAD 265

[Close]

BLAST of Lsi01G005540.1 vs. Swiss-Prot
Match: FB187_ARATH (Putative F-box protein At3g25750 OS=Arabidopsis thaliana GN=At3g25750 PE=4 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06
Identity = 62/271 (22.88%), Postives = 112/271 (41.33%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           SDL  EL   I     + IDVLR R  C+S R++          + +    L    +   
Sbjct: 7   SDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSA----------VAMSKERLQFRFERYL 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNF 128
           P       +KI    SP   ++ T     S+   K W        +   +      LS  
Sbjct: 67  PTSN----KKIKAHLSPTTFFRIT---LPSSCPNKGWLVRTRQASKMYRKITLLCPLSGE 126

Query: 129 KFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPD--SPWIDTKNCAVL 188
           + T       ++LL+  + E+ +SY I   +G+   +  K+ +  +  S +I   +    
Sbjct: 127 RITRS--HQTLDLLKVGVSEIRQSYEIQIFDGL---KDEKIPLDSEIFSNYIKNSDKIPS 186

Query: 189 AIFGNGKLGYAKLRD--EKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSMELL 248
             + + K+   K R+    WT I+ +     D+I++ G+ YAVD +G ++ I  S + ++
Sbjct: 187 VNYHDNKIWCCKTREGSRSWTKIKNQVEDFSDIILHMGRIYAVDLKGAIWWISLSQLTIV 246

Query: 249 Q--ISPPMSCFG----KQKHLVECGGEVYVV 270
           Q   S P+  +     +   LVE  G++ +V
Sbjct: 247 QQTSSTPLDYYKYDSCQDTRLVEYCGDLCIV 255

[Close]

BLAST of Lsi01G005540.1 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 8.2e-84
Identity = 192/382 (50.26%), Postives = 245/382 (64.14%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAA-----------AKVWFAMV 120
                ADH + +  L R+IIYR SPLD +QT +  SSS+++           A+ W A V
Sbjct: 61  VFA--ADH-LTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKV 120

Query: 121 DSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKV 180
           +S K G++RFL PL     K   + L+ E+NLL+F I+E+AKSY +  T G  V  I KV
Sbjct: 121 ESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKV 180

Query: 181 IMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDK 240
           +MFPDSPWID K C +LAI+  GKLG+AK  D KWT+I+  NF   DVIVY+G+FYAVD+
Sbjct: 181 VMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDR 240

Query: 241 RGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNY 300
            G +F ID SSM+L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++
Sbjct: 241 WGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHW 300

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNK 360
             N   DSS              +  DF+++R+D   +   R +E VKNLGNE+ +LGN 
Sbjct: 301 LNNLIEDSS-------------PKVIDFKLHRLD---QEWGRWVE-VKNLGNESFVLGN- 359

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FSVS   F+G++G+CIY+
Sbjct: 361 -DCCFSVSTPYFKGLKGSCIYF 359

[Close]

BLAST of Lsi01G005540.1 vs. TrEMBL
Match: A0A0A0KHE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/164 (82.93%), Postives = 146/164 (89.02%), Query Frame = 1


Query: 102 AKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGV 161
           AK+WFAM DS KEG LRFLRPLYLSNFKFT+EAL  E+N LEFRI ELAK YM+VNTEGV
Sbjct: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80

Query: 162 CVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYR 221
           CVSEIRKV+MFPDSPWIDTKNC V AIF +GKLG+ KL DEKWTMIE+ NFARGDVIVYR
Sbjct: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140

Query: 222 GKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGE 266
           GKFYAVD+RG VFS+DSSSMEL QIS PMS FGKQKHLVECGGE
Sbjct: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]

BLAST of Lsi01G005540.1 vs. TrEMBL
Match: A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-70
Identity = 169/375 (45.07%), Postives = 228/375 (60.80%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+ +  R SDL P+LW  IGK LD YID++R R VCRS RAS P  +A+S L PL L S 
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPL-LVSH 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKV---WFAMVDSPKEGEL 120
           P     DH +++ L+ R+IIY  SPL  +QT+   SSS+++++    W A V++   G+L
Sbjct: 61  P----FDHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKL 120

