Cucsa.185300 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.185300
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01274 : 855208 .. 855801 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAAAAGAAGTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAaGAAAagTAA

mRNA sequence

GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGgaagaagaagaaggagaagaaggagaagaaaaagaagTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCaagaggaagaagaagaagaagaagaagaagaaAGAAAAGTAA

Coding sequence (CDS)

GGTTTAACGACAATTAGTTGGCCATTTAGTGAGAAGGTGAAGAAAGAAGTGGCAGAATCTCTACTTCCACCAATGGATGTAAAGAAATTCCGTTGGTGGTCGTCGTTATGGTTGTCATCACAGGAAGAAGAAGAAGGAGAAGAAGGAGAAGAAAAAGAAGTAATTACAGAGAGAATTAAAATGCAGAAGATTTGTCCGGTCTGCGGGGTTTTTGTTGCAGCCACGGTAGCAGCGGTAAATGCACATATTGATACTTGTTTAGCTCAAACAACAAGCAAGGAAATTAGGAGAAAGAACTATTTGAAGGCAAAATCAAGAACCCCAAAAAAGAGATCAATAGCCGAAATATTTGCAGTGGCTCCGCCAGTAAAAACAATGATTGTTGTTAATGATTGTTGTGAAGACGAAGAAGAAAAAAAGGCCGTTGGGAAACAAATTATTCATCACAACAAGAACCTCAAAACGACGTCGTTGGCTACAAGTCTTGTCTCTGCAATCAAGACAATCAAAAACAAAATCGCTACGACAACAGAAGAACCAACAATTCTTGCCAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAaGAAAagTAA

Protein sequence

GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEPTILAKRKKKKKKKKKEK*
Homology
[Close]
BLAST of Cucsa.185300 vs. TrEMBL
Match: A0A0A0KJS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423330 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 5.7e-105
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 1   GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK 60
           GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK
Sbjct: 21  GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK 80

Query: 61  MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA 120
           MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA
Sbjct: 81  MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA 140

Query: 121 PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP 180
           PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP
Sbjct: 141 PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP 200

Query: 181 TILAKRKKKKKKKKKE 197
           TILAKRKKKKKKKKK+
Sbjct: 201 TILAKRKKKKKKKKKK 216

[Close]
BLAST of Cucsa.185300 vs. TrEMBL
Match: A0A0D2RV63_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1 

Query: 10  SEKVKKEVAESLLPPMDVKKFRWWS------------SLWLSSQEEE-------EGEEGE 69
           + K+ K+  ES LPP+ V KFRWWS            ++  SS + +        GE+ +
Sbjct: 51  NRKISKQTMESFLPPITVTKFRWWSEELDRLKSTELANIQSSSNQSDFLQVNLHVGEKSD 110

Query: 70  EKEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIR--RKNYLKAKSRTP 129
           E+  + E       CPVCG F A+TV A+NAH+D+CLAQ + KE R  R +    KSRTP
Sbjct: 111 ERPDMLE-------CPVCGAFAASTVNALNAHVDSCLAQASRKERRQMRMSIKGTKSRTP 170

Query: 130 KKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKT 189
           KKRSI EIFAVAP +  +    D  +DE         ++  ++N     L   +    K 
Sbjct: 171 KKRSITEIFAVAPQIHKV----DALDDE--------NLLDEDENGSLEELNCKIEKPKKK 226

Query: 190 IKNKIATTTEEPTILAKRKKKKKKKKK 196
           +K K            K+KKKKK KKK
Sbjct: 231 MKKK------------KKKKKKKTKKK 226

[Close]
BLAST of Cucsa.185300 vs. TrEMBL
Match: A0A0D2NJU2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1 

Query: 10  SEKVKKEVAESLLPPMDVKKFRWWS------------SLWLSSQEEE-------EGEEGE 69
           + K+ K+  ES LPP+ V KFRWWS            ++  SS + +        GE+ +
Sbjct: 51  NRKISKQTMESFLPPITVTKFRWWSEELDRLKSTELANIQSSSNQSDFLQVNLHVGEKSD 110

