Cucsa.357230.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCCAGAACATAGGCACTGGTTAAGGAACTGCCCAAGTACCTTGCAGAGAAAAAGGCAGAGAAGGAAACGCAAGGTCAATATGATTTACTAGTTGTTGAAGTTTAGTAGAATATAAAAATTCAACATGGATACTAGATTCATGAGCCACTAATCATATTTGTCTCTCATTTCAAGAAAaTAGTTATTGGAAAAaGCTTTTAGAAAACGAGATCAGTCTCAAGGTTGGAACATGAGAGATGATCTCAACTGAAGCAGTGAGAGATTTAAAGTTGTATTTTGAAGATATATATGTCATACTTAAGAATGTCTTGTTATGTACCTCAAATGAGAAAAAATTTAATATCTATCTCTTGTATTTTGGAACAAATGTATAGAATATCTTTTGAAATTAATGAAACATTCATTCTCTAGATTCCACTAGGCAACACGAATAGTTTGTACAATGAGaAAAAAAAGCAGAAGGAAAAAAaGAAACCATATTAACCCTAATTGACCAATAGTTATTAACCGAGAAACCCTACACTCTTTAAAATATATTAGTTTTTCTCCACATCCACTCGGAGCTCCAGCCGGCAGCCACACCAACCTTCTGCCTTCGTCCTCCATCCAAATTCTCAGCCCTAAATCTACTCAACATGGTATGTTATTTCTTCAAAACCCTTCAAAATTTTCTTCTTCTTCCCTCTATTACTCTCTTTTCCCTGTCCAATCGACTAAGCCTAGTGTAGAACCCTATTCCAAGTTACCGCAATTGTTTTGGGAAATTACTTATGTTTTTTGGAAAATTAGCCACGTTATTATTTGAGTTCATCTTTCTATACACTTTTCGTCACTGGAAATCAAAGCAGAATAGATGGACTAAGTTGCGGAATCAGTTTGATTGAACTGCTGAACGGCAGTGATTTTTTAAATAAATTTTATTGGATTTGAAATATGGCTAAGTTGATAGTTCTGTGATTTTATAAATTATTATGACGGTTATCCGTTTCAATTTTCTATATGTAATTGTGCGGTCCAAGGGGAAAATGTACAAGTAATGATTTTATTGAGTGAGGAAAGGATGGGAAGTCTATATGTTGTGTGATTTATGAATTCAGTAATATAAACTTTATCCTACTTGGTATCCATATGGCAGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAATTTGTTATGTGATGACTGTTTGTTTTGAAGTTTAGGCTCAGTTTGATAACTGCTTGATTGAAATGTTAAACTTTATAAACTGCACTTCTTTCTACCTAAAATTATTTGTTTAGTTAGCTTCTTATTCTAACATGTACTCAAAGTTCAAGGGAAAATGTGAAGACTAAACAATGTAGGGCTCGTTTCACACCTGTTTCACACCTATTTCGTTTTtGGTTTTTGAAAATTAAGCTTATAAATATTAACTTCCGCCTGTCTGAATTTCGCTATGAATTCAAATGTTTCTCCTCCATCTGCCCTTAAGAATAAAGGGTGTTTTCTGTGGATGGCTGAGCTTTGCACCGTGATTTGGGATGTTTGAGGGGAGAGGAATGATCGGGTGTGTCGCGGTAGAGAGAAGGACCAAAGTGAACCAGTGAGGTTTGGGGTTTGATTAGATTTTGTGTCCCTTTGGGCTTTAGTTTTGAAGACCTTTTTATTCCTTAGATATAAAATTTTAATTAGTTGGAATCTCTTTTTATAGGTGGGGTGCTATGATGGGTTTTCTTGCATGTCCTTGTATTCTTTCATTCTTTCTCAATAAAAGTTGTTTCTATATATAAAAAAAAaTTCCAATGTTTTCTTGTAAAAGATAAAAGTCATTGTAAAAAAATTAGGGAAAGTAAGCCCAATTTTCAAAACCAAAAACAAAAAaCCAAATTGTTATCAAAAGAGGCTGTAGTTTCTTTAAAACTTGGTTTCGGAATTTGGAATTTAGAATTCAGAATGTGTTTCTTCACTGGTTCTATGCCACGTCGTCGATAGCTCCACGGCAGTGACCAACAATGCTATGATTTAACCAAAAACAAGTTTTTTCACATCTTGATAGGAATCTGTTCATCTTTTTTCTATAGATTTACAGAGCTGTTTTGGGTGATTACATTTTTGTTTTCTTTTTAAATTAGGGTGTTTCTTCAAGAAGTGTGAAATCATAGTAAAGAAATGGCAAGTAAACTAGCTTAATTTTAAAAAACTGGAAATTAAAAACAAAACGGTCTTCAAAATATGTCTTAGTGTTTAGGAGTCGAGTGAGTATAGTACATCATTGATCCCTGTTACTGGTTAGTTTGAGGAATGCTTTTGTAAATCTTACATTCTTACCATTAATTGTATAATTTTAATTCTTATTTTGTTTATTACTCAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTGTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTGCTATCATTTCAGACAGATTAAGGGTATGGCTTGCTTAATCCCATTTAGCTTGTACCTTCACATGTTATAAATATGCATGTTTTTTtATTGTTAAATATTGACCAAGTTTCCTAATACTCGTTTGAAATTTATGTGCCCCACTACATTTTTCGATCATTTGTTTGTTTAAAAATAAGATTTTGATCCATTAAAAATAGAAGGAATAGAAATGGGGGATGTGCGATTATAGGTTGAGCTTTCTTTCTCGGTTTTTATGAACTCCAATGTATGATAATCACATAATTTGAAATACAAGTAAAAACCTGCATTTATTATACTGGCATATATCAAACTTCATTTGTTAGATATTCATTTCATGAAACATTTTATTGTATTTTTGTATTCTATGGTTCCCAAACATGTCGGATTTGTTCTGGGATGACTCAAATTATAGGTACATAGTTTATGTAATGCCTATGAAGCACACATGCTTCATGTGTGGCAAAGAATTTGTATAAGATACCAATACTTTCAAATACTTCTCAGATGCGTATTTGATTCTCGCTTTGGCTGATGTATCTGACATGTATTTGACACATGATTCGACGTATCTATTTTTATTCTAACCTTTATTTAAAGAAAAAAGATAAGTAACTCATGCAATATTTCCCAACTCAAAACTATAACGACAAAAATAAATAAAAGACCAAATATTAGAATCATCTGATCGTCATCGTCATCGCATTTGAGTCTCCACTAGTAAAATATAATCCTCTTGAATATATTCAACAATTTAACAAATAAGTTCTTAGTTTATTTTCATACTTATCTCTAATCTTCTTCCTCTTTTCAGATCAATTTATCTCTTTTCTATTGCATTCTATTGATCATTGTACTTCCATAATCTGTCTATATCCTAGATTTTTTAAAGAAAAAaTACTGTATCTTCAAACGTATCTGTAGGGGTTTTTTAGAAATTTAGAAATTGACCTATCGACCTATCTTATCATATTTGTATCTCGTATCTATATCTGCTTCATAAATACAAATGTCCATTTGGATAATTTATCTCCTTTTTTtACTTACCTATTCCAAATGTGTCACTCACTTGAGATGCTGCGGTAGTCCAATTTTTATACTCATATCTATTCATATGGTTAACACAATTACCAAGTGTTCTCTTTCAATTTGATATCTCATTTCAGCCGGCGGTATGTTTTGTACATTATTATTTATTACTCCGTTTGAGGATAAACAAATTTTCTTCAGCCACTTAAACTCCCATTAAACCATAAGAGTAGTAAATCTTTTGTAACTGCTTCTTGTTATGAAGGATATGATATCTTCATCCAAAACAAAGTGGGTTTTCTTTGGTTAGAATGTCATTCCAACAAAACTTTAACTCGTTCTATTTGGATGGATTGTTATAGAGGGTAAATTTCTGAAATCCTGTTTGTTCGTTGACTGTTTTTATCAGATCAATGGATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCCAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACCAGAGCCACAAACACATGATAAAAAAGTTGCCATTTAAAAGAGGAACATCTTGGTTTTCTTTGCATCTCGTCAGGAACTAATATCTATGATTTTGAATATTTACATGTTTGCATTTAGAACTGGATGAATTATTTGCACTGCTTGATCGGATATATTTTTATATAATTTGAATTTTTGCTTTCATTTCTTTGAGTTTTTCTAGCAAATGAGCAAGCATGTACTATTGATTTTGGAATTAGAGATTTGTGCTCTCTACTTTGTCGATTGAAGAAAAAAaTACCGAAACATCTTATGTAAAGTGTAGTATGGCACTATTTAATGGCTCATTGGTTTATCAAATCCTTCTCCATTTTGACC atgtcgccagaacataggcactggttaaggaactgcccaaTTTTTCTCCACATCCACTCGGAGCTCCAGCCGGCAGCCACACCAACCTTCTGCCTTCGTCCTCCATCCAAATTCTCAGCCCTAAATCTACTCAACATGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTGTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTGCTATCATTTCAGACAGATTAAGGATCAATGGATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCCAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACCAGAGCCACAAACACATGATAAAAAAGTTGCCATTTAAAAGAGGAACATCTTGGTTTTCTTTGCATCTCGTCAGGAACTAATATCTATGATTTTGAATATTTACATGTTTGCATTTAGAACTGGATGAATTATTTGCACTGCTTGATCGGATATATTTTTATATAATTTGAATTTTTGCTTTCATTTCTTTGAGTTTTTCTAGCAAATGAGCAAGCATGTACTATTGATTTTGGAATTAGAGATTTGTGCTCTCTACTTTGTCGATTGAAGAAAAAAATACCGAAACATCTTATGTAAAGTGTAGTATGGCACTATTTAATGGCTCATTGGTTTATCAAATCCTTCTCCATTTTGACC ATGTCGCCAGAACATAGGCACTGGTTAAGGAACTGCCCAATTTTTCTCCACATCCACTCGGAGCTCCAGCCGGCAGCCACACCAACCTTCTGCCTTCGTCCTCCATCCAAATTCTCAGCCCTAAATCTACTCAACATGGCACCTAAGAAGGACAAGGCTCCTCCTCCATCCTCCAAGCCCGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAACCTATGACAAGCTTGTTTCAGAAGCTCCAAAGTTCAAGCTTATTACTCCTGCTATCATTTCAGACAGATTAAGGATCAATGGATCATTGGCACGTCGGGCGATCAAGGATTTAATGGCCAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAAATATACACCAGAGCCACAAACACATGA MSPEHRHWLRNCPIFLHIHSELQPAATPTFCLRPPSKFSALNLLNMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLVSEAPKFKLITPAIISDRLRINGSLARRAIKDLMARGSIRLISAHSSQQIYTRATNT*
BLAST of Cucsa.357230.1 vs. Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.1e-51 Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2) HSP 1 Score: 198.0 bits (502), Expect = 7.7e-50 Identity = 95/107 (88.79%), Postives = 105/107 (98.13%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.0e-49 Identity = 94/108 (87.04%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 5.0e-49 Identity = 93/108 (86.11%), Postives = 106/108 (98.15%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3) HSP 1 Score: 191.4 bits (485), Expect = 7.2e-48 Identity = 92/106 (86.79%), Postives = 101/106 (95.28%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TrEMBL