Query: 121 RFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPW 180
           RFL PL     K   +  + E+NLL+FRIHE+AKSY++ +T G  +  I KV++FPDS W
Sbjct: 121 RFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIG-GILFINKVVVFPDSAW 180

Query: 181 IDTKNCAVL-AIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSI 240
           ID K  +++ A+   GKLGY K+ D KWT+I   NF   D+IVY G+ Y VD+ G VF I
Sbjct: 181 IDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLI 240

Query: 241 DSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSD 300
           D SSM+L+QISP +     +KHL+ECGGE+YVVDRF                  +  D +
Sbjct: 241 D-SSMKLVQISPELGVISNEKHLIECGGEIYVVDRF----------------LEQKKDPE 300

Query: 301 SSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSV 360
              S  D     E      DF+V+R+D       R +E VKNLGN A ++G+   NSFSV
Sbjct: 301 LLNSWFD-----EPMPRVVDFKVHRLDQEIMGKSRWVE-VKNLGNRAFVVGH---NSFSV 343

Query: 361 SATDFEGIQGNCIYY 372
           SA DFEG + NCIY+
Sbjct: 361 SAADFEGFKENCIYF 343

[Close]

BLAST of Lsi01G005540.1 vs. TrEMBL
Match: A0A0A0KLM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.8e-60
Identity = 158/383 (41.25%), Postives = 212/383 (55.35%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           MDD     S+L PE+W A+GKHL  YIDVLR R VCRS R+S PPF   SP LPL  PS 
Sbjct: 26  MDDAGVPWSELPPEIWPAVGKHLHNYIDVLRFRSVCRSWRSSLPPFSQTSPPLPLPFPSP 85

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVW-FAMVDSPKEGELRF 120
             +           L++  +YR  PL+   T N  SSS+          V+  + G++RF
Sbjct: 86  YISPTLP---LHAFLSQTTLYRLGPLNHQPTPNLSSSSSPTPPNGRLVKVEKSELGKMRF 145

Query: 121 LRPLYLSNFKFTYEALQD------EMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFP 180
           L PL   + K     L+D      E NLL  RIHELA SY +  T+  CV  I K+++FP
Sbjct: 146 LHPL---SKKIIPRNLEDPSEGHNEFNLLHLRIHELAVSYSLKYTDTTCVPGISKIVLFP 205

Query: 181 DSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIV 240
           +S   D K+C ++A+F  GKLG+A+  DEKWT+I+E+NF   DVIVY  ++Y VD+ G V
Sbjct: 206 NSSGSDVKDCTIIAVFEGGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTV 265

Query: 241 FSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRF----DDFSDSEDEVDDGGDNY 300
           F ID  SM L+Q SPP+   G QKHLVECGGE+ V+DRF      F      V+D     
Sbjct: 266 FWID-LSMRLVQFSPPLIGLGHQKHLVECGGELLVIDRFLNKERHFQPVIAAVEDA---- 325

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLN-GEYCRRGLEVVKNLGNEAIILGN 360
            E              +      +  DF+ Y++D   G +       +KNL N++IILGN
Sbjct: 326 -EVQQQQQPFIIPVRHTPYNSLPKAVDFKAYKLDQEWGTWVE-----LKNLRNQSIILGN 385

Query: 361 KRENSFSVSATDFEGIQGNCIYY 372
             +  FS+ A++FEG + NC+YY
Sbjct: 386 --DCCFSIEASEFEGCKKNCVYY 389

[Close]

BLAST of Lsi01G005540.1 vs. TrEMBL
Match: G7LA96_MEDTR (F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53
Identity = 142/371 (38.27%), Postives = 197/371 (53.10%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  ELW  IGK+LD +IDVLR R VC S R+S PP    SP  PL +P         H
Sbjct: 27  SQLPIELWPKIGKYLDNHIDVLRFRSVCESFRSSIPPSHPNSPSFPLQIP---------H 86

