BLAST of Lsi01G005300.1 vs. Swiss-Prot
Match:
HNRPF_BOVIN (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF PE=2 SV=3)
HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1
Query: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 111
VV+LRGLP++C+ D+ F + I D + + + GR GEAFV V+ AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 112 QRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 171
++DR++MG RY+EVF+ R + D S P +D
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEM--------------DWVLKHSGPNSADTANDG------ 131
Query: 172 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 231
++LRGLPF TK II+FF ++ + I + P+GK TGEA+V+FAS E A++A+
Sbjct: 132 -FVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191
Query: 232 KDKMTIGSRYVELFPSTPNEAR 249
K K IG RY+E+F S+ E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192
BLAST of Lsi01G005300.1 vs. Swiss-Prot
Match:
HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3)
HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 73/202 (36.14%), Postives = 108/202 (53.47%), Query Frame = 1
Query: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 111
VV+LRGLP++C+ D+ F + I D + + + GR GEAFV V+ AL
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 112 QRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 171
++DR++MG RY+EVF+ R + D S P +D
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEM--------------DWVLKHSGPNSADSANDG------ 131
Query: 172 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 231
++LRGLPF TK I++FF ++ + I + P+GK TGEA+V+FAS E A++A+
Sbjct: 132 -FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191
Query: 232 KDKMTIGSRYVELFPSTPNEAR 249
K K IG RY+E+F S+ E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192
BLAST of Lsi01G005300.1 vs. Swiss-Prot
Match:
HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3)
HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 73/202 (36.14%), Postives = 108/202 (53.47%), Query Frame = 1
Query: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFAL 111
VV+LRGLP++C+ D+ F + I D + + + GR GEAFV V+ AL
Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71
Query: 112 QRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 171
++DR++MG RY+EVF+ R + D S P +D
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEM--------------DWVLKHSGPNSADSANDG------ 131
Query: 172 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 231
++LRGLPF TK I++FF ++ + I + P+GK TGEA+V+FAS E A++A+
Sbjct: 132 -FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191
Query: 232 KDKMTIGSRYVELFPSTPNEAR 249
K K IG RY+E+F S+ E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192
BLAST of Lsi01G005300.1 vs. Swiss-Prot
Match:
HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3)
HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 1
Query: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVDV-----LLVNKNGRFMGEAFVVFAGSVQVEFAL 111
VV+LRGLP++C+ D+ F + I D + + GR GEAFV V+ AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 112 QRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 171
++DR++MG RY+EVF+ R + D S P +D
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEM--------------DWVLKHSGPNSADSANDG------ 131
Query: 172 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 231
++LRGLPF TK I++FF ++ + I + P+GK TGEA+V+FAS E A++A+
Sbjct: 132 -FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191
Query: 232 KDKMTIGSRYVELFPSTPNEAR 249
K K IG RY+E+F S+ E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192
BLAST of Lsi01G005300.1 vs. Swiss-Prot
Match:
HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3)
HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 1
Query: 52 VVRLRGLPFNCTDIDIFKFFAGLDIVDV-----LLVNKNGRFMGEAFVVFAGSVQVEFAL 111
VV+LRGLP++C+ D+ F + I D + + GR GEAFV V+ AL
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71
Query: 112 QRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYT 171
++DR++MG RY+EVF+ R + D S P +D
Sbjct: 72 KKDRESMGHRYIEVFKSHRTEM--------------DWVLKHSGPNSADSANDG------ 131
Query: 172 EILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMS 231
++LRGLPF TK I++FF ++ + I + P+GK TGEA+V+FAS E A++A+
Sbjct: 132 -FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191