Query: 70  EKEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIR--RKNYLKAKSRTP 129
           E+  + E       CPVCG F A+TV A+NAH+D+CLAQ + KE R  R +    KSRTP
Sbjct: 111 ERPDMLE-------CPVCGAFAASTVNALNAHVDSCLAQASRKERRQMRMSIKGTKSRTP 170

Query: 130 KKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKT 189
           KKRSI EIFAVAP +  +    D  +DE         ++  ++N     L   +    K 
Sbjct: 171 KKRSITEIFAVAPQIHKV----DALDDE--------NLLDEDENGSLEELNCKIEKPKKK 226

Query: 190 IKNKIATTTEEPTILAKRKKKKKKKKK 196
           +K K            K+KKKKK KKK
Sbjct: 231 MKKK------------KKKKKKKTKKK 226

[Close]
BLAST of Cucsa.185300 vs. TrEMBL
Match: V4SRJ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030533mg PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21
Identity = 81/215 (37.67%), Postives = 104/215 (48.37%), Query Frame = 1 

Query: 7   WPF-------SEKVKKEVAESLLPPMDVKKFRWWSSLW--LSSQEEEEGEEGEEKEVITE 66
           WPF       S++ K+EV E LLPP+ V KFRWWS     L S+E+E  E     E I +
Sbjct: 26  WPFGGDSDSISDEKKREVIEPLLPPITVTKFRWWSHELELLKSKEDENEESSSAVEEIPQ 85

Query: 67  RI-------------KMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYL--K 126
            I             K++ +CPV   F   TV  VNAH+D+CLA+ + +E RR+  L  K
Sbjct: 86  DITRNYDDDDDDDAEKLETVCPVFRQFAGGTVNVVNAHVDSCLAEASREERRRQLTLAVK 145

Query: 127 AKSRTPKKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSL 186
            KSR PKKRSI EIFAV+  ++ + V  D   D+E   AV  Q    N   +T       
Sbjct: 146 GKSRQPKKRSIVEIFAVSQQIQKVDVDAD---DDENLDAVDGQDDEMNSKSET------- 205

Query: 187 VSAIKTIKNKIATTTEEPTILAKRKKKKKKKKKEK 198
                                 K+KKKKKKKKK K
Sbjct: 206 ---------------------KKKKKKKKKKKKVK 209

[Close]
BLAST of Cucsa.185300 vs. TrEMBL
Match: B9S306_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1192800 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-20
Identity = 73/208 (35.10%), Postives = 110/208 (52.88%), Query Frame = 1 

Query: 7   WPFSEKV--KKEVAESLLPPMDVKKFRWWS-SLWLSSQEEEEGEEGEE------------ 66
           WPFS     K++V  +LLPP+ V KFRWWS  L   +Q++E+G+  EE            
Sbjct: 27  WPFSGGGGDKEQVEATLLPPITVTKFRWWSHELNKINQQKEQGQGLEEDHCLIGVSRNEA 86

Query: 67  KEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCL--AQTTSKEIRRKNYLKAKSRTPK 126
           KE      +++ +CPVCG F   ++   NAH++TCL  AQ   K+ +  +  K+KS++PK
Sbjct: 87  KEKEEGEDELEIVCPVCGNFATESMEVFNAHVNTCLAHAQREEKKAKTPSKSKSKSKSPK 146

Query: 127 KRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTI 186
           KRSI EIFAV+P V+ +   ++  +D++ K              K      + +   K I
Sbjct: 147 KRSILEIFAVSPQVEKVDDADEESDDDDGKDDYFNGQEQEEDEKKMMKKKKTKIKKTKKI 206

