Cucsa.182170.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.182170.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Nuclear factor Y subunit C
Location	scaffold01251 : 250280 .. 253312 (-)
Sequence length	1163

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGAACAAATAACCAAAGAAAAAATGTAACTTTTGCATTTCAAACCCCAACTAACAAACCAAATTAGCTCAATTATGACATGGGTCATCTTCCATTCTTCCCCATAGATCTCTTTCTCATCGGTTTTCCCTTTTTCCCTTTCAGGGTATCTAAGATCTTGTTTACTTGAGTATCATTTGTGTCTCTAAAAGGTAATTAAACTCTCTCTCTCTCTCTCTCTTTCTTTGCTTGATCCTTAATATTTGTGGGATTTCTTTCTGGGTTTGTTTGTTTGTTTTGTTATTTGATTTGGTTGGTTGTGGAAATTAATGGTTCTTTTTTATATTGATGTTGGTGATCTTCATTTGTAATCAACACAGCTTTAAAATCTATAAGAAGATTGGTTCTTTCTCAACTGCTTCTTGGGTTTTTTCTTTCATATGTTTTAGCCTTTTAGCTGTGGATATGAATTAGCCTATGTTACATTTGGTTGAAAGTATAATATCAATTCCCTTTCCTCACATAATTTTGTATCTTCTCTACCTTTTTGATGAATTGCGTCTGAGGGAAAGTAAAGTAGGGGGAGTTTCTATAAGGTTTCTGGTTGTGTTTAGGATTTGTTTTGGTAGACCATTTAATCATGATGCATAATGTGATATAGGTCAGGAAGCACATAGATATAGATTCTTGAACATATGGACTTCTGTAGTTTCAGCTTTGAGAATCTTCTGTAATGGCTTGAAACAAGTACTGTGCTGTGAATTTTGTTCATGAAAATGTCTTTTGATACCTTCTGATATTTCATAAAAACTACATGGATTTTTTACTTCCTCCCGAGATCTATTGATTTTTGTTGAAATCTTACTTTGATCGATGATTACTCTCTATATGTGTGTTGAGTTTGTTTTGGACAATTCAGTTCATGAATATGTATGAATCGGTCATTCTGATAGGTTGATTTGTTGATAATTAGGTGAAAAGTGATATATATCATGGTTTCTATCTTGTTAAGGTTCTGGATTATAGATTTCTATTACCTTTCTTTTAGTATAGCTATTTTTCTTTGGTTCTTTTTCCCAGTTAAAAATGTTATTTTTGTTTCCATTTCTAAACCTGCTTCAATTTGCATCTTATTCTTGATTATATTTAATATTTATCTGTGTCGTGCACATAGTTTGAATATTCCGTTTGTTGTTCCTTTCAAAAGCTGTTCGAGATTTATTTCAAAGTTCAACCGTGATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCGGTTGGCAGCGGAGGTCAGATAGCATATGGTAGCAATCTGTACCATCCCAACCAAATGTCTGTAGGTCCAACTTCGGGATCTGTCGTTACATCAGTCGGAGGCATTCAGTCTACGAGTCAACCTGGTGGAGCACAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCACACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATTTGAAAGATGAAGTACTCACGTCGATTCCAAGAGGATCAATGACAGTTGGGGGACCTGGAGATACACTTCCTTACTACATGCCATCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCAGTTATGGACCCAGCTATGTATGCTCCACAATCACACCCTTATATGGCTCCACAAATGTGGCAGCATGCACAAGATCAAGCCCCTCCTGATCAATAATAGCTTGCTGCATGGAGGTGAAGGCGAACCGTACGTCTTTCTTTGTTCCTTTTGTTACATCTCTTTTATTCAAAATGAAAGTTCTGTGGTGGTATATATATAATGCTTTTTTTGGTCTACTATCTTCTAGTAGATTTCACGTTTCTGAGGTTGTGTTTATTCAGAATTCAGATTCATTTCAGTCTTCGTGATGCATATTTTGTTGAAAACATTGGCTGTAAAGTGCATTATGAGTGTATTATCTCAATCATATACGCAGCTTACAATTTCCCTCTGAGTTGGAGCTTTAAATAAACTCTAGTTCCGTGTTCCATTTAATGTGATTATATTTAGACGAGACATTTGGACAGTAGGGTCAGGTTTGTATACCAAAAGTTATATGTTTGGAGTGTCTATTTCGTTTGTAAAGATTGGAGTTGACAATCCATGTTTATATTTGGTATTTGTGTATCTTAGACTATGAATTAAATCTGTGATACTAAGAACTGCATAAAACCCAACTTCTGAAGAAAAAAAAAAACCCTTTTAAGCTACAAGCTAACTTTTGTAATCACAATCCAACAAAATCGATGTTGAACCACGAGCTGTATGAGCTTTATACTGCAAAAACATCTCGTACCTTGTAACATTTCACAGTGGACTATCCAAACCTTGGCCTCTCAACTCTTGGTTACACAAATTCAAACTTTCAAGCTCATGAATCGAACACCTTCATAAATGGCCTCGTAGTTGGATTTTAGATTTCCATTTGGCCTATACTCACCATTTTCCTGTCAATTATTGCAGACGGAGTCGCCTCCAAAGCAAGCTCTATGAAGCCAAACCACACACACACAACAAACTGAAAGGAGAATTTACACTGAAGATTTGATCTGAAGCCCTACACTATACTTTCTGTAGATATTTTGCTTGACAAGATTCGATAATCGTGATTGAGCAAGAAAAAGTCTCTTCTTTTTCTATTCATGCTTTACTTCTATTCTGATATTGGGAAGGACAGTTGACAAATTGTATAACTTCATATGATACTCCA