Query: 69  PVKEIL---LARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYL 128
           PV   L   + +  +Y   P D    +N    + +++K W   V+  K   +  L P+  
Sbjct: 87  PVYNSLNNYVNQSTVYIIEPTDASSNSNLEPLAPSSSKGWLIKVEETKNQPVSLLSPI-- 146

Query: 129 SNFKFTYEALQDEM-----NLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDT 188
           S+ K +Y    +       NLL++R+ EL KSY I  T     S I KV  +P+SPW   
Sbjct: 147 SDRKLSYPLSNNNTSPMLWNLLDYRVIELCKSYKIEKTTPFSSSAI-KVAFYPNSPWTSV 206

Query: 189 KNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSS 248
           ++C    IF  GKLG  K  DEKWT+++++NF   D+IV++G+FY  DK G +  ID S+
Sbjct: 207 EDCVACCIFQEGKLGLMKHGDEKWTLVDDKNFYYDDIIVFKGQFYVTDKWGTISWIDVST 266

Query: 249 MELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSES 308
           + L+Q SPP+  FG +KHL+E  G +YVVDR+ + S      DD G NY           
Sbjct: 267 LRLIQFSPPLCGFGNKKHLMESCGSLYVVDRYYEIS------DDMGRNYVRR------RY 326

Query: 309 DSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATD 368
           D D+D E         F+VY++D   E   + ++ VKNL + A IL   +  +FSVS  D
Sbjct: 327 DRDTDVEC--------FKVYKLD---EEWGKWVD-VKNLRDRAFIL--SKSCNFSVSTKD 359

Query: 369 FEGIQGNCIYY 372
             G QGNCIY+
Sbjct: 387 LIGYQGNCIYF 359

[Close]

BLAST of Lsi01G005540.1 vs. TAIR10
Match: AT1G65770.1 (AT1G65770.1 ascorbic acid mannose pathway regulator 1)

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-19
Identity = 98/375 (26.13%), Postives = 163/375 (43.47%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL---PNNDD 68
           S L  +L   I   L + I++ R R +CRS R+S P     +P     L  L   PN   
Sbjct: 5   STLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKPL 64

Query: 69  ADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVD-SPKEGELRFLRPLY 128
            DH  +   L+R   +R            V+ S++ ++ W    D     G+L  L PL 
Sbjct: 65  TDHRRRGEFLSRSAFFR------------VTLSSSPSQGWLIKSDVDVSSGKLHLLDPLS 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMIVN--TEGVCVSEIRKVIMFPDSPWIDTKN 188
               +   E  +  ++L EF I E+ ++Y + +  T        ++V +  D    +   
Sbjct: 125 ----RLPMEHSRKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ-- 184

Query: 189 CAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSME 248
             VL I   GK+ Y  ++  K    +E  +   D+IV++G+ YA+D  GIV+ I  S ++
Sbjct: 185 --VLGIRSTGKMMYWDIKTWK---AKEEGYEFSDIIVHKGQTYALDSIGIVYWI-RSDLK 244

Query: 249 LLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDS 308
            ++  P +  +   + LVEC GE Y+V+R    S  + + DD G  Y             
Sbjct: 245 FIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY------------- 304

Query: 309 DSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFE 368
                     +   F+VY+ D      +  +  VK+LG++A ++    +  FSV A +F 
Sbjct: 305 ---------AKTVGFKVYKFDDE----QGKMMEVKSLGDKAFVIAT--DTCFSVLAHEFY 327

Query: 369 GIQGNCIYYPRRTMM 378
           G   N IY+   TM+
Sbjct: 365 GCLENAIYFTDDTMI 327

[Close]

BLAST of Lsi01G005540.1 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-16
Identity = 73/273 (26.74%), Postives = 129/273 (47.25%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  +L   I K L++  D+++ R VC S R++  P    SPL   HLP LP+N  +  
Sbjct: 5   STLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP---KSPLPTHHLPILPDNGGSLF 64

