Lsi01G005540 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G005540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionF-box protein
Locationchr01 : 4462411 .. 4463559 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

mRNA sequence

ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

Coding sequence (CDS)

ATGGACGACACCTCTGCACGGTGCTCCGATCTCCTTCCTGAACTTTGGACGGCCATCGGAAAACACCTCGATACCTACATCGACGTTCTCCGATGTCGCGGTGTTTGCCGATCATTGCGTGCTTCTTTTCCTCCCTTCGACGCCGTTTCTCCTCTTCTACCTCTCCACCTCCCTTCTCTTCCCAACAACGACGACGCCGATCATCCAGTCAAAGAAATTTTACTCGCTCGGAAGATAATCTATCGCTTCAGTCCTCTCGATATCTATCAAACTACTAACGCTGTTTCTTCTTCTACAGCGGCGGCAAAGGTATGGTTTGCGATGGTCGACAGTCCAAAGGAAGGTGAATTGCGATTTCTGCGTCCACTATACTTATCTAATTTTAAATTCACCTACGAAGCTCTTCAGGATGAAATGAACTTACTGGAATTTCGAATTCACGAATTGGCTAAATCGTATATGATTGTAAACACGGAAGGCGTTTGTGTTTCTGAAATTCGTAAGGTCATAATGTTCCCTGATTCTCCTTGGATCGACACGAAGAACTGCGCAGTTTTAGCAATTTTCGGAAACGGAAAATTAGGTTACGCTAAACTTAGGGATGAGAAATGGACGATGATTGAGGAACGAAATTTTGCCCGCGGCGATGTGATTGTATACAGGGGAAAGTTCTATGCAGTTGATAAAAGAGGAATAGTTTTCTCGATCGATTCATCGTCGATGGAATTGTTACAGATTTCTCCTCCAATGAGTTGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATGTAGTGGATCGATTCGATGATTTCAGTGACAGTGAAGATGAAGTTGATGATGGTGGTGATAATTATAATGAAAATGATGACAGTGATAGCAGTGAAAGTGATAGTGATAGTGATAGTGAGAGTGAGGAAGAAGAAGAAGAAGCTGATTTCGAAGTGTATAGAGTGGATTTGAATGGAGAATACTGTAGAAGAGGATTGGAGGTGGTGAAGAATTTGGGGAATGAAGCGATTATTTTGGGGAATAAGAGGGAGAATAGTTTCTCAGTTTCAGCTACAGATTTTGAAGGAATTCAAGGGAATTGCATATATTATCCTCGAAGAACAATGATGATGAAGAAAGGATTCTGA

Protein sequence

MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFEGIQGNCIYYPRRTMMMKKGF
Homology
[Close]
BLAST of Lsi01G005540 vs. Swiss-Prot
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.1e-18
Identity = 98/375 (26.13%), Postives = 163/375 (43.47%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL---PNNDD 68
           S L  +L   I   L + I++ R R +CRS R+S P     +P     L  L   PN   
Sbjct: 5   STLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKPL 64

Query: 69  ADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVD-SPKEGELRFLRPLY 128
            DH  +   L+R   +R            V+ S++ ++ W    D     G+L  L PL 
Sbjct: 65  TDHRRRGEFLSRSAFFR------------VTLSSSPSQGWLIKSDVDVSSGKLHLLDPLS 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMIVN--TEGVCVSEIRKVIMFPDSPWIDTKN 188
               +   E  +  ++L EF I E+ ++Y + +  T        ++V +  D    +   
Sbjct: 125 ----RLPMEHSRKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ-- 184

Query: 189 CAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSME 248
             VL I   GK+ Y  ++  K    +E  +   D+IV++G+ YA+D  GIV+ I  S ++
Sbjct: 185 --VLGIRSTGKMMYWDIKTWK---AKEEGYEFSDIIVHKGQTYALDSIGIVYWI-RSDLK 244

Query: 249 LLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDS 308
            ++  P +  +   + LVEC GE Y+V+R    S  + + DD G  Y             
Sbjct: 245 FIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY------------- 304

Query: 309 DSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFE 368
                     +   F+VY+ D      +  +  VK+LG++A ++    +  FSV A +F 
Sbjct: 305 ---------AKTVGFKVYKFDDE----QGKMMEVKSLGDKAFVIAT--DTCFSVLAHEFY 327

Query: 369 GIQGNCIYYPRRTMM 378
           G   N IY+   TM+
Sbjct: 365 GCLENAIYFTDDTMI 327

[Close]
BLAST of Lsi01G005540 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15
Identity = 73/273 (26.74%), Postives = 129/273 (47.25%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  +L   I K L++  D+++ R VC S R++  P    SPL   HLP LP+N  +  
Sbjct: 5   STLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP---KSPLPTHHLPILPDNGGSLF 64

Query: 69  PVKEI--LLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKE--GELRFLRPLY 128
           P   +   L+++ I    P +    +++          W   V+       ++  L PL 
Sbjct: 65  PDSAVGFRLSQRSILLIKPHEPCIESDSFG--------WLIKVEEDLNVPRKVTLLDPLC 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMI--VNTEGVCVSEI---RKVIMFPDSPWID 188
            +      E     +++ +F++ EL + + +   NT G  V  +   + V+ + D    D
Sbjct: 125 DTRNSIP-ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-D 184

