Cucsa.218700 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.218700
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger-like protein
Locationscaffold01658 : 694052 .. 694814 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTGTTTAAAAAGATTTATCGTCTCGAAATTACGTTAGAGTTGTTGATTTTTCAGATAGTTCGTGTAATGGATTATCAACCACAGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

mRNA sequence

GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

Coding sequence (CDS)

GTGTGGTTCCTACATGGGCATGAAACTAAGAATTTGTGACGATCCCGTTCAAAGGCGTCGACCACAAACCCAAATTCGAACTCGACGTAACTCCCCAACATTTTTCAAACAAATCGACCTGAATTTCGAAGTTCAACTCAAATGTCAGCACTTCCAAATCCGTGAAGAAGAAACTAGTAATACAACAACTCTAATTGATGAACACATAGTATCACAACATCCCTTTGCAACTTTCCGACTTCCTATCTCCATCTTGGAGCATGGTGACAAAACTTTGAAGCTATTACTTTTTCGGGAGTTTCATATGTATAGAGACATCATCAACATCGAGCATCTGGTTGACGAAATAATAAAATATTGGGTTACAAAAGTTGAAGAAGAAGAAGAAGATCAAGAGAATAGTACTTCTTCTAGGGTACTGATGATGGTTCCAACAAGCGATAGTGCTATGGAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAATAATGAAATTAGGTGATGATGACTGCATTCATTGTGTTATTTGTTTGGAGGAAATTGGTAAAGAGGAGAAGGGAAGTGAGGGAGTGGTGTTACAAATGCCATGTTTGCATGTGTTTCATGGAGAATGTATAAACAAGTGGTTGAATACAAGTCATTACTGTCCAACTTGTAGATTTCCAATGCCTATAAATTAA

Protein sequence

CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWVTKVEEEEEDQENSTSSRVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN*
Homology
[Close]
BLAST of Cucsa.218700 vs. Swiss-Prot
Match: SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 1 

Query: 93  KLLLFREFHMYR-----DIINIEHLVDEI-IKYWVTKVEEEEE---DQENSTSSRVLMMV 152
           K L  R+ H+ R      I     LVD I +  W  +   +E     Q+ +T    L + 
Sbjct: 147 KWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLT 206

Query: 153 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEE--IGKEEKGSEGVVLQMPCLHVFH 212
           P    A+E++++ +    + K   DDC  C+ICLEE  IG E +G       +PC H FH
Sbjct: 207 PAQTEAVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRG-------LPCAHNFH 266

Query: 213 GECINKWLNTSHYCPTCR 220
            ECI++WL  +  CP CR
Sbjct: 267 VECIDQWLRLNVKCPRCR 276

[Close]
BLAST of Cucsa.218700 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

[Close]
BLAST of Cucsa.218700 vs. Swiss-Prot
Match: SDIR1_ARATH (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 32/91 (35.16%), Postives = 44/91 (48.35%), Query Frame = 1 

Query: 130 DQENSTSSRVLMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEG 189
           D EN  S   L    ++ S+ E ML         K G +D + C +CLE++   E     
Sbjct: 174 DPENGCS---LAKQASTSSSAEKMLDSANES---KKGTEDELTCSVCLEQVTVGE----- 233

Query: 190 VVLQMPCLHVFHGECINKWLNTSHYCPTCRF 221
           +V  +PCLH FH  CI+ WL     CP C+F
Sbjct: 234 IVRTLPCLHQFHAGCIDPWLRQQGTCPVCKF 253

[Close]
BLAST of Cucsa.218700 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 1 

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P + + +ES+ + V      +L       C +CL E  +EE      V++MPC H+FH  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAEL------KCPVCLLEFEEEE-----TVIEMPCHHLFHSN 124

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+ ++ CP CR  +P
Sbjct: 125 CILPWLSKTNSCPLCRHELP 133

[Close]
BLAST of Cucsa.218700 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1 

Query: 171 IHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 224
           + C +CL E   EE      V++MPC H+FH  CI  WL+ ++ CP CR  +P
Sbjct: 86  LKCPVCLLEFEAEE-----TVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELP 133