mRNA sequence

CCCAGAACAAATAACCAAAGAAAAAATGGTATCTAAGATCTTGTTTACTTGAGTATCATTTGTGTCTCTAAAAGCTGTTCGAGATTTATTTCAAAGTTCAACCGTGATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCGGTTGGCAGCGGAGGTCAGATAGCATATGGTAGCAATCTGTACCATCCCAACCAAATGTCTGTAGGTCCAACTTCGGGATCTGTCGTTACATCAGTCGGAGGCATTCAGTCTACGAGTCAACCTGGTGGAGCACAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCACACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATTTGAAAGATGAAGTACTCACGTCGATTCCAAGAGGATCAATGACAGTTGGGGGACCTGGAGATACACTTCCTTACTACATGCCATCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCAGTTATGGACCCAGCTATGTATGCTCCACAATCACACCCTTATATGGCTCCACAAATGTGGCAGCATGCACAAGATCAAGCCCCTCCTGATCAATAATAGCTTGCTGCATGGAGGTGAAGGCGAACCACGGAGTCGCCTCCAAAGCAAGCTCTATGAAGCCAAACCACACACACACAACAAACTGAAAGGAGAATTTACACTGAAGATTTGATCTGAAGCCCTACACTATACTTTCTGTAGATATTTTGCTTGACAAGATTCGATAATCGTGATTGAGCAAGAAAAAGTCTCTTCTTTTTCTATTCATGCTTTACTTCTATTCTGATATTGGGAAGGACAGTTGACAAATTGTATAACTTCATATGATACTCCA

Coding sequence (CDS)

ATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCGGTTGGCAGCGGAGGTCAGATAGCATATGGTAGCAATCTGTACCATCCCAACCAAATGTCTGTAGGTCCAACTTCGGGATCTGTCGTTACATCAGTCGGAGGCATTCAGTCTACGAGTCAACCTGGTGGAGCACAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAGCTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCACACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATTTGAAAGATGAAGTACTCACGTCGATTCCAAGAGGATCAATGACAGTTGGGGGACCTGGAGATACACTTCCTTACTACATGCCATCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCAGTTATGGACCCAGCTATGTATGCTCCACAATCACACCCTTATATGGCTCCACAAATGTGGCAGCATGCACAAGATCAAGCCCCTCCTGATCAATAA