Query: 189 TKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSS 248
            K   +L I  +GKL   +  D  WT+I +      DV+++ G+F+AVD  G    +D S
Sbjct: 185 YK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYS 244

Query: 249 SMELLQISPPMSCFGKQKHLVECGGEVYVVDRF 273
           S++L  ++ P+   G +K L+E  GE+ +VD +
Sbjct: 245 SLKLTLVASPV-FGGDKKFLIESCGEMLLVDMY 262

[Close]
BLAST of Lsi01G005540 vs. Swiss-Prot
Match: FB117_ARATH (F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.7e-08
Identity = 67/281 (23.84%), Postives = 118/281 (41.99%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S+L  +L         +  DVLR R +C+  R++     A       +LPS      ++ 
Sbjct: 7   SELPGDLINLTANRFSSISDVLRVRSICKPWRSAA----ATPKSFQCNLPS------SNK 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEG-ELRFLRPLYLSN 128
            ++ +L         SP   ++ T     S+ + K W        E  ++  L P     
Sbjct: 67  MIETVL---------SPTTFFRVTGP---SSCSYKGWLIRTKQVSESSKINLLSPF---- 126

Query: 129 FKFTYEALQDEMNLLEFRIHELAKSYMI-----------VNTEGVCVSEIRKVIMFPDSP 188
           F+      Q  ++LL+F + E+ +SY I           +  EG   S I   ++F D+ 
Sbjct: 127 FRQLLTPSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGP--SHILSRVVFLDN- 186

Query: 189 WIDTKNCAVLAIFGNGKLGYAKLRDEK---WTMIEERNFARGDVIVYRGKFYAVDKRGIV 248
                   + A+  + K+   K  +E    WT I+ +     D+I+++G+ YA+D  G +
Sbjct: 187 -------LIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAI 246

Query: 249 FSIDSSSMELLQISP--PMSCFGK---QKHLVECGGEVYVV 270
           + I  S + LLQ +P  PM   G     K LVE  G++ ++
Sbjct: 247 WWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCII 251

[Close]
BLAST of Lsi01G005540 vs. Swiss-Prot
Match: FBK27_ARATH (F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana GN=At1g64840 PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 66/280 (23.57%), Postives = 127/280 (45.36%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  EL   I K+LD   DV+  R +CRS R++F PF +    L   LP+      A  
Sbjct: 6   SQLPEELLNLISKNLDNCFDVVHARSICRSWRSAF-PFPSSLSTLSYSLPTF-----AKF 65

Query: 69  PV--KEILLARKI-IYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGE-LRFLRPLY 128
           P+  K++   +KI I+ F          A + +    + +   +D  +  + +    PL 
Sbjct: 66  PLVSKDLCTLKKIQIFLF---------RARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 125

Query: 129 LS-NFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNC 188
            S   KF  ++    +N+L+++I  L   Y+++  +   ++     + F           
Sbjct: 126 CSVKVKFP-QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAFLPVKKNGGDEF 185

Query: 189 AVLAIFGNGKLGYAKLRDEKWTMIEERNFAR-GDVIVYRGKFYAVDKRGIVFSIDSSSME 248
            VL  + N  L   +  + +W  +++ + A    ++ +RG+FY     G ++  D  S+E
Sbjct: 186 VVLLRYRNHLL-VLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYSLE 245

Query: 249 --LLQISPPMSCFGKQKHLVECGG-EVYVVDRFDDFSDSE 280
             LL  S P+      K+L+  G  E+++V++F+ F +++
Sbjct: 246 QTLLMPSEPLR---SSKYLIPNGSDELFLVEKFNPFPEAD 265

[Close]
BLAST of Lsi01G005540 vs. Swiss-Prot
Match: FB187_ARATH (Putative F-box protein At3g25750 OS=Arabidopsis thaliana GN=At3g25750 PE=4 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06
Identity = 62/271 (22.88%), Postives = 112/271 (41.33%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           SDL  EL   I     + IDVLR R  C+S R++          + +    L    +   
Sbjct: 7   SDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSA----------VAMSKERLQFRFERYL 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNF 128
           P       +KI    SP   ++ T     S+   K W        +   +      LS  
Sbjct: 67  PTSN----KKIKAHLSPTTFFRIT---LPSSCPNKGWLVRTRQASKMYRKITLLCPLSGE 126

Query: 129 KFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPD--SPWIDTKNCAVL 188
           + T       ++LL+  + E+ +SY I   +G+   +  K+ +  +  S +I   +    
Sbjct: 127 RITRS--HQTLDLLKVGVSEIRQSYEIQIFDGL---KDEKIPLDSEIFSNYIKNSDKIPS 186

Query: 189 AIFGNGKLGYAKLRD--EKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSMELL 248
             + + K+   K R+    WT I+ +     D+I++ G+ YAVD +G ++ I  S + ++
Sbjct: 187 VNYHDNKIWCCKTREGSRSWTKIKNQVEDFSDIILHMGRIYAVDLKGAIWWISLSQLTIV 246

Query: 249 Q--ISPPMSCFG----KQKHLVECGGEVYVV 270
           Q   S P+  +     +   LVE  G++ +V
Sbjct: 247 QQTSSTPLDYYKYDSCQDTRLVEYCGDLCIV 255

