Cucsa.185300.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAAAAGAAGTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAaGAAAagTAA GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGgaagaagaagaaggagaagaaggagaagaaaaagaagTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCaagaggaagaagaagaagaagaagaagaagaaAGAAAAGTAA GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAAAAGAAGTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAaGAAAagTAA GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEPTILAKRKKKKKKKKKEK*
BLAST of Cucsa.185300.1 vs. TrEMBL
Match: A0A0A0KJS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423330 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 5.7e-105 Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. TrEMBL
Match: A0A0D2RV63_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21 Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. TrEMBL
Match: A0A0D2NJU2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21 Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. TrEMBL
Match: V4SRJ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030533mg PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21 Identity = 81/215 (37.67%), Postives = 104/215 (48.37%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. TrEMBL
Match: B9S306_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1192800 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-20 Identity = 73/208 (35.10%), Postives = 110/208 (52.88%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. NCBI nr
Match: gi|778716564|ref|XP_011657559.1| (PREDICTED: uncharacterized protein LOC105435872 [Cucumis sativus]) HSP 1 Score: 388.3 bits (996), Expect = 8.2e-105 Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. NCBI nr
Match: gi|1009177193|ref|XP_015869837.1| (PREDICTED: protein EMBRYONIC FLOWER 1-like [Ziziphus jujuba]) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26 Identity = 86/215 (40.00%), Postives = 123/215 (57.21%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. NCBI nr
Match: gi|1009174145|ref|XP_015868196.1| (PREDICTED: uncharacterized protein LOC107405635 [Ziziphus jujuba]) HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24 Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. NCBI nr
Match: gi|720055619|ref|XP_010273442.1| (PREDICTED: uncharacterized protein LOC104608991 [Nelumbo nucifera]) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 86/232 (37.07%), Postives = 115/232 (49.57%), Query Frame = 1
BLAST of Cucsa.185300.1 vs. NCBI nr
Match: gi|823166967|ref|XP_012483432.1| (PREDICTED: uncharacterized protein LOC105798082 isoform X1 [Gossypium raimondii]) HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21 Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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