Protein sequence

MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQHAQDQAPPDQ*

Homology

[Close]

BLAST of Cucsa.182170.2 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.3e-75
Identity = 165/262 (62.98%), Postives = 182/262 (69.47%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y  N MS      +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTNPMST-----TAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIHQQQQQQ-LQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IHQQQQQQ L QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           PREDL+DEVL SIPRG++           Y+P+  AP +G PGM+MG P      Y P  
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAAGYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP-- 229

Query: 241 HPYMAPQMWQHAQDQAP--PDQ 260
           +PYM   MW   Q QAP  PDQ
Sbjct: 241 NPYMGQPMW---QQQAPDQPDQ 229

[Close]

BLAST of Cucsa.182170.2 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.6e-70
Identity = 149/249 (59.84%), Postives = 165/249 (66.27%), Query Frame = 1


Query: 12  MGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 71
           M   G    + YGSN Y  N M+  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 72  QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 131
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 132 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 191
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 192 IPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQH 251
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 252 -AQDQAPPD 259
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

[Close]

BLAST of Cucsa.182170.2 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.9e-58
Identity = 123/219 (56.16%), Postives = 145/219 (66.21%), Query Frame = 1


Query: 31  NQMSVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQY 90
           N     P++  +     G   ++  GGA       +Y H+ QQQQQQLQ     FW  Q 
Sbjct: 4   NNQQPPPSAAGIPPPPPGTTISAAGGGA-------SYHHLLQQQQQQLQ----LFWTYQR 63

Query: 91  QEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTE 150
           QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H E
Sbjct: 64  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 123

Query: 151 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDTLPYYM 210
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G M V      +PYY 
Sbjct: 124 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTASGVPYYY 183

Query: 211 PSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQ 250
           P    P  G  GM++G+P MDP     Q        +WQ
Sbjct: 184 PPMGQP-AGPGGMMIGRPAMDPNGVYVQPPSQAWQSVWQ 208

[Close]

BLAST of Cucsa.182170.2 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-57
Identity = 129/232 (55.60%), Postives = 149/232 (64.22%), Query Frame = 1


Query: 25  SNLYHPNQMSVGPTSGSVVTSV----GGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQ 84
           +N   P   SV P   +V T +     G  S    GGA        Y H+ QQQQQQLQ 
Sbjct: 7   NNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGA-------TYHHLLQQQQQQLQM 66

Query: 85  QLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILE 144
               FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILE
Sbjct: 67  ----FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILE 126

Query: 145 LTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGSMTV 204
           LT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V
Sbjct: 127 LTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMV 186

Query: 205 GGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQHA 252
                 +PYY P    P V   GM++G+P MDP+    Q        +WQ++
Sbjct: 187 APAASGVPYYYPPMGQPAVPG-GMMIGRPAMDPSGVYAQPPSQAWQSVWQNS 226

[Close]

BLAST of Cucsa.182170.2 vs. Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 2.3e-54
Identity = 116/177 (65.54%), Postives = 130/177 (73.45%), Query Frame = 1


Query: 54  QPGGAQLAQHQLAYQ--HIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKK 113
           Q G    A H    Q  H H   QQQ QQQLQ FW NQ QEIE  TDFKNH+LPLARIKK
Sbjct: 25  QSGPVNAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKK 84

Query: 114 IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDI 173
           IMKADEDVRMISAEAPV+FA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+
Sbjct: 85  IMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDV 144

Query: 174 FDFLVDIVPREDLKDEVLTSIPRGSM--TVGGPGDTLPYYM-----PSQHAPQVGAP 222
           FDFLVDI+PR++LK+E L  + +G++   VG P    PYY        QH PQ   P
Sbjct: 145 FDFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP----PYYYLQQQGMMQHWPQEQHP 196

