Lsi01G005470.1 (mRNA) Bottle gourd (USVL1VR-Ls)

NameLsi01G005470.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 4428125 .. 4431890 (+)
Sequence length230
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTGATACTTTTTATTTTTCCTGAACCAACACTTCTTTTTGAGGAATGGGCCAAATCTGGCCATTTCTGGATAACGATAGTCGATAGCCAAGGTCCTGCTACTACTGCTACTGCTAGTGCTTCGATCTGAAATCTTGATGCTGACTTGTTTTCTCAAGAGTGGGACAATGGTGAAGAGAAATATTCTTAGATTGGATACATATATATTGTGCTTTTAATGATATAGCCTAGCTTGCAGCTTTAGTAGCTTAATACAGTCACATTTTAAGTCATAATTGAATGTAATAAGATAGTGATTATAGACGAATAATCTTGGGTTGGATTAGAATCAAGGATTCGATAATTTTGGAGTGATCTATTCTTGGGTATAGCTTCCCTTCCACTGCCCATTTTGGTTCCTATATTAGTCTGAACTGACATTTTCTTGCACCAAATTCTTTTGCCGCCAAATCTCACGTTTCTAGTTCCTGTGGTTTAGGCTTTGAGCATTTGTCTTGCTGATGAAAAAAGGGGTTTAGTGGAAACTTGATGAAGCTTGAAAGACGGTGAAAGCCAGGGTTAACAGAGGGTTCTGGGTAAATGTTCCTGGCTCAAACATTGGCAGAAGAAAGAATATGGATTCAAATTCTCATCAAGGTCTGTACTTTCTGTGTAAAAGTGTTGTCCTACAACCTCGATTCTTTGCTGATGTTCCCTTCTCTTTGCTGCCTTCACCAGGGCTTCTTACTGCTTGATGCAATTTTTGGAATTGGAATCATTCACCATTATTTTACCCTCACTATGCCATTGATCTGTTATGCAAAGTTTTGCTGATTGTACGTAGTCTTTTGTGTTTTTAGTGTATTTCAGAAACAATTGGGCCGAGAAGCTATACAATAAGTGTTTATTATGTATCTGATCAATGTAATTCATTGTTATTTAGTGATACAAAACACTTATTTCACCATGTTCTTCTATAATTATGTTCAAACCTTACTACCATACATACAATTATGCCAATTTTATTTGAAAATATCTCGATGCACCCACTTATTTCTAATACTATTAATTTTAATTAAAATTTTATTCTAGCCTCCTCATTGCTTTATTTATTTGTTTCTTTTGAGATAAACAGGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGATCGAGGTATATCTCAGTAATTGATTACAAATTTATATGATTCATTTATGATAATTAATATATGATCACACTGTACTGTTAAACTAACAAAATTATTGATAAATTACAAATTTTGATCGAGATAAATCATAAGCAAAAACTAACAATATATCATACTTTTTCTCCAGTTTAAAATAGAGCAAATTTATTTTTTAATGATTTATTATCTTAATCATAAAGTATTTAATGAACTCTCAAATATTAGAGGCTAAAACGTATACTCATTCTTATTTTATAATATGCAATACCTTTGTTCTACGAATGATCTTCTATAATACACAACCGCGATGGATGAGTATATGAGATTAGCGGTGGATAAGTACTATCATAATATAACAAGATGTTAAGTAATACATATGGGTATGTGATTATATTTTGGTTGGTAAGGTAACAAGATCTTGAAAAATAACTGGCAAAAATTTGAAACTTTTGCCAAAATATCTTTCATCAGATCACAAAGCCTGACAAAACCACAATATTGTTTGGTTTGGTTCATTGCTCTGTAAAACCAATTTTTTAAAGATATTTGTAAGAATTGTGATGGAATGAGTTTTGAAAATTAACAAGGTTCATTGTGTGTAACTATTAATAACAAAACACTTTCAATTATTAGTATTATTTTTTTTAAGACAGATCACTTTGTAGAAACAAAGCTCTAGATTCTTGGTGATTTTTAGGCCAATAAACATTATTTGTATAATCTCTAGTGGTCAAATGGAATTGATTCATGTGGATTTTTTTTTATCTTTTTTCCTTTCAAAAATGGGGAGACAGTCATTCATTTGCCAGGCTTTAATGTTGAGAACCCACATTGCAAAACCAAGCCATATGGTTTAATAAATAGAAAAAATATGTATATATATTTTGAGTAGTATGAGTTGGAATATATTTATAATAAGGAGACAAAGAGGCAATGGAAGGTGTTTAATTAAATTTTAGGTTATAATGTGAATGAATCATTATTTTTTGTACATTTGTACGTTTGTCACTCTCTCTATGGGATCCGTACGTTAAAATGAAATCTTTTTGGATGGTTGACCTAATCTTGTGGCTACAAGATTACATGAAGAATTTGCCCACATGCTTATACCCCACCTCCATTTATTCATGTTCTTAAATTTGGTGACTCGAGCTAACTATTCAAACGTTTTGTTCTATTGATCCAAACGTAATATTCGTAGTCAAGTGTTGGTGTTCTATTGATCCAAAAGTAACATTAGTGGCGTCGGATCCAGGTTTTGAATCCTGCAAACCCTTTCATGCATATATTCTCTGTGCCCTTCATACCAATACAACATTCAAATTTTATGATACTTAAGATGAATGTATATACATAAATATGTATATATGTATATATGTATATATATTTTGGGGGACATACCCTTCATGGCCCCTATGTGGATCGATCTGCTCTTGTTTCTTTTTTATCCAAATGTAACATTTGTCGTCAAACATTGGAGATATAATGTTTTAGAGACATTGGTTAATAATTTGTGGATGATATAACTTGACTAGTAGTTCTAGCCATACACAAGGACGATACAAGATTCTCTAGAATAAAGCTCTAGTAGAGATAAAAATTATTCGATGAGACTATCACAATGTAGTTGCTTCATAATAATTGTGAGACGCAGATTCGAAAATCTACCTACCTCCTAATAACTATTAAATATAAATTCGAAATGGTTTCTCTTCATACATTTAGCATTGTAAAACTTACGGATCATATTGCGGTGATTTTTCTCAAATAATTTTTGTTAATAGTGTTGGGAGTTCTCAATCTAGTAGAGACAACATAGAGAATACATCCCCTATTTTCATATTTGAAATGACTACACAGACACATATATATGATAATAAAATCTTTAAAGTAATTAAAATGTAGTGTAGTTTTCTAAATGTTTAACTTTTTAATTGTGAATTCATAATATTTACATTTTGTATAAAGATGGCATAATCCCGACTCCATGCAGTAATTATTTGGTTTTAAAAAATTAAGTTCATCAACATTATTCCTACTCATAAATTTTATTTTCTAATCCACTTTTTACTTATATTTTTAAAAACCAATACAAATTTTTTAACACTAAAAAAAGCATTCAAAATTGAACTTAAAATATTTTGCAAAAACCATAATTTAAAACGAGAGAAAATATACATAAAATTAAAATAAATAAATAAACAGAAAAACTAGTAACAAAATGGTTATGAAATGGAATCTAAATAAACACTAAATTTAAATTCTTGAAATCTATGAACAATACACGTAATGATATTTTTTGATTCATAAATGCTACTCAAGTTCAAGTCCACTCTTAGAACTTCTGACAAAGAATTTTGTTTTCTCGTTCATTTTTTATGTGAACTGATAATAGAATCATAGATCGATGATGCTTACGCTATTCTTATTGTCTTTGAAGGCAATGGATTTGCATTTCATTCAAATTCATGCACCTTAT

mRNA sequence

ATGTCAAACAATTGGGCCGAGAAGCTATACAATAAGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGATCGAGGCAATGGATTTGCATTTCATTCAAATTCATGCACCTTAT

Coding sequence (CDS)

ATGTCAAACAATTGGGCCGAGAAGCTATACAATAAGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGA

Protein sequence

MSNNWAEKLYNKQNIPLNENEKLLRSTPARTITRKDLNIYTLFFRHKHQTHGVSIKIDLFD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi01G005470Lsi01G005470gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi01G005470.1.CDS.1Lsi01G005470.1.CDS.1CDS
Lsi01G005470.1.CDS.2Lsi01G005470.1.CDS.2CDS
Lsi01G005470.1.CDS.3Lsi01G005470.1.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi01G005470.1.three_prime_UTR.1Lsi01G005470.1.three_prime_UTR.1three_prime_UTR
Lsi01G005470.1.three_prime_UTR.2Lsi01G005470.1.three_prime_UTR.2three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi01G005470.1Lsi01G005470.1-proteinpolypeptide