Cucsa.218700.1 (mRNA) Cucumber (Gy14) v1

NameCucsa.218700.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger-like protein
Locationscaffold01658 : 694052 .. 694814 (-)
Sequence length679
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

mRNA sequence

GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

Coding sequence (CDS)

GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

Protein sequence

CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN*
BLAST of Cucsa.218700.1 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 1

Query: 93  KLLLFREFHMYR-----DIINIEHLVDEI-IKYWVTKVEEEEE---DQENSTSSRVLMMV 152
           K L  R+ H+ R      I     LVD I +  W  +   +E     Q+ +T    L + 
Sbjct: 147 KWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLT 206

Query: 153 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEE--IGKEEKGSEGVVLQMPCLHVFH 212
           P    A+E++++ +    + K   DDC  C+ICLEE  IG E +G       +PC H FH
Sbjct: 207 PAQTEAVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRG-------LPCAHNFH 266

Query: 213 GECINKWLNTSHYCPTCR 220
            ECI++WL  +  CP CR
Sbjct: 267 VECIDQWLRLNVKCPRCR 276

BLAST of Cucsa.218700.1 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

BLAST of Cucsa.218700.1 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 32/91 (35.16%), Postives = 44/91 (48.35%), Query Frame = 1

Query: 130 DQENSTSSRVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEG 189
           D EN  S   L    ++ S+ E ML         K G +D + C +CLE++   E     
Sbjct: 174 DPENGCS---LAKQASTSSSAEKMLDSANES---KKGTEDELTCSVCLEQVTVGE----- 233

Query: 190 VVLQMPCLHVFHGECINKWLNTSHYCPTCRF 221
           +V  +PCLH FH  CI+ WL     CP C+F
Sbjct: 234 IVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253

BLAST of Cucsa.218700.1 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P + + +ES+ + V      +L       C +CL E  +EE      V++MPC H+FH  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAEL------KCPVCLLEFEEEE-----TVIEMPCHHLFHSN 124

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+ ++ CP CR  +P
Sbjct: 125 CILPWLSKTNSCPLCRHELP 133

BLAST of Cucsa.218700.1 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1

Query: 171 IHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 224
           + C +CL E   EE      V++MPC H+FH  CI  WL+ ++ CP CR  +P
Sbjct: 86  LKCPVCLLEFEAEE-----TVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133

BLAST of Cucsa.218700.1 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-125
Identity = 225/253 (88.93%), Postives = 225/253 (88.93%), Query Frame = 1

Query: 1   CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 60
           CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN
Sbjct: 11  CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 70

Query: 61  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 120
           TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW
Sbjct: 71  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 130

Query: 121 VTKVEEEEEDQENSTSSR----------------------------VLMMVPTSDSAMES 180
           VTKVEEEEEDQENSTSSR                            VLMMVPTSDSAMES
Sbjct: 131 VTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDSAMES 190

Query: 181 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS
Sbjct: 191 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 250

BLAST of Cucsa.218700.1 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.7e-76
Identity = 155/253 (61.26%), Postives = 181/253 (71.54%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKCQHFQ+ E    ++
Sbjct: 14  GSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHS 73

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI SQH FATF+LPISI +HGDKTLK +LFREF MY DIINIE L +EIIK+WV
Sbjct: 74  TTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLANEIIKHWV 133

Query: 122 TKVEEEEEDQENST----------------SSRVL-------------MMVPTSDSAMES 181
            KVEEEE+ + NS                  S+++             +MVPTSDSA+ES
Sbjct: 134 RKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVES 193

Query: 182 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMK GDD+ I+CV+CLEEI KEEKGSE  VLQMPCLH+FH ECI KWL TS
Sbjct: 194 MLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTS 253

BLAST of Cucsa.218700.1 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.9e-73
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KCQH+    E  ++T
Sbjct: 14  GSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNST 73

Query: 62  --TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKY 121
             T L+ EHI S HP  T +LP+SI +HGDKTLK LLFREF +YR IINIE +VDEIIK+
Sbjct: 74  FATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKH 133

Query: 122 WVTKVEEE----------------------------EEDQENSTSSRVLMMVPTSDSAME 181
           WV KV+EE                            ++  E       +MMVPTS+SAME
Sbjct: 134 WVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAME 193

Query: 182 SMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNT 226
           SMLK+VENEEI+K GD+  I+CVICLEEI KE+KGSE VVLQMPCLH+FH ECI KWL  
Sbjct: 194 SMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKR 253