Query: 69  PVKEI--LLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKE--GELRFLRPLY 128
           P   +   L+++ I    P +    +++          W   V+       ++  L PL 
Sbjct: 65  PDSAVGFRLSQRSILLIKPHEPCIESDSFG--------WLIKVEEDLNVPRKVTLLDPLC 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMI--VNTEGVCVSEI---RKVIMFPDSPWID 188
            +      E     +++ +F++ EL + + +   NT G  V  +   + V+ + D    D
Sbjct: 125 DTRNSIP-ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-D 184

Query: 189 TKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSS 248
            K   +L I  +GKL   +  D  WT+I +      DV+++ G+F+AVD  G    +D S
Sbjct: 185 YK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYS 244

Query: 249 SMELLQISPPMSCFGKQKHLVECGGEVYVVDRF 273
           S++L  ++ P+   G +K L+E  GE+ +VD +
Sbjct: 245 SLKLTLVASPV-FGGDKKFLIESCGEMLLVDMY 262

[Close]

BLAST of Lsi01G005540.1 vs. TAIR10
Match: AT2G26160.1 (AT2G26160.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09
Identity = 67/281 (23.84%), Postives = 118/281 (41.99%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S+L  +L         +  DVLR R +C+  R++     A       +LPS      ++ 
Sbjct: 7   SELPGDLINLTANRFSSISDVLRVRSICKPWRSAA----ATPKSFQCNLPS------SNK 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEG-ELRFLRPLYLSN 128
            ++ +L         SP   ++ T     S+ + K W        E  ++  L P     
Sbjct: 67  MIETVL---------SPTTFFRVTGP---SSCSYKGWLIRTKQVSESSKINLLSPF---- 126

Query: 129 FKFTYEALQDEMNLLEFRIHELAKSYMI-----------VNTEGVCVSEIRKVIMFPDSP 188
           F+      Q  ++LL+F + E+ +SY I           +  EG   S I   ++F D+ 
Sbjct: 127 FRQLLTPSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGP--SHILSRVVFLDN- 186

Query: 189 WIDTKNCAVLAIFGNGKLGYAKLRDEK---WTMIEERNFARGDVIVYRGKFYAVDKRGIV 248
                   + A+  + K+   K  +E    WT I+ +     D+I+++G+ YA+D  G +
Sbjct: 187 -------LIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAI 246

Query: 249 FSIDSSSMELLQISP--PMSCFGK---QKHLVECGGEVYVV 270
           + I  S + LLQ +P  PM   G     K LVE  G++ ++
Sbjct: 247 WWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCII 251

[Close]

BLAST of Lsi01G005540.1 vs. TAIR10
Match: AT1G64840.1 (AT1G64840.1 Protein of unknown function (DUF295))

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-08
Identity = 66/280 (23.57%), Postives = 127/280 (45.36%), Query Frame = 1


Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  EL   I K+LD   DV+  R +CRS R++F PF +    L   LP+      A  
Sbjct: 6   SQLPEELLNLISKNLDNCFDVVHARSICRSWRSAF-PFPSSLSTLSYSLPTF-----AKF 65

Query: 69  PV--KEILLARKI-IYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGE-LRFLRPLY 128
           P+  K++   +KI I+ F          A + +    + +   +D  +  + +    PL 
Sbjct: 66  PLVSKDLCTLKKIQIFLF---------RARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 125

Query: 129 LS-NFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNC 188
            S   KF  ++    +N+L+++I  L   Y+++  +   ++     + F           
Sbjct: 126 CSVKVKFP-QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAFLPVKKNGGDEF 185

Query: 189 AVLAIFGNGKLGYAKLRDEKWTMIEERNFAR-GDVIVYRGKFYAVDKRGIVFSIDSSSME 248
            VL  + N  L   +  + +W  +++ + A    ++ +RG+FY     G ++  D  S+E
Sbjct: 186 VVLLRYRNHLL-VLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYSLE 245

Query: 249 --LLQISPPMSCFGKQKHLVECGG-EVYVVDRFDDFSDSE 280
             LL  S P+      K+L+  G  E+++V++F+ F +++
Sbjct: 246 QTLLMPSEPLR---SSKYLIPNGSDELFLVEKFNPFPEAD 265