[Close]
BLAST of Cucsa.218700 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-125
Identity = 225/253 (88.93%), Postives = 225/253 (88.93%), Query Frame = 1 

Query: 1   CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 60
           CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN
Sbjct: 11  CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 70

Query: 61  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 120
           TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW
Sbjct: 71  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 130

Query: 121 VTKVEEEEEDQENSTSSR----------------------------VLMMVPTSDSAMES 180
           VTKVEEEEEDQENSTSSR                            VLMMVPTSDSAMES
Sbjct: 131 VTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDSAMES 190

Query: 181 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS
Sbjct: 191 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 250

[Close]
BLAST of Cucsa.218700 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.7e-76
Identity = 155/253 (61.26%), Postives = 181/253 (71.54%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKCQHFQ+ E    ++
Sbjct: 14  GSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHS 73

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI SQH FATF+LPISI +HGDKTLK +LFREF MY DIINIE L +EIIK+WV
Sbjct: 74  TTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLANEIIKHWV 133

Query: 122 TKVEEEEEDQENST----------------SSRVL-------------MMVPTSDSAMES 181
            KVEEEE+ + NS                  S+++             +MVPTSDSA+ES
Sbjct: 134 RKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVES 193

Query: 182 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMK GDD+ I+CV+CLEEI KEEKGSE  VLQMPCLH+FH ECI KWL TS
Sbjct: 194 MLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTS 253

[Close]
BLAST of Cucsa.218700 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.9e-73
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KCQH+    E  ++T
Sbjct: 14  GSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNST 73

Query: 62  --TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKY 121
             T L+ EHI S HP  T +LP+SI +HGDKTLK LLFREF +YR IINIE +VDEIIK+
Sbjct: 74  FATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKH 133

Query: 122 WVTKVEEE----------------------------EEDQENSTSSRVLMMVPTSDSAME 181
           WV KV+EE                            ++  E       +MMVPTS+SAME
Sbjct: 134 WVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAME 193

Query: 182 SMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNT 226
           SMLK+VENEEI+K GD+  I+CVICLEEI KE+KGSE VVLQMPCLH+FH ECI KWL  
Sbjct: 194 SMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKR 253

[Close]
BLAST of Cucsa.218700 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.1e-73
Identity = 144/248 (58.06%), Postives = 178/248 (71.77%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQHF   EE ++  
Sbjct: 13  GYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFA 72

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI+SQ  F   +LPISI + GDKTLK LLF++F M+R I+N+E +VDEIIK+W+
Sbjct: 73  TTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEIIKHWI 132

Query: 122 TKVEEEEEDQENSTSS-----------------------RVLMMVPTSDSAMESMLKRVE 181
            KVEE++E+     +                        + +MMVPTSD+AMESMLKRVE
Sbjct: 133 RKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVE 192

Query: 182 -NEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPT 226
            NEE+MKLGDD  I CVICLE+IGKEEK S  VVLQMPCLH+FH ECI KWL TSH+CPT
Sbjct: 193 NNEELMKLGDDS-IDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPT 252

[Close]
BLAST of Cucsa.218700 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.3e-72
Identity = 145/252 (57.54%), Postives = 172/252 (68.25%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQHFQ  EE+T+  
Sbjct: 12  GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFA 71

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TT + EHI++  PF   +LP+SI +HGDKTLK LLF++F M+R IINIE + D+IIK+WV
Sbjct: 72  TTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWV 131

Query: 122 TKVEEEEE---------------------------DQENSTSSR-VLMMVPTSDSAMESM 181
            KVE+++E                           DQ   T  +  + MVPTSDSAM+SM
Sbjct: 132 KKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKSM 191

Query: 182 LKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSH 226
           LKRVENEEIMK+GD   I CVICLE+I KEEKGSEGVVLQMPCLH+FH ECI KWL TSH
Sbjct: 192 LKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSH 251

[Close]
BLAST of Cucsa.218700 vs. TAIR10
Match: AT3G47990.1 (AT3G47990.1 SUGAR-INSENSITIVE 3)