Query: 187 KNKIATTTEEPTILAKRKKKKKKKKKEK 198
           KN +  T  + T+  K+ K  KKKKK K
Sbjct: 207 KNVVIGT--KLTMDRKKNKWNKKKKKMK 232

[Close]
BLAST of Cucsa.185300 vs. NCBI nr
Match: gi|778716564|ref|XP_011657559.1| (PREDICTED: uncharacterized protein LOC105435872 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 8.2e-105
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 1   GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK 60
           GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK
Sbjct: 21  GLTTISWPFSEKVKKEVAESLLPPMDVKKFRWWSSLWLSSQEEEEGEEGEEKEVITERIK 80

Query: 61  MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA 120
           MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA
Sbjct: 81  MQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRRKNYLKAKSRTPKKRSIAEIFAVA 140

Query: 121 PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP 180
           PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP
Sbjct: 141 PPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEP 200

Query: 181 TILAKRKKKKKKKKKE 197
           TILAKRKKKKKKKKK+
Sbjct: 201 TILAKRKKKKKKKKKK 216

[Close]
BLAST of Cucsa.185300 vs. NCBI nr
Match: gi|1009177193|ref|XP_015869837.1| (PREDICTED: protein EMBRYONIC FLOWER 1-like [Ziziphus jujuba])

HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26
Identity = 86/215 (40.00%), Postives = 123/215 (57.21%), Query Frame = 1 

Query: 7   WPFSEKV--KKEVAESLLPPMDVKKFRWWS---SLWLSSQ---EEEEGEEGEEKEVITE- 66
           WPFSE++  K+E  E LLPP+ V K++WWS    L  S Q   +++E    E+  V+ E 
Sbjct: 26  WPFSEELLKKREAVEELLPPIAVAKYKWWSHELKLLRSDQTNIDDKESSRNEKLVVVVEG 85

Query: 67  -------RIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRR-KNYLKAKSRTPK 126
                    K + +CPVC VFVAATV AVNAHID CLAQ + +E R+ K  +KAKS+ PK
Sbjct: 86  KQAGEKLEEKSEMVCPVCRVFVAATVNAVNAHIDDCLAQASKEERRQMKKAMKAKSKAPK 145

Query: 127 KRSIAEIFAVAPPVKTM----IVVNDCCEDEEEKKAVGKQIIHHNK---NLKTTSLATSL 186
           KRSI EIFAVAP + T+       N+  E+   +K   +   + ++   +    S++TS 
Sbjct: 146 KRSITEIFAVAPQIDTIEEDFSDGNEGSEEGANEKDEDEDANNDDELADDFNVLSVSTSS 205

Query: 187 VSAIKTIKNKIATTTEEPTILAKRKKKKKKKKKEK 198
            +A + +KNK  TT        K+KKK+ K+  E+
Sbjct: 206 NAASQIMKNKKKTT--------KKKKKENKRAYEE 232

[Close]
BLAST of Cucsa.185300 vs. NCBI nr
Match: gi|1009174145|ref|XP_015868196.1| (PREDICTED: uncharacterized protein LOC107405635 [Ziziphus jujuba])

HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24
Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 1 

Query: 7   WPFSEKV--KKEVAESLLPPMDVKKFRWWS---SLWLSSQ---EEEEGEEGEEKEVITE- 66
           WPFSE++  K+E  E LLPP+ V K++WWS    L  S Q   +++E    E+  V+ E 
Sbjct: 26  WPFSEELLKKREAVEELLPPIAVAKYKWWSHELKLLRSDQTNIDDKESSRNEKLVVVVEG 85

Query: 67  -------RIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIRR-KNYLKAKSRTPK 126
                    K + +CPVC VFVAATV AVNAHID CLAQ + +E R+ K  +KAKS+ PK
Sbjct: 86  KQAGEKLEEKSEMVCPVCRVFVAATVNAVNAHIDDCLAQASKEERRQMKKAMKAKSKAPK 145