[Close]
BLAST of Lsi01G005540 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 8.2e-84
Identity = 192/382 (50.26%), Postives = 245/382 (64.14%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAA-----------AKVWFAMV 120
                ADH + +  L R+IIYR SPLD +QT +  SSS+++           A+ W A V
Sbjct: 61  VFA--ADH-LTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKV 120

Query: 121 DSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKV 180
           +S K G++RFL PL     K   + L+ E+NLL+F I+E+AKSY +  T G  V  I KV
Sbjct: 121 ESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKV 180

Query: 181 IMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDK 240
           +MFPDSPWID K C +LAI+  GKLG+AK  D KWT+I+  NF   DVIVY+G+FYAVD+
Sbjct: 181 VMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDR 240

Query: 241 RGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNY 300
            G +F ID SSM+L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++
Sbjct: 241 WGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHW 300

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNK 360
             N   DSS              +  DF+++R+D   +   R +E VKNLGNE+ +LGN 
Sbjct: 301 LNNLIEDSS-------------PKVIDFKLHRLD---QEWGRWVE-VKNLGNESFVLGN- 359

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FSVS   F+G++G+CIY+
Sbjct: 361 -DCCFSVSTPYFKGLKGSCIYF 359

[Close]
BLAST of Lsi01G005540 vs. TrEMBL
Match: A0A0A0KHE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 136/164 (82.93%), Postives = 146/164 (89.02%), Query Frame = 1 

Query: 102 AKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGV 161
           AK+WFAM DS KEG LRFLRPLYLSNFKFT+EAL  E+N LEFRI ELAK YM+VNTEGV
Sbjct: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80

Query: 162 CVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYR 221
           CVSEIRKV+MFPDSPWIDTKNC V AIF +GKLG+ KL DEKWTMIE+ NFARGDVIVYR
Sbjct: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140

Query: 222 GKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGE 266
           GKFYAVD+RG VFS+DSSSMEL QIS PMS FGKQKHLVECGGE
Sbjct: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]
BLAST of Lsi01G005540 vs. TrEMBL
Match: A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-70
Identity = 169/375 (45.07%), Postives = 228/375 (60.80%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+ +  R SDL P+LW  IGK LD YID++R R VCRS RAS P  +A+S L PL L S 
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPL-LVSH 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKV---WFAMVDSPKEGEL 120
           P     DH +++ L+ R+IIY  SPL  +QT+   SSS+++++    W A V++   G+L
Sbjct: 61  P----FDHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKL 120

Query: 121 RFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPW 180
           RFL PL     K   +  + E+NLL+FRIHE+AKSY++ +T G  +  I KV++FPDS W
Sbjct: 121 RFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIG-GILFINKVVVFPDSAW 180

Query: 181 IDTKNCAVL-AIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSI 240
           ID K  +++ A+   GKLGY K+ D KWT+I   NF   D+IVY G+ Y VD+ G VF I
Sbjct: 181 IDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLI 240

Query: 241 DSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSD 300
           D SSM+L+QISP +     +KHL+ECGGE+YVVDRF                  +  D +
Sbjct: 241 D-SSMKLVQISPELGVISNEKHLIECGGEIYVVDRF----------------LEQKKDPE 300

Query: 301 SSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSV 360
              S  D     E      DF+V+R+D       R +E VKNLGN A ++G+   NSFSV
Sbjct: 301 LLNSWFD-----EPMPRVVDFKVHRLDQEIMGKSRWVE-VKNLGNRAFVVGH---NSFSV 343

Query: 361 SATDFEGIQGNCIYY 372
           SA DFEG + NCIY+
Sbjct: 361 SAADFEGFKENCIYF 343

[Close]
BLAST of Lsi01G005540 vs. TrEMBL
Match: A0A0A0KLM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.8e-60
Identity = 158/383 (41.25%), Postives = 212/383 (55.35%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           MDD     S+L PE+W A+GKHL  YIDVLR R VCRS R+S PPF   SP LPL  PS 
Sbjct: 26  MDDAGVPWSELPPEIWPAVGKHLHNYIDVLRFRSVCRSWRSSLPPFSQTSPPLPLPFPSP 85

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVW-FAMVDSPKEGELRF 120
             +           L++  +YR  PL+   T N  SSS+          V+  + G++RF
Sbjct: 86  YISPTLP---LHAFLSQTTLYRLGPLNHQPTPNLSSSSSPTPPNGRLVKVEKSELGKMRF 145

Query: 121 LRPLYLSNFKFTYEALQD------EMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFP 180
           L PL   + K     L+D      E NLL  RIHELA SY +  T+  CV  I K+++FP
Sbjct: 146 LHPL---SKKIIPRNLEDPSEGHNEFNLLHLRIHELAVSYSLKYTDTTCVPGISKIVLFP 205

Query: 181 DSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIV 240
           +S   D K+C ++A+F  GKLG+A+  DEKWT+I+E+NF   DVIVY  ++Y VD+ G V
Sbjct: 206 NSSGSDVKDCTIIAVFEGGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTV 265

Query: 241 FSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRF----DDFSDSEDEVDDGGDNY 300
           F ID  SM L+Q SPP+   G QKHLVECGGE+ V+DRF      F      V+D     
Sbjct: 266 FWID-LSMRLVQFSPPLIGLGHQKHLVECGGELLVIDRFLNKERHFQPVIAAVEDA---- 325