[Close]

BLAST of Cucsa.182170.2 vs. TrEMBL
Match: A0A0A0LW22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570150 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 3.2e-148
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 241 PYMAPQMWQHAQDQAPPDQ 260
           PYMAPQMWQHAQDQAPPDQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Cucsa.182170.2 vs. TrEMBL
Match: A0A0B0N3J4_GOSAR (Nuclear transcription factor Y subunit C-9-like protein OS=Gossypium arboreum GN=F383_09501 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.4e-119
Identity = 212/254 (83.46%), Postives = 223/254 (87.80%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPP+MG +GSGGQ+ YG+N Y        P  GSVVTSVGGIQST QP GAQL
Sbjct: 1   MDQQGHGQPPAMGMMGSGGQVPYGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQ IH QQQQQLQQQLQ FW NQYQEIEKVTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVL SIPRG+M VGGP D L YYMP+QHAPQVG PGMIMGKPV+DPA+YA QSH
Sbjct: 181 REDLKDEVLASIPRGTMPVGGPADALSYYMPAQHAPQVGTPGMIMGKPVVDPAIYAQQSH 240

Query: 241 PYMAPQMWQHAQDQ 255
           PYMA QMW    +Q
Sbjct: 241 PYMAQQMWPPGPEQ 254

[Close]

BLAST of Cucsa.182170.2 vs. TrEMBL
Match: A0A0D2N311_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G242200 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.4e-119
Identity = 212/254 (83.46%), Postives = 223/254 (87.80%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPP+MG +GSGGQ+ YG+N Y        P  GSVVTSVGGIQST QP GAQL
Sbjct: 1   MDQQGHGQPPAMGMMGSGGQVPYGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQ IH QQQQQLQQQLQ FW NQYQEIEKVTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVL SIPRG+M VGGP D L YYMP+QHAPQVG PGMIMGKPV+DPA+YA QSH
Sbjct: 181 REDLKDEVLASIPRGTMPVGGPADALSYYMPAQHAPQVGTPGMIMGKPVVDPAIYAQQSH 240

Query: 241 PYMAPQMWQHAQDQ 255
           PYMA QMW    +Q
Sbjct: 241 PYMAQQMWPPGPEQ 254

[Close]

BLAST of Cucsa.182170.2 vs. TrEMBL
Match: M5W0Q0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010147mg PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 2.7e-118
Identity = 215/261 (82.38%), Postives = 227/261 (86.97%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MD QGH QP SMG VGSG Q+ YG+N Y  NQM   P  GSV  +VG IQSTSQ  GAQL
Sbjct: 1   MDPQGHNQPQSMGMVGSGAQLTYGTNPYQHNQMVGSPNPGSVAGTVGAIQSTSQSAGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIH QQQQQLQQQLQ+FW NQYQEI+KVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHHQQQQQLQQQLQSFWANQYQEIDKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVL SIPRG+++VGGPGD LPY YMP QHAPQVGAPGMIMGKP+MDP+MYA QS
Sbjct: 181 REDLKDEVLASIPRGTVSVGGPGDALPYCYMPPQHAPQVGAPGMIMGKPMMDPSMYAQQS 240

Query: 241 HPYMAPQMWQHA--QDQAPPD 259
           HPYM   MWQ A  Q Q+P D
Sbjct: 241 HPYMGQPMWQQAPEQQQSPSD 261

[Close]

BLAST of Cucsa.182170.2 vs. TrEMBL
Match: G7KYQ4_MEDTR (Nuclear transcription factor Y protein OS=Medicago truncatula GN=MTR_7g113680 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.8e-117
Identity = 214/258 (82.95%), Postives = 222/258 (86.05%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MD QGH Q P MG VGSG Q+ YGSN Y  NQM+  P  GSVVTSVGG+QST QP GAQL
Sbjct: 52  MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAP--GSVVTSVGGMQSTGQPAGAQL 111

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIHQQQQQQLQQQLQ+FW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 112 GQHQLAYQHIHQQQQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 171