[Close]
BLAST of Cucsa.185300 vs. NCBI nr
Match: gi|720055619|ref|XP_010273442.1| (PREDICTED: uncharacterized protein LOC104608991 [Nelumbo nucifera])

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22
Identity = 86/232 (37.07%), Postives = 115/232 (49.57%), Query Frame = 1 

Query: 4   TISWPFS----EKVKKEVAESLLPPMDVKKFRWWSS---LWLSSQ----------EEEEG 63
           T  WPF     EK  KE  E LLPP+  +K+RWWS    L  S Q          E E+ 
Sbjct: 21  TKCWPFGGDGKEKTAKEEMEKLLPPLTYRKYRWWSDELELVRSKQVAEGSRKVREETEKP 80

Query: 64  EEGEEKEVITERI--------------KMQKICPVCGVFVAATVAAVNAHIDTCLAQTTS 123
             G E   ++ER               K+  ICPVC  F AATV AVNAHID+CLAQ + 
Sbjct: 81  VSGAESGFVSERPDLGAGKAGWGAEEEKLLMICPVCRSFTAATVNAVNAHIDSCLAQASR 140

Query: 124 KEIRRKN-------YLKAKSRTPKKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQ 183
           +E R+          +K+K+R PKKRSI EIFAVAP +K   V  D    E E+ +    
Sbjct: 141 EERRQMRTAAAAAAAVKSKTRAPKKRSIVEIFAVAPQIKKAEVDGD---GEAEEMS---- 200

Query: 184 IIHHNKNLKTTSLATSLVSAIKTIKNKIATTTEEPTILAKRKKKKKKKKKEK 198
                ++L +T    +  + +K  + +   + EE   LA++ K KKKK K+K
Sbjct: 201 ----EEDLDSTKYVEASDTVVK--RKRKHKSREEAVALARKLKLKKKKMKKK 239

[Close]
BLAST of Cucsa.185300 vs. NCBI nr
Match: gi|823166967|ref|XP_012483432.1| (PREDICTED: uncharacterized protein LOC105798082 isoform X1 [Gossypium raimondii])

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21
Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1 

Query: 10  SEKVKKEVAESLLPPMDVKKFRWWS------------SLWLSSQEEE-------EGEEGE 69
           + K+ K+  ES LPP+ V KFRWWS            ++  SS + +        GE+ +
Sbjct: 51  NRKISKQTMESFLPPITVTKFRWWSEELDRLKSTELANIQSSSNQSDFLQVNLHVGEKSD 110

Query: 70  EKEVITERIKMQKICPVCGVFVAATVAAVNAHIDTCLAQTTSKEIR--RKNYLKAKSRTP 129
           E+  + E       CPVCG F A+TV A+NAH+D+CLAQ + KE R  R +    KSRTP
Sbjct: 111 ERPDMLE-------CPVCGAFAASTVNALNAHVDSCLAQASRKERRQMRMSIKGTKSRTP 170

Query: 130 KKRSIAEIFAVAPPVKTMIVVNDCCEDEEEKKAVGKQIIHHNKNLKTTSLATSLVSAIKT 189
           KKRSI EIFAVAP +  +    D  +DE         ++  ++N     L   +    K 
Sbjct: 171 KKRSITEIFAVAPQIHKV----DALDDE--------NLLDEDENGSLEELNCKIEKPKKK 226

Query: 190 IKNKIATTTEEPTILAKRKKKKKKKKK 196
           +K K            K+KKKKK KKK
Sbjct: 231 MKKK------------KKKKKKKTKKK 226

The following BLAST results are available for this feature:
BLAST of Cucsa.185300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJS6_CUCSA5.7e-10599.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423330 PE=4 SV=1[more]
A0A0D2RV63_GOSRA3.0e-2136.71Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1[more]
A0A0D2NJU2_GOSRA3.0e-2136.71Uncharacterized protein OS=Gossypium raimondii GN=B456_006G007500 PE=4 SV=1[more]
V4SRJ9_9ROSI3.9e-2137.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030533mg PE=4 SV=1[more]
B9S306_RICCO2.0e-2035.10Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1192800 PE=4 SV=1[more]
BLAST of Cucsa.185300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778716564|ref|XP_011657559.1|8.2e-10599.49PREDICTED: uncharacterized protein LOC105435872 [Cucumis sativus][more]
gi|1009177193|ref|XP_015869837.1|3.4e-2640.00PREDICTED: protein EMBRYONIC FLOWER 1-like [Ziziphus jujuba][more]
gi|1009174145|ref|XP_015868196.1|9.3e-2449.64PREDICTED: uncharacterized protein LOC107405635 [Ziziphus jujuba][more]
gi|720055619|ref|XP_010273442.1|3.0e-2237.07PREDICTED: uncharacterized protein LOC104608991 [Nelumbo nucifera][more]
gi|823166967|ref|XP_012483432.1|4.3e-2136.71PREDICTED: uncharacterized protein LOC105798082 isoform X1 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.185300.1Cucsa.185300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.185300Cla005536Watermelon (97103) v1cgywmB350
Cucsa.185300Csa6G423330Cucumber (Chinese Long) v2cgycuB282
Cucsa.185300MELO3C014460Melon (DHL92) v3.5.1cgymeB333
Cucsa.185300ClCG09G022300Watermelon (Charleston Gray)cgywcgB326
Cucsa.185300CSPI06G22850Wild cucumber (PI 183967)cgycpiB292
Cucsa.185300CmaCh11G019500Cucurbita maxima (Rimu)cgycmaB0521
Cucsa.185300CmaCh19G010630Cucurbita maxima (Rimu)cgycmaB0524
Cucsa.185300CmoCh11G020300Cucurbita moschata (Rifu)cgycmoB0523
Cucsa.185300CmoCh19G010900Cucurbita moschata (Rifu)cgycmoB0526
Cucsa.185300Lsi11G016480Bottle gourd (USVL1VR-Ls)cgylsiB309
Cucsa.185300Cp4.1LG15g08610Cucurbita pepo (Zucchini)cgycpeB0504
Cucsa.185300Cp4.1LG04g02430Cucurbita pepo (Zucchini)cgycpeB0511
Cucsa.185300MELO3C014460.2Melon (DHL92) v3.6.1cgymedB328
Cucsa.185300CsaV3_6G037970Cucumber (Chinese Long) v3cgycucB297
Cucsa.185300Cla97C09G183750Watermelon (97103) v2cgywmbB337
Cucsa.185300Bhi05G001780Wax gourdcgywgoB379
Cucsa.185300Carg04658Silver-seed gourdcarcgyB0453
Cucsa.185300Carg15693Silver-seed gourdcarcgyB0611
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.185300Watermelon (97103) v2cgywmbB333
Cucsa.185300Wax gourdcgywgoB382
Cucsa.185300Cucurbita maxima (Rimu)cgycmaB0529
Cucsa.185300Cucurbita maxima (Rimu)cgycmaB0533
Cucsa.185300Cucurbita moschata (Rifu)cgycmoB0531
Cucsa.185300Cucurbita moschata (Rifu)cgycmoB0535
Cucsa.185300Cucumber (Chinese Long) v2cgycuB283
Cucsa.185300Watermelon (Charleston Gray)cgywcgB332
Cucsa.185300Watermelon (Charleston Gray)cgywcgB333
Cucsa.185300Watermelon (97103) v1cgywmB356
Cucsa.185300Watermelon (97103) v1cgywmB357
Cucsa.185300Cucurbita pepo (Zucchini)cgycpeB0509
Cucsa.185300Cucurbita pepo (Zucchini)cgycpeB0515
Cucsa.185300Bottle gourd (USVL1VR-Ls)cgylsiB308