Match: A0A0A0KYW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571760 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.7e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TrEMBL
Match: A0A0A0KB40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045180 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.8e-50 Identity = 99/108 (91.67%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TrEMBL
Match: A9NKH7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50 Identity = 101/108 (93.52%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TrEMBL
Match: A0A067ESG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033931mg PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50 Identity = 101/108 (93.52%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TrEMBL
Match: V4RSB2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029626mg PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.4e-50 Identity = 101/108 (93.52%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TAIR10
Match: AT2G21580.1 (AT2G21580.1 Ribosomal protein S25 family protein) HSP 1 Score: 201.1 bits (510), Expect = 5.1e-52 Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TAIR10
Match: AT4G34555.1 (AT4G34555.1 Ribosomal protein S25 family protein) HSP 1 Score: 198.0 bits (502), Expect = 4.3e-51 Identity = 95/107 (88.79%), Postives = 105/107 (98.13%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TAIR10
Match: AT4G39200.1 (AT4G39200.1 Ribosomal protein S25 family protein) HSP 1 Score: 197.6 bits (501), Expect = 5.6e-51 Identity = 94/108 (87.04%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. TAIR10
Match: AT2G16360.1 (AT2G16360.1 Ribosomal protein S25 family protein) HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32 Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. NCBI nr
Match: gi|449453836|ref|XP_004144662.1| (PREDICTED: 40S ribosomal protein S25-2 [Cucumis sativus]) HSP 1 Score: 214.9 bits (546), Expect = 9.7e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. NCBI nr
Match: gi|659083221|ref|XP_008442240.1| (PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]) HSP 1 Score: 211.8 bits (538), Expect = 8.2e-52 Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. NCBI nr
Match: gi|470110659|ref|XP_004291591.1| (PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 208.4 bits (529), Expect = 9.1e-51 Identity = 102/108 (94.44%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. NCBI nr
Match: gi|659113490|ref|XP_008456601.1| (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50 Identity = 101/108 (93.52%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.357230.1 vs. NCBI nr
Match: gi|449446287|ref|XP_004140903.1| (PREDICTED: 40S ribosomal protein S25-2 [Cucumis sativus]) HSP 1 Score: 206.8 bits (525), Expect = 2.6e-50 Identity = 99/108 (91.67%), Postives = 107/108 (99.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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