HSP 1 Score: 64.7 bits (156), Expect = 8.4e-11
Identity = 46/138 (33.33%), Postives = 67/138 (48.55%), Query Frame = 1 

Query: 93  KLLLFREFHMYR-----DIINIEHLVDEI-IKYWVTKVEEEEE---DQENSTSSRVLMMV 152
           K L  R+ H+ R      I     LVD I +  W  +   +E     Q+ +T    L + 
Sbjct: 147 KWLTRRQVHLLRAQQGIPISEFGILVDMIRVPDWAFEAAGQEMRGISQDAATYHPGLYLT 206

Query: 153 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEE--IGKEEKGSEGVVLQMPCLHVFH 212
           P    A+E++++ +    + K   DDC  C+ICLEE  IG E +G       +PC H FH
Sbjct: 207 PAQTEAVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRG-------LPCAHNFH 266

Query: 213 GECINKWLNTSHYCPTCR 220
            ECI++WL  +  CP CR
Sbjct: 267 VECIDQWLRLNVKCPRCR 276

[Close]
BLAST of Cucsa.218700 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 1 

Query: 173 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMPIN 226
           CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP++
Sbjct: 113 CVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of Cucsa.218700 vs. TAIR10
Match: AT3G46620.1 (AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 61.2 bits (147), Expect = 9.3e-10
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P S SA+ES L RVE  +     +    +C +C E     E G EG   +MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVF---EAGIEG--REMPCKHIFHGD 249

Query: 204 CINKWLNTSHYCPTCRFPMP 224
           CI  WL+  + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

[Close]
BLAST of Cucsa.218700 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 144 PTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGE 203
           P   S +E+M + V  E+  K G      C ICL+E  K +     V  +MPC H FH +
Sbjct: 84  PALKSEVENMPRVVIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSK 143

Query: 204 CINKWLNTSHYCPTCRFPMPI 225
           C+ +WL     CP CR+ MP+
Sbjct: 144 CVEEWLGRHATCPMCRYEMPV 155

[Close]
BLAST of Cucsa.218700 vs. TAIR10
Match: AT1G74620.1 (AT1G74620.1 RING/U-box superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1 

Query: 173 CVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPTCRFPMP 224
           C IC+E+  +       +V ++PC H FHG+CINKWL  +H CP CR  +P
Sbjct: 183 CAICMEDYIE----GSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

[Close]
BLAST of Cucsa.218700 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 6.2e-125
Identity = 225/253 (88.93%), Postives = 225/253 (88.93%), Query Frame = 1 

Query: 1   CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 60
           CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN
Sbjct: 11  CGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSN 70

Query: 61  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 120
           TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW
Sbjct: 71  TTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYW 130

Query: 121 VTKVEEEEEDQENSTSSR----------------------------VLMMVPTSDSAMES 180
           VTKVEEEEEDQENSTSSR                            VLMMVPTSDSAMES
Sbjct: 131 VTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMMVPTSDSAMES 190

Query: 181 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS
Sbjct: 191 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 250

[Close]
BLAST of Cucsa.218700 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 293.9 bits (751), Expect = 2.4e-76
Identity = 155/253 (61.26%), Postives = 181/253 (71.54%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSYMGM LRI D P  R +P  QI  + +SPT  +QI L F+VQLKCQHFQ+ E    ++
Sbjct: 14  GSYMGMSLRITD-PNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHS 73

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI SQH FATF+LPISI +HGDKTLK +LFREF MY DIINIE L +EIIK+WV
Sbjct: 74  TTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLANEIIKHWV 133

Query: 122 TKVEEEEEDQENST----------------SSRVL-------------MMVPTSDSAMES 181
            KVEEEE+ + NS                  S+++             +MVPTSDSA+ES
Sbjct: 134 RKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVES 193

Query: 182 MLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTS 226
           MLKRVENEEIMK GDD+ I+CV+CLEEI KEEKGSE  VLQMPCLH+FH ECI KWL TS
Sbjct: 194 MLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTS 253