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLN-GEYCRRGLEVVKNLGNEAIILGN 360
            E              +      +  DF+ Y++D   G +       +KNL N++IILGN
Sbjct: 326 -EVQQQQQPFIIPVRHTPYNSLPKAVDFKAYKLDQEWGTWVE-----LKNLRNQSIILGN 385

Query: 361 KRENSFSVSATDFEGIQGNCIYY 372
             +  FS+ A++FEG + NC+YY
Sbjct: 386 --DCCFSIEASEFEGCKKNCVYY 389

[Close]
BLAST of Lsi01G005540 vs. TrEMBL
Match: G7LA96_MEDTR (F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53
Identity = 142/371 (38.27%), Postives = 197/371 (53.10%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  ELW  IGK+LD +IDVLR R VC S R+S PP    SP  PL +P         H
Sbjct: 27  SQLPIELWPKIGKYLDNHIDVLRFRSVCESFRSSIPPSHPNSPSFPLQIP---------H 86

Query: 69  PVKEIL---LARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGELRFLRPLYL 128
           PV   L   + +  +Y   P D    +N    + +++K W   V+  K   +  L P+  
Sbjct: 87  PVYNSLNNYVNQSTVYIIEPTDASSNSNLEPLAPSSSKGWLIKVEETKNQPVSLLSPI-- 146

Query: 129 SNFKFTYEALQDEM-----NLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDT 188
           S+ K +Y    +       NLL++R+ EL KSY I  T     S I KV  +P+SPW   
Sbjct: 147 SDRKLSYPLSNNNTSPMLWNLLDYRVIELCKSYKIEKTTPFSSSAI-KVAFYPNSPWTSV 206

Query: 189 KNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSS 248
           ++C    IF  GKLG  K  DEKWT+++++NF   D+IV++G+FY  DK G +  ID S+
Sbjct: 207 EDCVACCIFQEGKLGLMKHGDEKWTLVDDKNFYYDDIIVFKGQFYVTDKWGTISWIDVST 266

Query: 249 MELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSES 308
           + L+Q SPP+  FG +KHL+E  G +YVVDR+ + S      DD G NY           
Sbjct: 267 LRLIQFSPPLCGFGNKKHLMESCGSLYVVDRYYEIS------DDMGRNYVRR------RY 326

Query: 309 DSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATD 368
           D D+D E         F+VY++D   E   + ++ VKNL + A IL   +  +FSVS  D
Sbjct: 327 DRDTDVEC--------FKVYKLD---EEWGKWVD-VKNLRDRAFIL--SKSCNFSVSTKD 359

Query: 369 FEGIQGNCIYY 372
             G QGNCIY+
Sbjct: 387 LIGYQGNCIYF 359

[Close]
BLAST of Lsi01G005540 vs. TAIR10
Match: AT1G65770.1 (AT1G65770.1 ascorbic acid mannose pathway regulator 1)

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-19
Identity = 98/375 (26.13%), Postives = 163/375 (43.47%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL---PNNDD 68
           S L  +L   I   L + I++ R R +CRS R+S P     +P     L  L   PN   
Sbjct: 5   STLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKPL 64

Query: 69  ADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVD-SPKEGELRFLRPLY 128
            DH  +   L+R   +R            V+ S++ ++ W    D     G+L  L PL 
Sbjct: 65  TDHRRRGEFLSRSAFFR------------VTLSSSPSQGWLIKSDVDVSSGKLHLLDPLS 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMIVN--TEGVCVSEIRKVIMFPDSPWIDTKN 188
               +   E  +  ++L EF I E+ ++Y + +  T        ++V +  D    +   
Sbjct: 125 ----RLPMEHSRKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ-- 184

Query: 189 CAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSSSME 248
             VL I   GK+ Y  ++  K    +E  +   D+IV++G+ YA+D  GIV+ I  S ++
Sbjct: 185 --VLGIRSTGKMMYWDIKTWK---AKEEGYEFSDIIVHKGQTYALDSIGIVYWI-RSDLK 244

Query: 249 LLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSDSSESDS 308
            ++  P +  +   + LVEC GE Y+V+R    S  + + DD G  Y             
Sbjct: 245 FIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEY------------- 304

Query: 309 DSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSVSATDFE 368
                     +   F+VY+ D      +  +  VK+LG++A ++    +  FSV A +F 
Sbjct: 305 ---------AKTVGFKVYKFDDE----QGKMMEVKSLGDKAFVIAT--DTCFSVLAHEFY 327

Query: 369 GIQGNCIYYPRRTMM 378
           G   N IY+   TM+
Sbjct: 365 GCLENAIYFTDDTMI 327

[Close]
BLAST of Lsi01G005540 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-16
Identity = 73/273 (26.74%), Postives = 129/273 (47.25%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  +L   I K L++  D+++ R VC S R++  P    SPL   HLP LP+N  +  
Sbjct: 5   STLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP---KSPLPTHHLPILPDNGGSLF 64

Query: 69  PVKEI--LLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKE--GELRFLRPLY 128
           P   +   L+++ I    P +    +++          W   V+       ++  L PL 
Sbjct: 65  PDSAVGFRLSQRSILLIKPHEPCIESDSFG--------WLIKVEEDLNVPRKVTLLDPLC 124