[Close]

BLAST of Lsi01G005540.1 vs. TAIR10
Match: AT2G16300.1 (AT2G16300.1 F-box family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 78/302 (25.83%), Postives = 123/302 (40.73%), Query Frame = 1


Query: 11  LLP-ELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNN------ 70
           LLP +L   I  HL+T  +++  R VC S R+  PP D  S  L +    +  N      
Sbjct: 6   LLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQ-SRCLSIKTHDISFNAGFSFS 65

Query: 71  -DDADHPVKEILLARKIIYR---------------------------FSPLDIYQTTNAV 130
               DHP+    L +  IY                             SPL    ++N +
Sbjct: 66  GQPTDHPLFGSTLTKIPIYLVKFWTPFGDDYLLAEMREREGGEPMFLLSPL----SSNRI 125

Query: 131 SSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMI 190
                  KV F  + SP            +  F   YE    E   + +R       ++ 
Sbjct: 126 IYGMGINKVLFNSLTSP------------IIPFGQYYEITYSEKQPIRYRYG--LPCHLW 185

Query: 191 VNTEGVCVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEER--NFA 250
              E V ++E R   +  DS   D+++ AVL       L   + R+  WT + E    +A
Sbjct: 186 DKLEWVEITE-RVEFLKLDSE--DSRDFAVLFAGRMCNLVMYRSRNMSWTQVVEHPEKYA 245

Query: 251 RGDVIVYRGKFYAVDK--RGIVFSIDSSSMELLQI-SPPMSCFGKQKHLVECGGEVYVVD 273
             D++ ++GKFYA+D   RG VF ++  S+E+++I S   S    +++LV  G E+ +V 
Sbjct: 246 YQDLVAFKGKFYALDSSGRGRVFVVE-LSLEVMEIPSVRGSQQSSKENLVLSGEELLLVQ 284

[Close]

BLAST of Lsi01G005540.1 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 6.3e-85
Identity = 193/379 (50.92%), Postives = 245/379 (64.64%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTA--------AAKVWFAMVDSP 120
                ADH + +  L R+IIYR SPLD ++T +  SSST+        AA+ W A V+S 
Sbjct: 61  VFA--ADH-LTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEGWLAKVEST 120

Query: 121 KEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMF 180
           K G++RFL PL     K   +  + E+NLL+F I+E+AKSY +  T G  V  I KV+MF
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGSPVPRITKVVMF 180

Query: 181 PDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGI 240
           PDSPWID K C +LA++  GKLG+AK  D+KWT+I+ RNF   DVIVY+G+FYAVD+ G 
Sbjct: 181 PDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYKGQFYAVDRWGT 240

Query: 241 VFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNEN 300
           VF IDSS M L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++  N
Sbjct: 241 VFWIDSS-MRLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHWLNN 300

Query: 301 DDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKREN 360
              DS               +  DF+++R+D   +   R +EV KNLGN++ ILGN  + 
Sbjct: 301 LIEDSPP-------------KVIDFKLHRLD---QEWGRWVEV-KNLGNQSFILGN--DC 356

Query: 361 SFSVSATDFEGIQGNCIYY 372
            FSVS  +FEG++G+CIY+
Sbjct: 361 CFSVSTPNFEGLKGSCIYF 356

[Close]

BLAST of Lsi01G005540.1 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 192/382 (50.26%), Postives = 245/382 (64.14%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAA-----------AKVWFAMV 120
                ADH + +  L R+IIYR SPLD +QT +  SSS+++           A+ W A V
Sbjct: 61  VFA--ADH-LTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKV 120

Query: 121 DSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKV 180
           +S K G++RFL PL     K   + L+ E+NLL+F I+E+AKSY +  T G  V  I KV
Sbjct: 121 ESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKV 180

Query: 181 IMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDK 240
           +MFPDSPWID K C +LAI+  GKLG+AK  D KWT+I+  NF   DVIVY+G+FYAVD+
Sbjct: 181 VMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDR 240