[Close]
BLAST of Cucsa.218700 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 5.6e-73
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           GSY+GM LRI D P  R +PQ+QIRT  NSPT  KQIDLNF+V++KCQH+    E  ++T
Sbjct: 14  GSYIGMSLRITD-PDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNST 73

Query: 62  --TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKY 121
             T L+ EHI S HP  T +LP+SI +HGDKTLK LLFREF +YR IINIE +VDEIIK+
Sbjct: 74  FATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKH 133

Query: 122 WVTKVEEE----------------------------EEDQENSTSSRVLMMVPTSDSAME 181
           WV KV+EE                            ++  E       +MMVPTS+SAME
Sbjct: 134 WVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAME 193

Query: 182 SMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNT 226
           SMLK+VENEEI+K GD+  I+CVICLEEI KE+KGSE VVLQMPCLH+FH ECI KWL  
Sbjct: 194 SMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKR 253

[Close]
BLAST of Cucsa.218700 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 7.2e-73
Identity = 144/248 (58.06%), Postives = 178/248 (71.77%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D  ++ R+PQ+QI+T+ NSP   KQIDLNF++Q+KCQHF   EE ++  
Sbjct: 13  GYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQHFGAGEEGSTFA 72

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TTL+ EHI+SQ  F   +LPISI + GDKTLK LLF++F M+R I+N+E +VDEIIK+W+
Sbjct: 73  TTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEIIKHWI 132

Query: 122 TKVEEEEEDQENSTSS-----------------------RVLMMVPTSDSAMESMLKRVE 181
            KVEE++E+     +                        + +MMVPTSD+AMESMLKRVE
Sbjct: 133 RKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQEVMMVPTSDNAMESMLKRVE 192

Query: 182 -NEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSHYCPT 226
            NEE+MKLGDD  I CVICLE+IGKEEK S  VVLQMPCLH+FH ECI KWL TSH+CPT
Sbjct: 193 NNEELMKLGDDS-IDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIRKWLKTSHFCPT 252

[Close]
BLAST of Cucsa.218700 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.0e-71
Identity = 145/252 (57.54%), Postives = 172/252 (68.25%), Query Frame = 1 

Query: 2   GSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQHFQIREEETSNT 61
           G YMGM LRI D           I+TR NSPT  KQIDLNF+V++KCQHFQ  EE+T+  
Sbjct: 12  GYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFA 71

Query: 62  TTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIEHLVDEIIKYWV 121
           TT + EHI++  PF   +LP+SI +HGDKTLK LLF++F M+R IINIE + D+IIK+WV
Sbjct: 72  TTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWV 131

Query: 122 TKVEEEEE---------------------------DQENSTSSR-VLMMVPTSDSAMESM 181
            KVE+++E                           DQ   T  +  + MVPTSDSAM+SM
Sbjct: 132 KKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKSM 191

Query: 182 LKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMPCLHVFHGECINKWLNTSH 226
           LKRVENEEIMK+GD   I CVICLE+I KEEKGSEGVVLQMPCLH+FH ECI KWL TSH
Sbjct: 192 LKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSH 251

The following BLAST results are available for this feature:
BLAST of Cucsa.218700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIS3_ARATH1.5e-0933.33E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3 PE=2 SV=2[more]
RDUF1_ARATH1.6e-0842.50E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
SDIR1_ARATH3.1e-0735.16E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1[more]
RN181_RAT2.0e-0633.75E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE4.5e-0641.51E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
BLAST of Cucsa.218700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2A5_CUCSA4.4e-12588.93Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
E5GCQ3_CUCME1.7e-7661.26Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K7L0_CUCSA3.9e-7358.27Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
E5GCQ4_CUCME5.1e-7358.06Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K2A1_CUCSA7.3e-7257.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
BLAST of Cucsa.218700 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G47990.18.4e-1133.33 SUGAR-INSENSITIVE 3[more]
AT1G26800.15.4e-1052.83 RING/U-box superfamily protein[more]
AT3G46620.19.3e-1042.50 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G14200.12.1e-0937.04 RING/U-box superfamily protein[more]
AT1G74620.14.6e-0945.10 RING/U-box superfamily protein[more]
BLAST of Cucsa.218700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188572|gb|KGN43805.1|6.2e-12588.93hypothetical protein Csa_7G068580 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|2.4e-7661.26PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|700188568|gb|KGN43801.1|5.6e-7358.27hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|659111005|ref|XP_008455526.1|7.2e-7358.06PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
gi|700188567|gb|KGN43800.1|1.0e-7157.54hypothetical protein Csa_7G067550 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.218700.1Cucsa.218700.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 172..219
score: 7.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 173..218
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 173..219
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 172..219
score: 4.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 163..222
score: 1.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 142..223
score: 5.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 172..223
score: 6.25