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 172 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 231

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVL SIPRG+M V GP D LPY YMP QHA QVG  G+IMGKPVMDP MYA Q 
Sbjct: 232 REDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHASQVGTAGVIMGKPVMDPNMYAQQP 291

Query: 241 HPYMAPQMWQHAQDQAPP 258
           HPYMAPQMW    +Q PP
Sbjct: 292 HPYMAPQMWPQPPEQRPP 307

[Close]

BLAST of Cucsa.182170.2 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9)

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-76
Identity = 165/262 (62.98%), Postives = 182/262 (69.47%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y  N MS      +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTNPMST-----TAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIHQQQQQQ-LQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IHQQQQQQ L QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           PREDL+DEVL SIPRG++           Y+P+  AP +G PGM+MG P      Y P  
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAAGYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP-- 229

Query: 241 HPYMAPQMWQHAQDQAP--PDQ 260
           +PYM   MW   Q QAP  PDQ
Sbjct: 241 NPYMGQPMW---QQQAPDQPDQ 229

[Close]

BLAST of Cucsa.182170.2 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3)

HSP 1 Score: 265.0 bits (676), Expect = 4.9e-71
Identity = 149/249 (59.84%), Postives = 165/249 (66.27%), Query Frame = 1


Query: 12  MGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 71
           M   G    + YGSN Y  N M+  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 72  QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 131
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 132 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 191
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 192 IPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQH 251
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 252 -AQDQAPPD 259
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

[Close]

BLAST of Cucsa.182170.2 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1)

HSP 1 Score: 224.9 bits (572), Expect = 5.6e-59
Identity = 123/219 (56.16%), Postives = 145/219 (66.21%), Query Frame = 1


Query: 31  NQMSVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQY 90
           N     P++  +     G   ++  GGA       +Y H+ QQQQQQLQ     FW  Q 
Sbjct: 4   NNQQPPPSAAGIPPPPPGTTISAAGGGA-------SYHHLLQQQQQQLQ----LFWTYQR 63

Query: 91  QEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTE 150
           QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H E
Sbjct: 64  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 123

Query: 151 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDTLPYYM 210
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G M V      +PYY 
Sbjct: 124 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTASGVPYYY 183

Query: 211 PSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQ 250
           P    P  G  GM++G+P MDP     Q        +WQ
Sbjct: 184 PPMGQP-AGPGGMMIGRPAMDPNGVYVQPPSQAWQSVWQ 208

[Close]

BLAST of Cucsa.182170.2 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4)

HSP 1 Score: 224.2 bits (570), Expect = 9.5e-59
Identity = 129/232 (55.60%), Postives = 149/232 (64.22%), Query Frame = 1


Query: 25  SNLYHPNQMSVGPTSGSVVTSV----GGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQ 84
           +N   P   SV P   +V T +     G  S    GGA        Y H+ QQQQQQLQ 
Sbjct: 7   NNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGA-------TYHHLLQQQQQQLQM 66

Query: 85  QLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILE 144
               FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILE
Sbjct: 67  ----FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILE 126

Query: 145 LTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGSMTV 204
           LT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V
Sbjct: 127 LTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMV 186

Query: 205 GGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMAPQMWQHA 252
                 +PYY P    P V   GM++G+P MDP+    Q        +WQ++
Sbjct: 187 APAASGVPYYYPPMGQPAVPG-GMMIGRPAMDPSGVYAQPPSQAWQSVWQNS 226

[Close]

BLAST of Cucsa.182170.2 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55
Identity = 116/177 (65.54%), Postives = 130/177 (73.45%), Query Frame = 1


Query: 54  QPGGAQLAQHQLAYQ--HIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKK 113
           Q G    A H    Q  H H   QQQ QQQLQ FW NQ QEIE  TDFKNH+LPLARIKK
Sbjct: 25  QSGPVNAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKK 84