Query: 232 KDKMTIGSRYVELFPSTPNEAR 249
K K IG RY+E+F S+ E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192
BLAST of Lsi01G005300.1 vs. TrEMBL
Match:
A0A0A0KJN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509630 PE=4 SV=1)
HSP 1 Score: 516.2 bits (1328), Expect = 2.4e-143
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 60
MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF
Sbjct: 8 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 67
Query: 61 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 120
NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV
Sbjct: 68 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 127
Query: 121 FRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 180
FRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK
Sbjct: 128 FRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 187
Query: 181 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 240
SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF
Sbjct: 188 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 247
Query: 241 PSTPNEARRAESRSRQ 257
PSTPNEARRAESRSRQ
Sbjct: 248 PSTPNEARRAESRSRQ 263
BLAST of Lsi01G005300.1 vs. TrEMBL
Match:
A0A067EU91_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024584mg PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 9.3e-124
Identity = 223/258 (86.43%), Postives = 239/258 (92.64%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS-FPPTHAFPVVRLRGLP 60
+LGSGGVSDGYEVGSKRQRMMEPNPYFAVSSS +GFQPYGYG FPP +FPVVRLRGLP
Sbjct: 8 ILGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSASGFQPYGYGGGFPPPPSFPVVRLRGLP 67
Query: 61 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 120
FNCTDIDI KFFAGLDIVDVLLVNKNGRF GEAFVVFAG +QVEFALQRDRQNMGRRYVE
Sbjct: 68 FNCTDIDICKFFAGLDIVDVLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVE 127
Query: 121 VFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFSV 180
VFRCKRQDYYNAVASEVNYEGIYDND+HGSPPP R KR++DKDQME+TEILK+RGLPFSV
Sbjct: 128 VFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSV 187
Query: 181 TKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVE 240
KS I++FF ++ + ED+IHIA RPDGKATGEAYVEF S EEAKRAM KDKMTIGSRYVE
Sbjct: 188 KKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVE 247
Query: 241 LFPSTPNEARRAESRSRQ 257
LFPSTP+EARRAESRSRQ
Sbjct: 248 LFPSTPDEARRAESRSRQ 265
BLAST of Lsi01G005300.1 vs. TrEMBL
Match:
V4TGP3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016281mg PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 9.3e-124
Identity = 223/258 (86.43%), Postives = 239/258 (92.64%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS-FPPTHAFPVVRLRGLP 60
+LGSGGVSDGYEVGSKRQRMMEPNPYFAVSSS +GFQPYGYG FPP +FPVVRLRGLP
Sbjct: 8 ILGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSASGFQPYGYGGGFPPPPSFPVVRLRGLP 67
Query: 61 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 120
FNCTDIDI KFFAGLDIVDVLLVNKNGRF GEAFVVFAG +QVEFALQRDRQNMGRRYVE
Sbjct: 68 FNCTDIDICKFFAGLDIVDVLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVE 127
Query: 121 VFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFSV 180
VFRCKRQDYYNAVASEVNYEGIYDND+HGSPPP R KR++DKDQME+TEILK+RGLPFSV
Sbjct: 128 VFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSV 187
Query: 181 TKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVE 240
KS I++FF ++ + ED+IHIA RPDGKATGEAYVEF S EEAKRAM KDKMTIGSRYVE
Sbjct: 188 KKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVE 247
Query: 241 LFPSTPNEARRAESRSRQ 257
LFPSTP+EARRAESRSRQ
Sbjct: 248 LFPSTPDEARRAESRSRQ 265
BLAST of Lsi01G005300.1 vs. TrEMBL
Match:
A5BUE1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016468 PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 9.3e-124
Identity = 225/259 (86.87%), Postives = 243/259 (93.82%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS--FPPTHAFPVVRLRGL 60
MLGSGGVSDGYE+GSKRQRMME NPYFAVSSS +GFQPYGYGS PPT FPVVRLRGL
Sbjct: 1 MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPT--FPVVRLRGL 60
Query: 61 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 120
PFNCTDIDIFKFFAGLDIVDVLLVNK+GRF GEA+VVFAGS+Q +FALQRDRQNMGRRYV
Sbjct: 61 PFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 120