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.218700Watermelon (97103) v2cgywmbB393
Cucsa.218700Watermelon (97103) v2cgywmbB395
Cucsa.218700Watermelon (97103) v2cgywmbB399
Cucsa.218700Wax gourdcgywgoB443
Cucsa.218700Wax gourdcgywgoB445
Cucsa.218700Wax gourdcgywgoB450
Cucsa.218700Cucumber (Gy14) v1cgycgyB119
Cucsa.218700Cucurbita maxima (Rimu)cgycmaB0620
Cucsa.218700Cucurbita maxima (Rimu)cgycmaB0622
Cucsa.218700Cucurbita maxima (Rimu)cgycmaB0624
Cucsa.218700Cucurbita maxima (Rimu)cgycmaB0627
Cucsa.218700Cucurbita maxima (Rimu)cgycmaB0629
Cucsa.218700Cucurbita moschata (Rifu)cgycmoB0623
Cucsa.218700Cucurbita moschata (Rifu)cgycmoB0624
Cucsa.218700Cucurbita moschata (Rifu)cgycmoB0627
Cucsa.218700Cucurbita moschata (Rifu)cgycmoB0629
Cucsa.218700Cucurbita moschata (Rifu)cgycmoB0632
Cucsa.218700Wild cucumber (PI 183967)cgycpiB335
Cucsa.218700Wild cucumber (PI 183967)cgycpiB336
Cucsa.218700Cucumber (Chinese Long) v2cgycuB322
Cucsa.218700Melon (DHL92) v3.5.1cgymeB379
Cucsa.218700Melon (DHL92) v3.5.1cgymeB380
Cucsa.218700Melon (DHL92) v3.5.1cgymeB383
Cucsa.218700Watermelon (Charleston Gray)cgywcgB391
Cucsa.218700Watermelon (Charleston Gray)cgywcgB393
Cucsa.218700Watermelon (Charleston Gray)cgywcgB396
Cucsa.218700Watermelon (Charleston Gray)cgywcgB399
Cucsa.218700Watermelon (97103) v1cgywmB415
Cucsa.218700Watermelon (97103) v1cgywmB421
Cucsa.218700Watermelon (97103) v1cgywmB422
Cucsa.218700Cucurbita pepo (Zucchini)cgycpeB0594
Cucsa.218700Cucurbita pepo (Zucchini)cgycpeB0596
Cucsa.218700Cucurbita pepo (Zucchini)cgycpeB0599
Cucsa.218700Cucurbita pepo (Zucchini)cgycpeB0601
Cucsa.218700Cucurbita pepo (Zucchini)cgycpeB0602
Cucsa.218700Bottle gourd (USVL1VR-Ls)cgylsiB364
Cucsa.218700Bottle gourd (USVL1VR-Ls)cgylsiB366
Cucsa.218700Bottle gourd (USVL1VR-Ls)cgylsiB367
Cucsa.218700Melon (DHL92) v3.6.1cgymedB377
Cucsa.218700Melon (DHL92) v3.6.1cgymedB381
Cucsa.218700Silver-seed gourdcarcgyB0221
Cucsa.218700Silver-seed gourdcarcgyB0338
Cucsa.218700Silver-seed gourdcarcgyB0435
Cucsa.218700Silver-seed gourdcarcgyB0524
Cucsa.218700Silver-seed gourdcarcgyB0824
Cucsa.218700Silver-seed gourdcarcgyB0825
Cucsa.218700Cucumber (Chinese Long) v3cgycucB342