Query: 114 IMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDI 173
           IMKADEDVRMISAEAPV+FA+ACEMFILELTLR+W HTEENKRRTLQKNDIAAAI+RTD+
Sbjct: 85  IMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDV 144

Query: 174 FDFLVDIVPREDLKDEVLTSIPRGSM--TVGGPGDTLPYYM-----PSQHAPQVGAP 222
           FDFLVDI+PR++LK+E L  + +G++   VG P    PYY        QH PQ   P
Sbjct: 145 FDFLVDIIPRDELKEEGL-GVTKGTIPSVVGSP----PYYYLQQQGMMQHWPQEQHP 196

[Close]

BLAST of Cucsa.182170.2 vs. NCBI nr
Match: gi|778662518|ref|XP_011659897.1| (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 4.6e-148
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 241 PYMAPQMWQHAQDQAPPDQ 260
           PYMAPQMWQHAQDQAPPDQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Cucsa.182170.2 vs. NCBI nr
Match: gi|659099555|ref|XP_008450660.1| (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo])

HSP 1 Score: 523.1 bits (1346), Expect = 2.8e-145
Identity = 257/259 (99.23%), Postives = 257/259 (99.23%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHPNQM VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQP-SMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240

Query: 241 PYMAPQMWQHAQDQAPPDQ 260
           PYMAPQMWQHAQDQAPPDQ
Sbjct: 241 PYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of Cucsa.182170.2 vs. NCBI nr
Match: gi|502113373|ref|XP_004494629.1| (PREDICTED: nuclear transcription factor Y subunit C-3-like [Cicer arietinum])

HSP 1 Score: 442.2 bits (1136), Expect = 6.3e-121
Identity = 219/258 (84.88%), Postives = 226/258 (87.60%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MD QGH Q P MG VGSGGQ+ YGSN Y PNQM+  P  GSVVTSVGG+QS  QP GAQL
Sbjct: 1   MDHQGHNQNPPMGVVGSGGQMTYGSNPYQPNQMTGAP--GSVVTSVGGMQSAGQPAGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIHQQQQQQLQQQLQ FW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRG+M VGGP D+LPY YMP QHAPQVG  G+IMGKPVMDP MYA Q 
Sbjct: 181 REDLKDEVLTSIPRGTMPVGGPADSLPYCYMPPQHAPQVGTAGVIMGKPVMDPNMYAQQP 240

Query: 241 HPYMAPQMWQHAQDQAPP 258
           HPYMAPQMW    DQ PP
Sbjct: 241 HPYMAPQMWPQPPDQRPP 256

[Close]

BLAST of Cucsa.182170.2 vs. NCBI nr
Match: gi|1009117208|ref|XP_015875193.1| (PREDICTED: nuclear transcription factor Y subunit C-3-like [Ziziphus jujuba])

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119
Identity = 218/255 (85.49%), Postives = 227/255 (89.02%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MD QGH Q  SMG VG G Q+AYG+N Y  NQM+ GP   SV  S+G IQSTSQPGGAQL
Sbjct: 1   MDHQGHNQAQSMGMVGGGVQMAYGANPYQSNQMTGGPNPSSV-ASLGAIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQ+FW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEV+ SIPRG++ VGGP D LPY YMP QHAPQVGAPGMIMGKPVMDPAMYA QS
Sbjct: 181 REDLKDEVVASIPRGTVPVGGPADALPYCYMPPQHAPQVGAPGMIMGKPVMDPAMYAQQS 240

Query: 241 HPYMAPQMWQHAQDQ 255
           HPYMA QMWQ A DQ
Sbjct: 241 HPYMAQQMWQQAPDQ 254

[Close]

BLAST of Cucsa.182170.2 vs. NCBI nr
Match: gi|823153527|ref|XP_012476602.1| (PREDICTED: nuclear transcription factor Y subunit C-9-like [Gossypium raimondii])

HSP 1 Score: 436.4 bits (1121), Expect = 3.5e-119
Identity = 212/254 (83.46%), