Cucsa.364970.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACTGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCTAAACTCCACCGTTTTCCTCGATCAAACAATTTCTGGGACTCCAAAGTCGCCTCTCGCGTCGGCGAAAAGCTCGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAGCTATCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTTGATTCTGTTCAGCGCTCCGGCGTCGCCGTTGATGGGGCTGAGAAGCTTGGAACAGGTTCGATCTAG ATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACTGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCTAAACTCCACCGTTTTCCTCGATCAAACAATTTCTGGGACTCCAAAGTCGCCTCTCGCGTCGGCGAAAAGCTCGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAGCTATCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTTGATTCTGTTCAGCGCTCCGGCGTCGCCGTTGATGGGGCTGAGAAGCTTGGAACAGGTTCGATCTAG ATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACTGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCTAAACTCCACCGTTTTCCTCGATCAAACAATTTCTGGGACTCCAAAGTCGCCTCTCGCGTCGGCGAAAAGCTCGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAGCTATCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTTGATTCTGTTCAGCGCTCCGGCGTCGCCGTTGATGGGGCTGAGAAGCTTGGAACAGGTTCGATCTAG MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGEKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQRSGVAVDGAEKLGTGSI*
BLAST of Cucsa.364970.1 vs. TrEMBL
Match: A0A0A0KE39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042360 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.0e-62 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. TrEMBL
Match: B9T5C2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0655970 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.8e-44 Identity = 93/122 (76.23%), Postives = 108/122 (88.52%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. TrEMBL
Match: A0A0J8CPM9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057010 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 4.7e-44 Identity = 88/118 (74.58%), Postives = 110/118 (93.22%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. TrEMBL
Match: F6HYR6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00290 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.1e-43 Identity = 87/121 (71.90%), Postives = 108/121 (89.26%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. TrEMBL
Match: A0A103XYM3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_022475 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 9.8e-42 Identity = 84/118 (71.19%), Postives = 103/118 (87.29%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. TAIR10
Match: AT2G43310.1 (AT2G43310.1 Ribosomal L18p/L5e family protein) HSP 1 Score: 168.3 bits (425), Expect = 3.0e-42 Identity = 84/123 (68.29%), Postives = 104/123 (84.55%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. NCBI nr
Match: gi|449446251|ref|XP_004140885.1| (PREDICTED: uncharacterized protein LOC101204363 [Cucumis sativus]) HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. NCBI nr
Match: gi|659089892|ref|XP_008445736.1| (PREDICTED: uncharacterized protein LOC103488672 [Cucumis melo]) HSP 1 Score: 240.0 bits (611), Expect = 2.3e-60 Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. NCBI nr
Match: gi|255585499|ref|XP_002533441.1| (PREDICTED: uncharacterized protein LOC8280415 [Ricinus communis]) HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44 Identity = 93/122 (76.23%), Postives = 108/122 (88.52%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. NCBI nr
Match: gi|731322931|ref|XP_010672162.1| (PREDICTED: uncharacterized protein LOC104888786 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 185.3 bits (469), Expect = 6.8e-44 Identity = 88/118 (74.58%), Postives = 110/118 (93.22%), Query Frame = 1
BLAST of Cucsa.364970.1 vs. NCBI nr
Match: gi|225433866|ref|XP_002265052.1| (PREDICTED: uncharacterized protein LOC100264652 [Vitis vinifera]) HSP 1 Score: 182.6 bits (462), Expect = 4.4e-43 Identity = 87/121 (71.90%), Postives = 108/121 (89.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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