Query: 129 LSNFKFTYEALQDEMNLLEFRIHELAKSYMI--VNTEGVCVSEI---RKVIMFPDSPWID 188
            +      E     +++ +F++ EL + + +   NT G  V  +   + V+ + D    D
Sbjct: 125 DTRNSIP-ENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDG-D 184

Query: 189 TKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSIDSS 248
            K   +L I  +GKL   +  D  WT+I +      DV+++ G+F+AVD  G    +D S
Sbjct: 185 YK-FVLLTIHVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYS 244

Query: 249 SMELLQISPPMSCFGKQKHLVECGGEVYVVDRF 273
           S++L  ++ P+   G +K L+E  GE+ +VD +
Sbjct: 245 SLKLTLVASPV-FGGDKKFLIESCGEMLLVDMY 262

[Close]
BLAST of Lsi01G005540 vs. TAIR10
Match: AT2G26160.1 (AT2G26160.1 F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-09
Identity = 67/281 (23.84%), Postives = 118/281 (41.99%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S+L  +L         +  DVLR R +C+  R++     A       +LPS      ++ 
Sbjct: 7   SELPGDLINLTANRFSSISDVLRVRSICKPWRSAA----ATPKSFQCNLPS------SNK 66

Query: 69  PVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEG-ELRFLRPLYLSN 128
            ++ +L         SP   ++ T     S+ + K W        E  ++  L P     
Sbjct: 67  MIETVL---------SPTTFFRVTGP---SSCSYKGWLIRTKQVSESSKINLLSPF---- 126

Query: 129 FKFTYEALQDEMNLLEFRIHELAKSYMI-----------VNTEGVCVSEIRKVIMFPDSP 188
           F+      Q  ++LL+F + E+ +SY I           +  EG   S I   ++F D+ 
Sbjct: 127 FRQLLTPSQQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGP--SHILSRVVFLDN- 186

Query: 189 WIDTKNCAVLAIFGNGKLGYAKLRDEK---WTMIEERNFARGDVIVYRGKFYAVDKRGIV 248
                   + A+  + K+   K  +E    WT I+ +     D+I+++G+ YA+D  G +
Sbjct: 187 -------LIFAVGQDDKIWCCKSGEESSRIWTKIKNQVEDFLDIILHKGQVYALDLTGAI 246

Query: 249 FSIDSSSMELLQISP--PMSCFGK---QKHLVECGGEVYVV 270
           + I  S + LLQ +P  PM   G     K LVE  G++ ++
Sbjct: 247 WWISLSPLSLLQFTPSIPMDYDGYDSCNKRLVEYCGDLCII 251

[Close]
BLAST of Lsi01G005540 vs. TAIR10
Match: AT1G64840.1 (AT1G64840.1 Protein of unknown function (DUF295))

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-08
Identity = 66/280 (23.57%), Postives = 127/280 (45.36%), Query Frame = 1 

Query: 9   SDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNNDDADH 68
           S L  EL   I K+LD   DV+  R +CRS R++F PF +    L   LP+      A  
Sbjct: 6   SQLPEELLNLISKNLDNCFDVVHARSICRSWRSAF-PFPSSLSTLSYSLPTF-----AKF 65

Query: 69  PV--KEILLARKI-IYRFSPLDIYQTTNAVSSSTAAAKVWFAMVDSPKEGE-LRFLRPLY 128
           P+  K++   +KI I+ F          A + +    + +   +D  +  + +    PL 
Sbjct: 66  PLVSKDLCTLKKIQIFLF---------RARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 125

Query: 129 LS-NFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPWIDTKNC 188
            S   KF  ++    +N+L+++I  L   Y+++  +   ++     + F           
Sbjct: 126 CSVKVKFP-QSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAFLPVKKNGGDEF 185

Query: 189 AVLAIFGNGKLGYAKLRDEKWTMIEERNFAR-GDVIVYRGKFYAVDKRGIVFSIDSSSME 248
            VL  + N  L   +  + +W  +++ + A    ++ +RG+FY     G ++  D  S+E
Sbjct: 186 VVLLRYRNHLL-VLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDPYSLE 245

Query: 249 --LLQISPPMSCFGKQKHLVECGG-EVYVVDRFDDFSDSE 280
             LL  S P+      K+L+  G  E+++V++F+ F +++
Sbjct: 246 QTLLMPSEPLR---SSKYLIPNGSDELFLVEKFNPFPEAD 265

[Close]
BLAST of Lsi01G005540 vs. TAIR10
Match: AT2G16300.1 (AT2G16300.1 F-box family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 78/302 (25.83%), Postives = 123/302 (40.73%), Query Frame = 1 

Query: 11  LLP-ELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSLPNN------ 70
           LLP +L   I  HL+T  +++  R VC S R+  PP D  S  L +    +  N      
Sbjct: 6   LLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQ-SRCLSIKTHDISFNAGFSFS 65

Query: 71  -DDADHPVKEILLARKIIYR---------------------------FSPLDIYQTTNAV 130
               DHP+    L +  IY                             SPL    ++N +
Sbjct: 66  GQPTDHPLFGSTLTKIPIYLVKFWTPFGDDYLLAEMREREGGEPMFLLSPL----SSNRI 125