BLAST of Cucsa.218700.1 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.1e-73
Identity = 144/248 (58.06%), Postives = 178/248 (71.77%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQHF   EE ++  
Sbjct: 13  GYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFA 72

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI+SQ  F   +LPISI + GDKTLK LLF++F M+R I+N+E +VDEIIK+W+
Sbjct: 73  TTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEIIKHWI 132

Query: 122 TKVEEEEEDQENSTSS-----------------------RVLMMVPTSDSAMESMLKRVE 181
            KVEE++E+     +                        + +MMVPTSD+AMESMLKRVE
Sbjct: 133 RKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVE 192

Query: 182 -NEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPT 226
            NEE+MKLGDD  I CVICLE+IGKEEK S  VVLQMPCLH+FH ECI KWL TSH+CPT
Sbjct: 193 NNEELMKLGDDS-IDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPT 252

BLAST of Cucsa.218700.1 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.3e-72
Identity = 145/252 (57.54%), Postives = 172/252 (68.25%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQHFQ  EE+T+  
Sbjct: 12  GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFA 71

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TT + EHI++  PF   +LP+SI +HGDKTLK LLF++F M+R IINIE + D+IIK+WV
Sbjct: 72  TTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWV 131

Query: 122 TKVEEEEE---------------------------DQENSTSSR-VLMMVPTSDSAMESM 181
            KVE+++E                           DQ   T  +  + MVPTSDSAM+SM
Sbjct: 132 KKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKSM 191

Query: 182 LKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSH 226
           LKRVENEEIMK+GD   I CVICLE+I KEEKGSEGVVLQMPCLH+FH ECI KWL TSH
Sbjct: 192 LKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSH 251

BLAST of Cucsa.218700.1 vs. TAIR10
Match: AT3G47990.1 (AT3G47990.1 SUGAR-INSENSITIVE 3)

HSP 1 Score: 64.7 bits (156), Expect = 8.4e-11
Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 1

Query: 93  KLLLFREFHMYR-----DIINIEHLVDEI-IKYWVTKVEEEEE---DQENSTSSRVLMMV 152
           K L  R+ H+ R      I     LVD I +  W  +   +E     Q+ +T    L + 
Sbjct: 147 KWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLT 206

Query: 153 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEE--IGKEEKGSEGVVLQMPCLHVFH 212
           P    A+E++++ +    + K   DDC  C+ICLEE  IG E +G       +PC H FH
Sbjct: 207 PAQTEAVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRG-------LPCAHNFH 266

Query: 213 GECINKWLNTSHYCPTCR 220
            ECI++WL  +  CP CR
Sbjct: 267 VECIDQWLRLNVKCPRCR 276

BLAST of Cucsa.218700.1 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 1

Query: 173 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 226
           CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP++
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

BLAST of Cucsa.218700.1 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 61.2 bits (147), Expect = 9.3e-10
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

BLAST of Cucsa.218700.1 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 1

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P   S +E+M + V  E+  K G      C ICL+E  K +     V  +MPC H FH +
Sbjct: 84  PALKSEVENMPRVVIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSK 143

Query: 204 CINKWLNTSHYCPTCRFPMPI 225
           C+ +WL     CP CR+ MP+
Sbjct: 144 CVEEWLGRHATCPMCRYEMPV 155

BLAST of Cucsa.218700.1 vs. TAIR10
Match: AT1G74620.1 (AT1G74620.1 RING/U-box superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1

Query: 173 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 224
           C IC+E+  +       +V ++PC H FHG+CINKWL  +H CP CR  +P
Sbjct: 183 CAICMEDYIE----GSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

BLAST of Cucsa.218700.1 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 6.2e-125
Identity = 225/253 (88.93%), Postives = 225/253 (88.93%), Query Frame = 1

Query: 1   CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 60
           CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN
Sbjct: 11  CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 70

Query: 61  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 120
           TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW
Sbjct: 71  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 130

Query: 121 VTKVEEEEEDQENSTSSR----------------------------VLMMVPTSDSAMES 180
           VTKVEEEEEDQENSTSSR                            VLMMVPTSDSAMES
Sbjct: 131 VTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDSAMES 190

Query: 181 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS
Sbjct: 191 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 250

BLAST of Cucsa.218700.1 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 2.4e-76
Identity = 155/253 (61.26%), Postives = 181/253 (71.54%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKCQHFQ+ E    ++
Sbjct: 14  GSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHS 73

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI SQH FATF+LPISI +HGDKTLK +LFREF MY DIINIE L +EIIK+WV
Sbjct: 74  TTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLANEIIKHWV 133