Query: 241 RGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNY 300
            G +F ID SSM+L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++
Sbjct: 241 WGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHW 300

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNK 360
             N   DSS              +  DF+++R+D   +   R +E VKNLGNE+ +LGN 
Sbjct: 301 LNNLIEDSS-------------PKVIDFKLHRLD---QEWGRWVE-VKNLGNESFVLGN- 359

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FSVS   F+G++G+CIY+
Sbjct: 361 -DCCFSVSTPYFKGLKGSCIYF 359

[Close]

BLAST of Lsi01G005540.1 vs. NCBI nr
Match: gi|700193764|gb|KGN48968.1| (hypothetical protein Csa_6G507410 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 136/164 (82.93%), Postives = 146/164 (89.02%), Query Frame = 1


Query: 102 AKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGV 161
           AK+WFAM DS KEG LRFLRPLYLSNFKFT+EAL  E+N LEFRI ELAK YM+VNTEGV
Sbjct: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80

Query: 162 CVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYR 221
           CVSEIRKV+MFPDSPWIDTKNC V AIF +GKLG+ KL DEKWTMIE+ NFARGDVIVYR
Sbjct: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140

Query: 222 GKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGE 266
           GKFYAVD+RG VFS+DSSSMEL QIS PMS FGKQKHLVECGGE
Sbjct: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]

BLAST of Lsi01G005540.1 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 5.7e-70
Identity = 169/375 (45.07%), Postives = 228/375 (60.80%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+ +  R SDL P+LW  IGK LD YID++R R VCRS RAS P  +A+S L PL L S 
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPL-LVSH 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKV---WFAMVDSPKEGEL 120
           P     DH +++ L+ R+IIY  SPL  +QT+   SSS+++++    W A V++   G+L
Sbjct: 61  P----FDHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKL 120

Query: 121 RFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPW 180
           RFL PL     K   +  + E+NLL+FRIHE+AKSY++ +T G  +  I KV++FPDS W
Sbjct: 121 RFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIG-GILFINKVVVFPDSAW 180

Query: 181 IDTKNCAVL-AIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSI 240
           ID K  +++ A+   GKLGY K+ D KWT+I   NF   D+IVY G+ Y VD+ G VF I
Sbjct: 181 IDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLI 240

Query: 241 DSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSD 300
           D SSM+L+QISP +     +KHL+ECGGE+YVVDRF                  +  D +
Sbjct: 241 D-SSMKLVQISPELGVISNEKHLIECGGEIYVVDRF----------------LEQKKDPE 300

Query: 301 SSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSV 360
              S  D     E      DF+V+R+D       R +E VKNLGN A ++G+   NSFSV
Sbjct: 301 LLNSWFD-----EPMPRVVDFKVHRLDQEIMGKSRWVE-VKNLGNRAFVVGH---NSFSV 343

Query: 361 SATDFEGIQGNCIYY 372
           SA DFEG + NCIY+
Sbjct: 361 SAADFEGFKENCIYF 343

[Close]

BLAST of Lsi01G005540.1 vs. NCBI nr
Match: gi|659072629|ref|XP_008466513.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 161/382 (42.15%), Postives = 220/382 (57.59%), Query Frame = 1


Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPS- 60
           MDD     S+L PE+W A+GKHL TYIDVLR R VCRS R+S PPF   SP LPL  PS 
Sbjct: 1   MDDAGVPWSELPPEIWPAVGKHLHTYIDVLRFRSVCRSWRSSLPPFTQTSPPLPLRFPSP 60

Query: 61  -LPNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVW-FAMVDSPKEGEL 120
            +  N   D       L++ IIYR +PL+   + N  SSS+   +      V+  + G++
Sbjct: 61  YISANLSVD-----AFLSQTIIYRLAPLNHEPSPNVSSSSSPPPRNGRLVKVEKSELGKM 120

Query: 121 RFLRPLYLSNFKFTYEALQ---DEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPD 180
           RFL PL     +   E L    +E+NLL+ R+ ELA SY +  ++  CV  I K+++FP+
Sbjct: 121 RFLHPLSKQIIRCNLEDLSQGHNELNLLDLRMDELAVSYSLKYSDTTCVPGISKIVVFPN 180