Query: 121 EVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFS 180
EVFRCK+QDYY+AVASEVNYEGIYDND+HGSPPP R KRFSDKDQME+TEILKLRGLPFS
Sbjct: 121 EVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFS 180
Query: 181 VTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYV 240
V KS I+EFFG+F+L +D++HIA RPDGKATGEAYVEFASAEEAK+AM KDKMTIGSRYV
Sbjct: 181 VKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYV 240
Query: 241 ELFPSTPNEARRAESRSRQ 257
ELFPSTP+EARRAESRSRQ
Sbjct: 241 ELFPSTPDEARRAESRSRQ 257
BLAST of Lsi01G005300.1 vs. TrEMBL
Match:
F6I0K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00080 PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 9.3e-124
Identity = 225/259 (86.87%), Postives = 243/259 (93.82%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS--FPPTHAFPVVRLRGL 60
MLGSGGVSDGYE+GSKRQRMME NPYFAVSSS +GFQPYGYGS PPT FPVVRLRGL
Sbjct: 8 MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPT--FPVVRLRGL 67
Query: 61 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 120
PFNCTDIDIFKFFAGLDIVDVLLVNK+GRF GEA+VVFAGS+Q +FALQRDRQNMGRRYV
Sbjct: 68 PFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 127
Query: 121 EVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFS 180
EVFRCK+QDYY+AVASEVNYEGIYDND+HGSPPP R KRFSDKDQME+TEILKLRGLPFS
Sbjct: 128 EVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFS 187
Query: 181 VTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYV 240
V KS I+EFFG+F+L +D++HIA RPDGKATGEAYVEFASAEEAK+AM KDKMTIGSRYV
Sbjct: 188 VKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYV 247
Query: 241 ELFPSTPNEARRAESRSRQ 257
ELFPSTP+EARRAESRSRQ
Sbjct: 248 ELFPSTPDEARRAESRSRQ 264
BLAST of Lsi01G005300.1 vs. TAIR10
Match:
AT5G66010.1 (AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 343.2 bits (879), Expect = 1.4e-94
Identity = 175/263 (66.54%), Postives = 206/263 (78.33%), Query Frame = 1
Query: 1 MLGSGGV---SDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRG 60
M GS G S GYEVGSKRQRMM+ NPY AV + F P+GY FPVVRLRG
Sbjct: 1 MYGSRGAMFGSGGYEVGSKRQRMMQSNPYLAVGTGPTSFPPFGYAG-----GFPVVRLRG 60
Query: 61 LPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRY 120
LPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG +QVE ALQRDR NMGRRY
Sbjct: 61 LPFNCADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRY 120
Query: 121 VEVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRG 180
VEVFRC +QDYYNAVA+E EG Y+ + SPPP R KRFS+K+++EYTE+LK+RG
Sbjct: 121 VEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAKRFSEKEKLEYTEVLKMRG 180
Query: 181 LPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240
LP+SV K IIEFF + + + R+ + RPDGKATGEA+VEF + EEA+RAM+KDKM+IG
Sbjct: 181 LPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIG 240
Query: 241 SRYVELFPSTPNEARRAESRSRQ 257
SRYVELFP+T EARRAE+RSRQ
Sbjct: 241 SRYVELFPTTREEARRAEARSRQ 255
BLAST of Lsi01G005300.1 vs. TAIR10
Match:
AT3G20890.1 (AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62
Identity = 130/288 (45.14%), Postives = 182/288 (63.19%), Query Frame = 1
Query: 3 GSGGVSDGYEVGSKRQRMME---PNPYFAVSSSTAG-FQPYGYGSFPPTHAFPVVRLRGL 62
G G DG E+G KRQRM++ P P++ S+ + PYG+ + PP FP VRLRGL
Sbjct: 5 GYGDGPDGREMGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGL 64
Query: 63 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 122
PF+C ++D+ +FF GLD+VDVL V++N + GEAF V +QV+FALQ++RQNMGRRYV
Sbjct: 65 PFDCAELDVVEFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 124
Query: 123 EVFRCKRQDYYNAVASEVNYEGIY--------------------------DNDYHGSPPP 182
EVFR +Q+YY A+A+EV ++ GS P
Sbjct: 125 EVFRSTKQEYYKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSPR 184
Query: 183 R---QKRFSD--KDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKA 242
R + R SD K+ +E+T IL+LRGLPFS K +I++FF +F+L+ED +H+ +G+
Sbjct: 185 RHVQRARSSDDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRP 244
Query: 243 TGEAYVEFASAEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR 256
TGEA+VEF +AE+++ AM KD+ T+GSRY+ELFPS+ E A SR R
Sbjct: 245 TGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 292
BLAST of Lsi01G005300.1 vs. TAIR10
Match:
AT4G36960.1 (AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07