Query: 122 TKVEEEEEDQENST----------------SSRVL-------------MMVPTSDSAMES 181
            KVEEEE+ + NS                  S+++             +MVPTSDSA+ES
Sbjct: 134 RKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVES 193

Query: 182 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMK GDD+ I+CV+CLEEI KEEKGSE  VLQMPCLH+FH ECI KWL TS
Sbjct: 194 MLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTS 253

BLAST of Cucsa.218700.1 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 5.6e-73
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KCQH+    E  ++T
Sbjct: 14  GSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNST 73

Query: 62  --TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKY 121
             T L+ EHI S HP  T +LP+SI +HGDKTLK LLFREF +YR IINIE +VDEIIK+
Sbjct: 74  FATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKH 133

Query: 122 WVTKVEEE----------------------------EEDQENSTSSRVLMMVPTSDSAME 181
           WV KV+EE                            ++  E       +MMVPTS+SAME
Sbjct: 134 WVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAME 193

Query: 182 SMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNT 226
           SMLK+VENEEI+K GD+  I+CVICLEEI KE+KGSE VVLQMPCLH+FH ECI KWL  
Sbjct: 194 SMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKR 253

BLAST of Cucsa.218700.1 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 7.2e-73
Identity = 144/248 (58.06%), Postives = 178/248 (71.77%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQHF   EE ++  
Sbjct: 13  GYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFA 72

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI+SQ  F   +LPISI + GDKTLK LLF++F M+R I+N+E +VDEIIK+W+
Sbjct: 73  TTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEIIKHWI 132

Query: 122 TKVEEEEEDQENSTSS-----------------------RVLMMVPTSDSAMESMLKRVE 181
            KVEE++E+     +                        + +MMVPTSD+AMESMLKRVE
Sbjct: 133 RKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVE 192

Query: 182 -NEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPT 226
            NEE+MKLGDD  I CVICLE+IGKEEK S  VVLQMPCLH+FH ECI KWL TSH+CPT
Sbjct: 193 NNEELMKLGDDS-IDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPT 252

BLAST of Cucsa.218700.1 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.0e-71
Identity = 145/252 (57.54%), Postives = 172/252 (68.25%), Query Frame = 1

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQHFQ  EE+T+  
Sbjct: 12  GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFA 71

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TT + EHI++  PF   +LP+SI +HGDKTLK LLF++F M+R IINIE + D+IIK+WV
Sbjct: 72  TTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWV 131

Query: 122 TKVEEEEE---------------------------DQENSTSSR-VLMMVPTSDSAMESM 181
            KVE+++E                           DQ   T  +  + MVPTSDSAM+SM
Sbjct: 132 KKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKSM 191

Query: 182 LKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSH 226
           LKRVENEEIMK+GD   I CVICLE+I KEEKGSEGVVLQMPCLH+FH ECI KWL TSH
Sbjct: 192 LKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSH 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SIS3_ARATH1.5e-0933.33E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2[more]
RDUF1_ARATH1.6e-0842.50E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
SDIR1_ARATH3.1e-0735.16E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
RN181_RAT2.0e-0633.75E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE4.5e-0641.51E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K2A5_CUCSA4.4e-12588.93Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
E5GCQ3_CUCME1.7e-7661.26Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K7L0_CUCSA3.9e-7358.27Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
E5GCQ4_CUCME5.1e-7358.06Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K2A1_CUCSA7.3e-7257.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G47990.18.4e-1133.33 SUGAR-INSENSITIVE 3[more]
AT1G26800.15.4e-1052.83 RING/U-box superfamily protein[more]
AT3G46620.19.3e-1042.50 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G14200.12.1e-0937.04 RING/U-box superfamily protein[more]
AT1G74620.14.6e-0945.10 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700188572|gb|KGN43805.1|6.2e-12588.93hypothetical protein Csa_7G068580 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|2.4e-7661.26PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|700188568|gb|KGN43801.1|5.6e-7358.27hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|659111005|ref|XP_008455526.1|7.2e-7358.06PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|700188567|gb|KGN43800.1|1.0e-7157.54hypothetical protein Csa_7G067550 [Cucumis sativus][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.218700Cucsa.218700gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.218700.1Cucsa.218700.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.218700.1.CDS.2Cucsa.218700.1.CDS.2CDS
Cucsa.218700.1.CDS.1Cucsa.218700.1.CDS.1CDS


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 172..219
score: 7.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 173..218
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 173..219
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 172..219
score: 4.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 163..222
score: 1.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 142..223
score: 5.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 172..223
score: 6.25