Query: 181 SPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVF 240
           S   D K+C ++A+F  GKLG+A+  DEKWT+I+E+NF   DVIVY  ++Y VD+ G VF
Sbjct: 181 SSGSDVKDCTIIAVFECGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTVF 240

Query: 241 SIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDD----FSDSEDEVDDGGDNYN 300
            ID SSM L+Q SPP+   G  KHLVECGGE+ V+DRF D    F  +   VDD     +
Sbjct: 241 WID-SSMRLVQFSPPLIGLGHHKHLVECGGELLVIDRFLDKERHFQPAIAAVDDAEQQQH 300

Query: 301 ENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLN-GEYCRRGLEVVKNLGNEAIILGNK 360
                      S          +  DF+ Y++D   G +       +KNLGN +IILGN 
Sbjct: 301 HFMIPVQRPPYSSL-------PKAVDFKAYKLDQEWGTWVE-----LKNLGNRSIILGN- 360

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FS+ A++FEG + NC+YY
Sbjct: 361 -DCCFSIEASEFEGCKKNCVYY 362

The following BLAST results are available for this feature:

BLAST of Lsi01G005540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB72_ARATH	5.1e-18	26.13	Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1	[more]
SKI23_ARATH	3.1e-15	26.74	F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1	[more]
FB117_ARATH	4.7e-08	23.84	F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1	[more]
FBK27_ARATH	1.8e-07	23.57	F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana GN=At1g64840 PE=2 S...	[more]
FB187_ARATH	2.0e-06	22.88	Putative F-box protein At3g25750 OS=Arabidopsis thaliana GN=At3g25750 PE=4 SV=2	[more]

BLAST of Lsi01G005540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJJ1_CUCSA	8.2e-84	50.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1	[more]
A0A0A0KHE7_CUCSA	2.9e-73	82.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1	[more]
A0A0A0KGT9_CUCSA	4.0e-70	45.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1	[more]
A0A0A0KLM6_CUCSA	2.8e-60	41.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1	[more]
G7LA96_MEDTR	2.0e-53	38.27	F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1	[more]

BLAST of Lsi01G005540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65770.1	2.8e-19	26.13	ascorbic acid mannose pathway regulator 1	[more]
AT2G17030.1	1.7e-16	26.74	F-box family protein with a domain of unknown function (DUF295)	[more]
AT2G26160.1	2.7e-09	23.84	F-box family protein with a domain of unknown function (DUF295)	[more]
AT1G64840.1	1.0e-08	23.57	Protein of unknown function (DUF295)	[more]
AT2G16300.1	1.9e-07	25.83	F-box family protein	[more]

BLAST of Lsi01G005540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081066\|ref\|XP_008441132.1\|	6.3e-85	50.92	PREDICTED: F-box protein At2g17036 [Cucumis melo]	[more]
gi\|778719846\|ref\|XP_004134837.2\|	1.2e-83	50.26	PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]	[more]
gi\|700193764\|gb\|KGN48968.1\|	4.2e-73	82.93	hypothetical protein Csa_6G507410 [Cucumis sativus]	[more]
gi\|449434450\|ref\|XP_004135009.1\|	5.7e-70	45.07	PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]	[more]
gi\|659072629\|ref\|XP_008466513.1\|	1.0e-63	42.15	PREDICTED: putative F-box protein At1g65770 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005174	DUF295

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi01G005540	Lsi01G005540	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi01G005540.1.CDS.1	Lsi01G005540.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi01G005540.1	Lsi01G005540.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 336..371 score: 5.8
None	No IPR available	unknown	Coil	Coil	coord: 132..152 scor
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 17..296 score: 4.6E-24coord: 313..371 score: 4.6
None	No IPR available	PANTHER	PTHR11102:SF101	SUBFAMILY NOT NAMED	coord: 17..296 score: 4.6E-24coord: 313..371 score: 4.6