Lsi01G005470 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi01G005470
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr01 : 4428125 .. 4431890 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTGATACTTTTTATTTTTCCTGAACCAACACTTCTTTTTGAGGAATGGGCCAAATCTGGCCATTTCTGGATAACGATAGTCGATAGCCAAGGTCCTGCTACTACTGCTACTGCTAGTGCTTCGATCTGAAATCTTGATGCTGACTTGTTTTCTCAAGAGTGGGACAATGGTGAAGAGAAATATTCTTAGATTGGATACATATATATTGTGCTTTTAATGATATAGCCTAGCTTGCAGCTTTAGTAGCTTAATACAGTCACATTTTAAGTCATAATTGAATGTAATAAGATAGTGATTATAGACGAATAATCTTGGGTTGGATTAGAATCAAGGATTCGATAATTTTGGAGTGATCTATTCTTGGGTATAGCTTCCCTTCCACTGCCCATTTTGGTTCCTATATTAGTCTGAACTGACATTTTCTTGCACCAAATTCTTTTGCCGCCAAATCTCACGTTTCTAGTTCCTGTGGTTTAGGCTTTGAGCATTTGTCTTGCTGATGAAAAAAGGGGTTTAGTGGAAACTTGATGAAGCTTGAAAGACGGTGAAAGCCAGGGTTAACAGAGGGTTCTGGGTAAATGTTCCTGGCTCAAACATTGGCAGAAGAAAGAATATGGATTCAAATTCTCATCAAGGTCTGTACTTTCTGTGTAAAAGTGTTGTCCTACAACCTCGATTCTTTGCTGATGTTCCCTTCTCTTTGCTGCCTTCACCAGGGCTTCTTACTGCTTGATGCAATTTTTGGAATTGGAATCATTCACCATTATTTTACCCTCACTATGCCATTGATCTGTTATGCAAAGTTTTGCTGATTGTACGTAGTCTTTTGTGTTTTTAGTGTATTTCAGAAACAATTGGGCCGAGAAGCTATACAATAAGTGTTTATTATGTATCTGATCAATGTAATTCATTGTTATTTAGTGATACAAAACACTTATTTCACCATGTTCTTCTATAATTATGTTCAAACCTTACTACCATACATACAATTATGCCAATTTTATTTGAAAATATCTCGATGCACCCACTTATTTCTAATACTATTAATTTTAATTAAAATTTTATTCTAGCCTCCTCATTGCTTTATTTATTTGTTTCTTTTGAGATAAACAGGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGATCGAGGTATATCTCAGTAATTGATTACAAATTTATATGATTCATTTATGATAATTAATATATGATCACACTGTACTGTTAAACTAACAAAATTATTGATAAATTACAAATTTTGATCGAGATAAATCATAAGCAAAAACTAACAATATATCATACTTTTTCTCCAGTTTAAAATAGAGCAAATTTATTTTTTAATGATTTATTATCTTAATCATAAAGTATTTAATGAACTCTCAAATATTAGAGGCTAAAACGTATACTCATTCTTATTTTATAATATGCAATACCTTTGTTCTACGAATGATCTTCTATAATACACAACCGCGATGGATGAGTATATGAGATTAGCGGTGGATAAGTACTATCATAATATAACAAGATGTTAAGTAATACATATGGGTATGTGATTATATTTTGGTTGGTAAGGTAACAAGATCTTGAAAAATAACTGGCAAAAATTTGAAACTTTTGCCAAAATATCTTTCATCAGATCACAAAGCCTGACAAAACCACAATATTGTTTGGTTTGGTTCATTGCTCTGTAAAACCAATTTTTTAAAGATATTTGTAAGAATTGTGATGGAATGAGTTTTGAAAATTAACAAGGTTCATTGTGTGTAACTATTAATAACAAAACACTTTCAATTATTAGTATTATTTTTTTTAAGACAGATCACTTTGTAGAAACAAAGCTCTAGATTCTTGGTGATTTTTAGGCCAATAAACATTATTTGTATAATCTCTAGTGGTCAAATGGAATTGATTCATGTGGATTTTTTTTTATCTTTTTTCCTTTCAAAAATGGGGAGACAGTCATTCATTTGCCAGGCTTTAATGTTGAGAACCCACATTGCAAAACCAAGCCATATGGTTTAATAAATAGAAAAAATATGTATATATATTTTGAGTAGTATGAGTTGGAATATATTTATAATAAGGAGACAAAGAGGCAATGGAAGGTGTTTAATTAAATTTTAGGTTATAATGTGAATGAATCATTATTTTTTGTACATTTGTACGTTTGTCACTCTCTCTATGGGATCCGTACGTTAAAATGAAATCTTTTTGGATGGTTGACCTAATCTTGTGGCTACAAGATTACATGAAGAATTTGCCCACATGCTTATACCCCACCTCCATTTATTCATGTTCTTAAATTTGGTGACTCGAGCTAACTATTCAAACGTTTTGTTCTATTGATCCAAACGTAATATTCGTAGTCAAGTGTTGGTGTTCTATTGATCCAAAAGTAACATTAGTGGCGTCGGATCCAGGTTTTGAATCCTGCAAACCCTTTCATGCATATATTCTCTGTGCCCTTCATACCAATACAACATTCAAATTTTATGATACTTAAGATGAATGTATATACATAAATATGTATATATGTATATATGTATATATATTTTGGGGGACATACCCTTCATGGCCCCTATGTGGATCGATCTGCTCTTGTTTCTTTTTTATCCAAATGTAACATTTGTCGTCAAACATTGGAGATATAATGTTTTAGAGACATTGGTTAATAATTTGTGGATGATATAACTTGACTAGTAGTTCTAGCCATACACAAGGACGATACAAGATTCTCTAGAATAAAGCTCTAGTAGAGATAAAAATTATTCGATGAGACTATCACAATGTAGTTGCTTCATAATAATTGTGAGACGCAGATTCGAAAATCTACCTACCTCCTAATAACTATTAAATATAAATTCGAAATGGTTTCTCTTCATACATTTAGCATTGTAAAACTTACGGATCATATTGCGGTGATTTTTCTCAAATAATTTTTGTTAATAGTGTTGGGAGTTCTCAATCTAGTAGAGACAACATAGAGAATACATCCCCTATTTTCATATTTGAAATGACTACACAGACACATATATATGATAATAAAATCTTTAAAGTAATTAAAATGTAGTGTAGTTTTCTAAATGTTTAACTTTTTAATTGTGAATTCATAATATTTACATTTTGTATAAAGATGGCATAATCCCGACTCCATGCAGTAATTATTTGGTTTTAAAAAATTAAGTTCATCAACATTATTCCTACTCATAAATTTTATTTTCTAATCCACTTTTTACTTATATTTTTAAAAACCAATACAAATTTTTTAACACTAAAAAAAGCATTCAAAATTGAACTTAAAATATTTTGCAAAAACCATAATTTAAAACGAGAGAAAATATACATAAAATTAAAATAAATAAATAAACAGAAAAACTAGTAACAAAATGGTTATGAAATGGAATCTAAATAAACACTAAATTTAAATTCTTGAAATCTATGAACAATACACGTAATGATATTTTTTGATTCATAAATGCTACTCAAGTTCAAGTCCACTCTTAGAACTTCTGACAAAGAATTTTGTTTTCTCGTTCATTTTTTATGTGAACTGATAATAGAATCATAGATCGATGATGCTTACGCTATTCTTATTGTCTTTGAAGGCAATGGATTTGCATTTCATTCAAATTCATGCACCTTAT