Identity = 28/85 (32.94%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 169 LKLRGLPFSVTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKD 228
L + G+P+ + + ++ +F ED I + R G++ G YV FASAE+AK A+ K
Sbjct: 5 LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNAL-KG 64
Query: 229 KMTIGSRYVELFPSTPNEARRAESR 254
+ +G+R +E+ +TP E R ++
Sbjct: 65 EHFLGNRILEVKVATPKEEMRQPAK 88
BLAST of Lsi01G005300.1 vs. TAIR10
Match:
AT3G10845.1 (AT3G10845.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06
Identity = 39/157 (24.84%), Postives = 69/157 (43.95%), Query Frame = 1
Query: 80 LLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNM---GRRYVEVFRC------KRQDYYN 139
L+VN G+ +G+ FV FA + + E AL++ + G +++ K +DY
Sbjct: 214 LIVNHTGKHVGKGFVEFASAKEAENALEKKKGEYLQDGEIFLKAANIAPFPPPKYEDYLG 273
Query: 140 AVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEF 199
E EG+ + Y ++ F + LP + ++ FF +F
Sbjct: 274 QERDEAAVEGLAETPYFVEEARKKTLF-------------VTNLPPRTSIQRMLYFFQDF 333
Query: 200 DLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSK 228
++ R+ + GK G Y EFASA EA++A+ +
Sbjct: 334 EVV--RVRLIVDQSGKHMGCGYFEFASANEAEKALEQ 355
BLAST of Lsi01G005300.1 vs. NCBI nr
Match:
gi|449434084|ref|XP_004134826.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus])
HSP 1 Score: 516.2 bits (1328), Expect = 3.4e-143
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 60
MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF
Sbjct: 8 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 67
Query: 61 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 120
NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV
Sbjct: 68 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 127
Query: 121 FRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 180
FRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK
Sbjct: 128 FRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 187
Query: 181 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 240
SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF
Sbjct: 188 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 247
Query: 241 PSTPNEARRAESRSRQ 257
PSTPNEARRAESRSRQ
Sbjct: 248 PSTPNEARRAESRSRQ 263
BLAST of Lsi01G005300.1 vs. NCBI nr
Match:
gi|659080654|ref|XP_008440908.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo])
HSP 1 Score: 515.8 bits (1327), Expect = 4.4e-143
Identity = 254/256 (99.22%), Postives = 256/256 (100.00%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 60
MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF
Sbjct: 8 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 67
Query: 61 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 120
NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV
Sbjct: 68 NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 127
Query: 121 FRCKRQDYYNAVASEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 180
FRCKRQDYYNA+A+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK
Sbjct: 128 FRCKRQDYYNAIAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 187
Query: 181 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 240
SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF
Sbjct: 188 SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 247
Query: 241 PSTPNEARRAESRSRQ 257
PSTPNEARRAESRSRQ
Sbjct: 248 PSTPNEARRAESRSRQ 263
BLAST of Lsi01G005300.1 vs. NCBI nr
Match:
gi|1009169220|ref|XP_015903074.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Ziziphus jujuba])
HSP 1 Score: 465.3 bits (1196), Expect = 6.8e-128
Identity = 232/258 (89.92%), Postives = 246/258 (95.35%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS-FPPTHAFPVVRLRGLP 60
M GSGGVSDGYEVGSKRQRMME NPYFAVSSST+GFQPYGYG+ F +FPVVRLRGLP
Sbjct: 8 MFGSGGVSDGYEVGSKRQRMMESNPYFAVSSSTSGFQPYGYGAGFHQPPSFPVVRLRGLP 67
Query: 61 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 120
FNCTDIDIFKFFAGLDIVDVLLVNKNGRF GEAFVVFAGS+QVEFALQRDRQNMGRRYVE
Sbjct: 68 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFSGEAFVVFAGSMQVEFALQRDRQNMGRRYVE 127
Query: 121 VFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFSV 180
VFRCKR+DYYNAVA+EVNYEGIYDNDYHGSPPP R KRFSDK+QMEYTEILK+RGLPFS
Sbjct: 128 VFRCKREDYYNAVAAEVNYEGIYDNDYHGSPPPSRSKRFSDKEQMEYTEILKMRGLPFSA 187