Query: 131 SSSTAAAKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMI 190
                  KV F  + SP            +  F   YE    E   + +R       ++ 
Sbjct: 126 IYGMGINKVLFNSLTSP------------IIPFGQYYEITYSEKQPIRYRYG--LPCHLW 185

Query: 191 VNTEGVCVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEER--NFA 250
              E V ++E R   +  DS   D+++ AVL       L   + R+  WT + E    +A
Sbjct: 186 DKLEWVEITE-RVEFLKLDSE--DSRDFAVLFAGRMCNLVMYRSRNMSWTQVVEHPEKYA 245

Query: 251 RGDVIVYRGKFYAVDK--RGIVFSIDSSSMELLQI-SPPMSCFGKQKHLVECGGEVYVVD 273
             D++ ++GKFYA+D   RG VF ++  S+E+++I S   S    +++LV  G E+ +V 
Sbjct: 246 YQDLVAFKGKFYALDSSGRGRVFVVE-LSLEVMEIPSVRGSQQSSKENLVLSGEELLLVQ 284

[Close]
BLAST of Lsi01G005540 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 6.3e-85
Identity = 193/379 (50.92%), Postives = 245/379 (64.64%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTA--------AAKVWFAMVDSP 120
                ADH + +  L R+IIYR SPLD ++T +  SSST+        AA+ W A V+S 
Sbjct: 61  VFA--ADH-LTDAFLIRRIIYRLSPLDHHKTFSFASSSTSSSSSSSYCAAEGWLAKVEST 120

Query: 121 KEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMF 180
           K G++RFL PL     K   +  + E+NLL+F I+E+AKSY +  T G  V  I KV+MF
Sbjct: 121 KLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGSPVPRITKVVMF 180

Query: 181 PDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGI 240
           PDSPWID K C +LA++  GKLG+AK  D+KWT+I+ RNF   DVIVY+G+FYAVD+ G 
Sbjct: 181 PDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYKGQFYAVDRWGT 240

Query: 241 VFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNEN 300
           VF IDSS M L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++  N
Sbjct: 241 VFWIDSS-MRLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHWLNN 300

Query: 301 DDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKREN 360
              DS               +  DF+++R+D   +   R +EV KNLGN++ ILGN  + 
Sbjct: 301 LIEDSPP-------------KVIDFKLHRLD---QEWGRWVEV-KNLGNQSFILGN--DC 356

Query: 361 SFSVSATDFEGIQGNCIYY 372
            FSVS  +FEG++G+CIY+
Sbjct: 361 CFSVSTPNFEGLKGSCIYF 356

[Close]
BLAST of Lsi01G005540 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 192/382 (50.26%), Postives = 245/382 (64.14%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+D+  R SDL PELW  IGK LDTYIDVLR R VCRS RAS PPF+AVSPLLPL LPS 
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRFRSVCRSWRASLPPFNAVSPLLPLDLPSP 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAA-----------AKVWFAMV 120
                ADH + +  L R+IIYR SPLD +QT +  SSS+++           A+ W A V
Sbjct: 61  VFA--ADH-LTDAYLIRRIIYRLSPLDHHQTFDFASSSSSSSSSSSSSFSCPAEGWLAKV 120

Query: 121 DSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKV 180
           +S K G++RFL PL     K   + L+ E+NLL+F I+E+AKSY +  T G  V  I KV
Sbjct: 121 ESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKV 180

Query: 181 IMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDK 240
           +MFPDSPWID K C +LAI+  GKLG+AK  D KWT+I+  NF   DVIVY+G+FYAVD+
Sbjct: 181 VMFPDSPWIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDR 240

Query: 241 RGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNY 300
            G +F ID SSM+L+Q SPP+  FG QKHLVEC GE+YVVDRF D        D    ++
Sbjct: 241 WGTIFWID-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLDKEPLLWNADIFHIHW 300

Query: 301 NENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNK 360
             N   DSS              +  DF+++R+D   +   R +E VKNLGNE+ +LGN 
Sbjct: 301 LNNLIEDSS-------------PKVIDFKLHRLD---QEWGRWVE-VKNLGNESFVLGN- 359

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FSVS   F+G++G+CIY+
Sbjct: 361 -DCCFSVSTPYFKGLKGSCIYF 359

[Close]
BLAST of Lsi01G005540 vs. NCBI nr
Match: gi|700193764|gb|KGN48968.1| (hypothetical protein Csa_6G507410 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 136/164 (82.93%), Postives = 146/164 (89.02%), Query Frame = 1 

Query: 102 AKVWFAMVDSPKEGELRFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGV 161
           AK+WFAM DS KEG LRFLRPLYLSNFKFT+EAL  E+N LEFRI ELAK YM+VNTEGV
Sbjct: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80

Query: 162 CVSEIRKVIMFPDSPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYR 221
           CVSEIRKV+MFPDSPWIDTKNC V AIF +GKLG+ KL DEKWTMIE+ NFARGDVIVYR
Sbjct: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140

Query: 222 GKFYAVDKRGIVFSIDSSSMELLQISPPMSCFGKQKHLVECGGE 266
           GKFYAVD+RG VFS+DSSSMEL QIS PMS FGKQKHLVECGGE
Sbjct: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]
BLAST of Lsi01G005540 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 5.7e-70
Identity = 169/375 (45.07%), Postives = 228/375 (60.80%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPSL 60
           M+ +  R SDL P+LW  IGK LD YID++R R VCRS RAS P  +A+S L PL L S 
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRFRSVCRSWRASLPQLNAISLLSPL-LVSH 60

Query: 61  PNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKV---WFAMVDSPKEGEL 120
           P     DH +++ L+ R+IIY  SPL  +QT+   SSS+++++    W A V++   G+L
Sbjct: 61  P----FDHRIEDALVIRRIIYGTSPLRHHQTSTYPSSSSSSSRASAGWLAKVETTNLGKL 120

Query: 121 RFLRPLYLSNFKFTYEALQDEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPDSPW 180
           RFL PL     K   +  + E+NLL+FRIHE+AKSY++ +T G  +  I KV++FPDS W
Sbjct: 121 RFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIG-GILFINKVVVFPDSAW 180

Query: 181 IDTKNCAVL-AIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVFSI 240
           ID K  +++ A+   GKLGY K+ D KWT+I   NF   D+IVY G+ Y VD+ G VF I
Sbjct: 181 IDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFLI 240

Query: 241 DSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDDFSDSEDEVDDGGDNYNENDDSD 300
           D SSM+L+QISP +     +KHL+ECGGE+YVVDRF                  +  D +
Sbjct: 241 D-SSMKLVQISPELGVISNEKHLIECGGEIYVVDRF----------------LEQKKDPE 300

Query: 301 SSESDSDSDSESEEEEEEADFEVYRVDLNGEYCRRGLEVVKNLGNEAIILGNKRENSFSV 360
              S  D     E      DF+V+R+D       R +E VKNLGN A ++G+   NSFSV
Sbjct: 301 LLNSWFD-----EPMPRVVDFKVHRLDQEIMGKSRWVE-VKNLGNRAFVVGH---NSFSV 343

Query: 361 SATDFEGIQGNCIYY 372
           SA DFEG + NCIY+
Sbjct: 361 SAADFEGFKENCIYF 343

[Close]
BLAST of Lsi01G005540 vs. NCBI nr
Match: gi|659072629|ref|XP_008466513.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 161/382 (42.15%), Postives = 220/382 (57.59%), Query Frame = 1 

Query: 1   MDDTSARCSDLLPELWTAIGKHLDTYIDVLRCRGVCRSLRASFPPFDAVSPLLPLHLPS- 60
           MDD     S+L PE+W A+GKHL TYIDVLR R VCRS R+S PPF   SP LPL  PS 
Sbjct: 1   MDDAGVPWSELPPEIWPAVGKHLHTYIDVLRFRSVCRSWRSSLPPFTQTSPPLPLRFPSP 60

Query: 61  -LPNNDDADHPVKEILLARKIIYRFSPLDIYQTTNAVSSSTAAAKVW-FAMVDSPKEGEL 120
            +  N   D       L++ IIYR +PL+   + N  SSS+   +      V+  + G++
Sbjct: 61  YISANLSVD-----AFLSQTIIYRLAPLNHEPSPNVSSSSSPPPRNGRLVKVEKSELGKM 120

Query: 121 RFLRPLYLSNFKFTYEALQ---DEMNLLEFRIHELAKSYMIVNTEGVCVSEIRKVIMFPD 180
           RFL PL     +   E L    +E+NLL+ R+ ELA SY +  ++  CV  I K+++FP+
Sbjct: 121 RFLHPLSKQIIRCNLEDLSQGHNELNLLDLRMDELAVSYSLKYSDTTCVPGISKIVVFPN 180

Query: 181 SPWIDTKNCAVLAIFGNGKLGYAKLRDEKWTMIEERNFARGDVIVYRGKFYAVDKRGIVF 240
           S   D K+C ++A+F  GKLG+A+  DEKWT+I+E+NF   DVIVY  ++Y VD+ G VF
Sbjct: 181 SSGSDVKDCTIIAVFECGKLGFARSGDEKWTLIDEQNFHYDDVIVYNQQYYTVDRWGTVF 240

Query: 241 SIDSSSMELLQISPPMSCFGKQKHLVECGGEVYVVDRFDD----FSDSEDEVDDGGDNYN 300
            ID SSM L+Q SPP+   G  KHLVECGGE+ V+DRF D    F  +   VDD     +
Sbjct: 241 WID-SSMRLVQFSPPLIGLGHHKHLVECGGELLVIDRFLDKERHFQPAIAAVDDAEQQQH 300

Query: 301 ENDDSDSSESDSDSDSESEEEEEEADFEVYRVDLN-GEYCRRGLEVVKNLGNEAIILGNK 360
                      S          +  DF+ Y++D   G +       +KNLGN +IILGN 
Sbjct: 301 HFMIPVQRPPYSSL-------PKAVDFKAYKLDQEWGTWVE-----LKNLGNRSIILGN- 360

Query: 361 RENSFSVSATDFEGIQGNCIYY 372
            +  FS+ A++FEG + NC+YY
Sbjct: 361 -DCCFSIEASEFEGCKKNCVYY 362

The following BLAST results are available for this feature:
BLAST of Lsi01G005540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB72_ARATH5.1e-1826.13Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1[more]
SKI23_ARATH3.1e-1526.74F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1[more]
FB117_ARATH4.7e-0823.84F-box protein At2g26160 OS=Arabidopsis thaliana GN=At2g26160 PE=2 SV=1[more]
FBK27_ARATH1.8e-0723.57F-box/kelch-repeat protein At1g64840 OS=Arabidopsis thaliana GN=At1g64840 PE=2 S... [more]
FB187_ARATH2.0e-0622.88Putative F-box protein At3g25750 OS=Arabidopsis thaliana GN=At3g25750 PE=4 SV=2[more]
BLAST of Lsi01G005540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJJ1_CUCSA8.2e-8450.26Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1[more]
A0A0A0KHE7_CUCSA2.9e-7382.93Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507410 PE=4 SV=1[more]
A0A0A0KGT9_CUCSA4.0e-7045.07Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1[more]
A0A0A0KLM6_CUCSA2.8e-6041.25Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1[more]
G7LA96_MEDTR2.0e-5338.27F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1[more]
BLAST of Lsi01G005540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65770.12.8e-1926.13 ascorbic acid mannose pathway regulator 1[more]
AT2G17030.11.7e-1626.74 F-box family protein with a domain of unknown function (DUF295)[more]
AT2G26160.12.7e-0923.84 F-box family protein with a domain of unknown function (DUF295)[more]
AT1G64840.11.0e-0823.57 Protein of unknown function (DUF295)[more]
AT2G16300.11.9e-0725.83 F-box family protein[more]
BLAST of Lsi01G005540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081066|ref|XP_008441132.1|6.3e-8550.92PREDICTED: F-box protein At2g17036 [Cucumis melo][more]
gi|778719846|ref|XP_004134837.2|1.2e-8350.26PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]
gi|700193764|gb|KGN48968.1|4.2e-7382.93hypothetical protein Csa_6G507410 [Cucumis sativus][more]
gi|449434450|ref|XP_004135009.1|5.7e-7045.07PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]
gi|659072629|ref|XP_008466513.1|1.0e-6342.15PREDICTED: putative F-box protein At1g65770 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005174DUF295
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G005540.1Lsi01G005540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 336..371
score: 5.8
NoneNo IPR availableunknownCoilCoilcoord: 132..152
scor
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 17..296
score: 4.6E-24coord: 313..371
score: 4.6
NoneNo IPR availablePANTHERPTHR11102:SF101SUBFAMILY NOT NAMEDcoord: 17..296
score: 4.6E-24coord: 313..371
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G005540Wax gourdlsiwgoB149
Lsi01G005540Wax gourdlsiwgoB168
Lsi01G005540Bottle gourd (USVL1VR-Ls)lsilsiB078
Lsi01G005540Bottle gourd (USVL1VR-Ls)lsilsiB081
Lsi01G005540Cucumber (Gy14) v1cgylsiB022
Lsi01G005540Cucumber (Gy14) v1cgylsiB527
Lsi01G005540Cucurbita maxima (Rimu)cmalsiB306
Lsi01G005540Cucurbita maxima (Rimu)cmalsiB407
Lsi01G005540Cucurbita maxima (Rimu)cmalsiB517
Lsi01G005540Cucurbita maxima (Rimu)cmalsiB597
Lsi01G005540Cucurbita maxima (Rimu)cmalsiB786
Lsi01G005540Cucurbita moschata (Rifu)cmolsiB293
Lsi01G005540Cucurbita moschata (Rifu)cmolsiB393
Lsi01G005540Cucurbita moschata (Rifu)cmolsiB502
Lsi01G005540Cucurbita moschata (Rifu)cmolsiB582
Lsi01G005540Cucurbita moschata (Rifu)cmolsiB774
Lsi01G005540Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G005540Cucurbita pepo (Zucchini)cpelsiB165
Lsi01G005540Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G005540Cucumber (Chinese Long) v2culsiB165
Lsi01G005540Wild cucumber (PI 183967)cpilsiB164
Lsi01G005540Wild cucumber (PI 183967)cpilsiB439
Lsi01G005540Cucumber (Chinese Long) v2culsiB434
Lsi01G005540Melon (DHL92) v3.5.1lsimeB146
Lsi01G005540Melon (DHL92) v3.5.1lsimeB156
Lsi01G005540Watermelon (Charleston Gray)lsiwcgB120
Lsi01G005540Watermelon (Charleston Gray)lsiwcgB127
Lsi01G005540Watermelon (97103) v1lsiwmB129
Lsi01G005540Watermelon (97103) v1lsiwmB144
Lsi01G005540Cucumber (Gy14) v2cgyblsiB150
Lsi01G005540Cucumber (Gy14) v2cgyblsiB398
Lsi01G005540Melon (DHL92) v3.6.1lsimedB152
Lsi01G005540Melon (DHL92) v3.6.1lsimedB163
Lsi01G005540Silver-seed gourdcarlsiB364
Lsi01G005540Silver-seed gourdcarlsiB585
Lsi01G005540Cucumber (Chinese Long) v3cuclsiB181
Lsi01G005540Cucumber (Chinese Long) v3cuclsiB462
Lsi01G005540Watermelon (97103) v2lsiwmbB115
Lsi01G005540Watermelon (97103) v2lsiwmbB118