mRNA sequence

ATGTCAAACAATTGGGCCGAGAAGCTATACAATAAGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGATCGAGGCAATGGATTTGCATTTCATTCAAATTCATGCACCTTAT

Coding sequence (CDS)

ATGTCAAACAATTGGGCCGAGAAGCTATACAATAAGCAAAACATACCACTCAACGAAAATGAGAAACTACTCAGGTCCACTCCTGCACGAACAATCACGAGGAAGGACTTGAACATTTATACCTTATTTTTCCGACACAAACATCAAACTCATGGAGTCTCAATAAAGATAGATCTATTCGATTGA

Protein sequence

MSNNWAEKLYNKQNIPLNENEKLLRSTPARTITRKDLNIYTLFFRHKHQTHGVSIKIDLFD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G005470.1Lsi01G005470.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G005470Cucumber (Chinese Long) v3cuclsiB181
Lsi01G005470Cucumber (Chinese Long) v3cuclsiB462
Lsi01G005470Watermelon (97103) v2lsiwmbB115
Lsi01G005470Watermelon (97103) v2lsiwmbB118
Lsi01G005470Wax gourdlsiwgoB149
Lsi01G005470Wax gourdlsiwgoB168
Lsi01G005470Bottle gourd (USVL1VR-Ls)lsilsiB078
Lsi01G005470Bottle gourd (USVL1VR-Ls)lsilsiB081
Lsi01G005470Cucumber (Gy14) v1cgylsiB022
Lsi01G005470Cucumber (Gy14) v1cgylsiB527
Lsi01G005470Cucurbita maxima (Rimu)cmalsiB306
Lsi01G005470Cucurbita maxima (Rimu)cmalsiB407
Lsi01G005470Cucurbita maxima (Rimu)cmalsiB517
Lsi01G005470Cucurbita maxima (Rimu)cmalsiB597
Lsi01G005470Cucurbita maxima (Rimu)cmalsiB786
Lsi01G005470Cucurbita moschata (Rifu)cmolsiB293
Lsi01G005470Cucurbita moschata (Rifu)cmolsiB393
Lsi01G005470Cucurbita moschata (Rifu)cmolsiB502
Lsi01G005470Cucurbita moschata (Rifu)cmolsiB582
Lsi01G005470Cucurbita moschata (Rifu)cmolsiB774
Lsi01G005470Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G005470Cucurbita pepo (Zucchini)cpelsiB165
Lsi01G005470Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G005470Cucumber (Chinese Long) v2culsiB165
Lsi01G005470Wild cucumber (PI 183967)cpilsiB164
Lsi01G005470Wild cucumber (PI 183967)cpilsiB439
Lsi01G005470Cucumber (Chinese Long) v2culsiB434
Lsi01G005470Melon (DHL92) v3.5.1lsimeB146
Lsi01G005470Melon (DHL92) v3.5.1lsimeB156
Lsi01G005470Watermelon (Charleston Gray)lsiwcgB120
Lsi01G005470Watermelon (Charleston Gray)lsiwcgB127
Lsi01G005470Watermelon (97103) v1lsiwmB129
Lsi01G005470Watermelon (97103) v1lsiwmB144
Lsi01G005470Cucumber (Gy14) v2cgyblsiB150
Lsi01G005470Cucumber (Gy14) v2cgyblsiB398
Lsi01G005470Melon (DHL92) v3.6.1lsimedB152
Lsi01G005470Melon (DHL92) v3.6.1lsimedB163
Lsi01G005470Silver-seed gourdcarlsiB364
Lsi01G005470Silver-seed gourdcarlsiB585