Query: 181 TKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVE 240
TKS+I+EFFGEF+LAEDRIHIA RPDGKATGEAYVEF+SAEEAK+AMSKDKMTIGSRYVE
Sbjct: 188 TKSDIVEFFGEFNLAEDRIHIACRPDGKATGEAYVEFSSAEEAKKAMSKDKMTIGSRYVE 247
Query: 241 LFPSTPNEARRAESRSRQ 257
LFPSTP+EARRAESRSRQ
Sbjct: 248 LFPSTPDEARRAESRSRQ 265
BLAST of Lsi01G005300.1 vs. NCBI nr
Match:
gi|147834707|emb|CAN70556.1| (hypothetical protein VITISV_016468 [Vitis vinifera])
HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-123
Identity = 225/259 (86.87%), Postives = 243/259 (93.82%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS--FPPTHAFPVVRLRGL 60
MLGSGGVSDGYE+GSKRQRMME NPYFAVSSS +GFQPYGYGS PPT FPVVRLRGL
Sbjct: 1 MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPT--FPVVRLRGL 60
Query: 61 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYV 120
PFNCTDIDIFKFFAGLDIVDVLLVNK+GRF GEA+VVFAGS+Q +FALQRDRQNMGRRYV
Sbjct: 61 PFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYV 120
Query: 121 EVFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFS 180
EVFRCK+QDYY+AVASEVNYEGIYDND+HGSPPP R KRFSDKDQME+TEILKLRGLPFS
Sbjct: 121 EVFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFS 180
Query: 181 VTKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYV 240
V KS I+EFFG+F+L +D++HIA RPDGKATGEAYVEFASAEEAK+AM KDKMTIGSRYV
Sbjct: 181 VKKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYV 240
Query: 241 ELFPSTPNEARRAESRSRQ 257
ELFPSTP+EARRAESRSRQ
Sbjct: 241 ELFPSTPDEARRAESRSRQ 257
BLAST of Lsi01G005300.1 vs. NCBI nr
Match:
gi|567907979|ref|XP_006446303.1| (hypothetical protein CICLE_v10016281mg [Citrus clementina])
HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-123
Identity = 223/258 (86.43%), Postives = 239/258 (92.64%), Query Frame = 1
Query: 1 MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGS-FPPTHAFPVVRLRGLP 60
+LGSGGVSDGYEVGSKRQRMMEPNPYFAVSSS +GFQPYGYG FPP +FPVVRLRGLP
Sbjct: 8 ILGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSASGFQPYGYGGGFPPPPSFPVVRLRGLP 67
Query: 61 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 120
FNCTDIDI KFFAGLDIVDVLLVNKNGRF GEAFVVFAG +QVEFALQRDRQNMGRRYVE
Sbjct: 68 FNCTDIDICKFFAGLDIVDVLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVE 127
Query: 121 VFRCKRQDYYNAVASEVNYEGIYDNDYHGSPPP-RQKRFSDKDQMEYTEILKLRGLPFSV 180
VFRCKRQDYYNAVASEVNYEGIYDND+HGSPPP R KR++DKDQME+TEILK+RGLPFSV
Sbjct: 128 VFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSV 187
Query: 181 TKSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVE 240
KS I++FF ++ + ED+IHIA RPDGKATGEAYVEF S EEAKRAM KDKMTIGSRYVE
Sbjct: 188 KKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVE 247
Query: 241 LFPSTPNEARRAESRSRQ 257
LFPSTP+EARRAESRSRQ
Sbjct: 248 LFPSTPDEARRAESRSRQ 265
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
HNRPF_BOVIN | 4.4e-26 | 36.63 | Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF PE=2 SV=3 | [more] |
HNRPF_RAT | 5.8e-26 | 36.14 | Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV... | [more] |
HNRPF_MOUSE | 5.8e-26 | 36.14 | Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3 | [more] |
HNRPF_MACFA | 5.8e-26 | 36.14 | Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 ... | [more] |
HNRPF_HUMAN | 5.8e-26 | 36.14 | Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KJN7_CUCSA | 2.4e-143 | 99.61 | Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509630 PE=4 SV=1 | [more] |
A0A067EU91_CITSI | 9.3e-124 | 86.43 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024584mg PE=4 SV=1 | [more] |
V4TGP3_9ROSI | 9.3e-124 | 86.43 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016281mg PE=4 SV=1 | [more] |
A5BUE1_VITVI | 9.3e-124 | 86.87 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016468 PE=4 SV=1 | [more] |
F6I0K0_VITVI | 9.3e-124 | 86.87 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00080 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G66010.1 | 1.4e-94 | 66.54 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G20890.1 | 1.4e-62 | 45.14 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G36960.1 | 8.3e-07 | 32.94 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G10845.1 | 4.1e-06 | 24.84 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |