Cucsa.299550.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTTCCAGGAACAAGGCGAATTCTCGGCTCTTTCGGGCTATGGATTGTCGCATTCACTTTGTTTTCAGCATCATCCAAAGCCCAGATGGCTGTCCCCTCCACCGGACAGCTCTGCATAAGTGATTGCTCCACCTGTCCCGTGATTTGCACGGCGCCGCCTCCTCCACTCTCTTACATTCCGCCTCCGCCGCCCAACTTTTACGGTGGGTTCAATATGGCACCACCGGCTACTCCGTCGTACTATTTATGGGGTCCGCCGCCTCCGGTTGCGAATTATTTTTTGGGCGCTCGGCCTTCCGGTGAGATGCCTCAAACGGTGGGGCCTCGGGATTATTCTTACCCTTATTATTATTTCTACAGTTCAAATTCGGGTTCGTTCACTTATATTTCGAAGTTCATTGTGCTGTTTGTTTGTTTGCTTCATTTTGTTTTGTAATGATGTTGACAAGAACCTGACGGATTGTTGTTGTTGAATGGTTTGTTCTTAAGCGGTTCATCAAATCCGTGATAAGATAACAGTGTCGAGTGTAGGTAACAGTGGAGTGTAGTTGTTGATGGGTTTGTTGAATTGTCTACTCGTATTGTAATGATAAGAAAAGATAAACTCTACTATCAAGTATGGATAGATCATTTGAGGAATATGCATGAGAGAAAGTTGTAT ATGCCGTTTCCAGGAACAAGGCGAATTCTCGGCTCTTTCGGGCTATGGATTGTCGCATTCACTTTGTTTTCAGCATCATCCAAAGCCCAGATGGCTGTCCCCTCCACCGGACAGCTCTGCATAAGTGATTGCTCCACCTGTCCCGTGATTTGCACGGCGCCGCCTCCTCCACTCTCTTACATTCCGCCTCCGCCGCCCAACTTTTACGGTGGGTTCAATATGGCACCACCGGCTACTCCGTCGTACTATTTATGGGGTCCGCCGCCTCCGGTTGCGAATTATTTTTTGGGCGCTCGGCCTTCCGGTGAGATGCCTCAAACGGTGGGGCCTCGGGATTATTCTTACCCTTATTATTATTTCTACAGTTCAAATTCGGGTTCGTTCACTTATATTTCGAAGTTCATTGTGCTGTTTGTTTGTTTGCTTCATTTTGTTTTGTAATGATGTTGACAAGAACCTGACGGATTGTTGTTGTTGAATGGTTTGTTCTTAAGCGGTTCATCAAATCCGTGATAAGATAACAGTGTCGAGTGTAGGTAACAGTGGAGTGTAGTTGTTGATGGGTTTGTTGAATTGTCTACTCGTATTGTAATGATAAGAAAAGATAAACTCTACTATCAAGTATGGATAGATCATTTGAGGAATATGCATGAGAGAAAGTTGTAT ATGCCGTTTCCAGGAACAAGGCGAATTCTCGGCTCTTTCGGGCTATGGATTGTCGCATTCACTTTGTTTTCAGCATCATCCAAAGCCCAGATGGCTGTCCCCTCCACCGGACAGCTCTGCATAAGTGATTGCTCCACCTGTCCCGTGATTTGCACGGCGCCGCCTCCTCCACTCTCTTACATTCCGCCTCCGCCGCCCAACTTTTACGGTGGGTTCAATATGGCACCACCGGCTACTCCGTCGTACTATTTATGGGGTCCGCCGCCTCCGGTTGCGAATTATTTTTTGGGCGCTCGGCCTTCCGGTGAGATGCCTCAAACGGTGGGGCCTCGGGATTATTCTTACCCTTATTATTATTTCTACAGTTCAAATTCGGGTTCGTTCACTTATATTTCGAAGTTCATTGTGCTGTTTGTTTGTTTGCTTCATTTTGTTTTGTAA MPFPGTRRILGSFGLWIVAFTLFSASSKAQMAVPSTGQLCISDCSTCPVICTAPPPPLSYIPPPPPNFYGGFNMAPPATPSYYLWGPPPPVANYFLGARPSGEMPQTVGPRDYSYPYYYFYSSNSGSFTYISKFIVLFVCLLHFVL*
BLAST of Cucsa.299550.1 vs. TrEMBL
Match: A0A0A0L054_CUCSA (Microtubule associated protein (Ase1) OS=Cucumis sativus GN=Csa_4G646240 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 4.1e-84 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. TrEMBL
Match: A0A061GKL0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037325 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.0e-21 Identity = 58/155 (37.42%), Postives = 77/155 (49.68%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. TrEMBL
Match: W1P760_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00086p00122850 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18 Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. TrEMBL
Match: I1JTY5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G053000 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.8e-16 Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. TrEMBL
Match: F8WL72_CITUN (Putative uncharacterized protein ORF05 OS=Citrus unshiu GN=ORF05 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15 Identity = 51/149 (34.23%), Postives = 69/149 (46.31%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. TAIR10
Match: AT5G11990.1 (AT5G11990.1 proline-rich family protein) HSP 1 Score: 63.9 bits (154), Expect = 9.3e-11 Identity = 49/165 (29.70%), Postives = 70/165 (42.42%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. NCBI nr
Match: gi|700200192|gb|KGN55350.1| (Microtubule associated protein (Ase1) [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 5.9e-84 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. NCBI nr
Match: gi|731385032|ref|XP_010648362.1| (PREDICTED: extensin [Vitis vinifera]) HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21 Identity = 60/140 (42.86%), Postives = 72/140 (51.43%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. NCBI nr
Match: gi|590574196|ref|XP_007012334.1| (Uncharacterized protein TCM_037325 [Theobroma cacao]) HSP 1 Score: 109.0 bits (271), Expect = 7.1e-21 Identity = 58/155 (37.42%), Postives = 77/155 (49.68%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. NCBI nr
Match: gi|1009168446|ref|XP_015902662.1| (PREDICTED: extensin-1 [Ziziphus jujuba]) HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18 Identity = 64/171 (37.43%), Postives = 80/171 (46.78%), Query Frame = 1
BLAST of Cucsa.299550.1 vs. NCBI nr
Match: gi|586682932|ref|XP_006841135.1| (PREDICTED: formin-like protein 20 [Amborella trichopoda]) HSP 1 Score: 100.5 bits (249), Expect = 2.5e-18 Identity = 58/142 (40.85%), Postives = 74/142 (52.11%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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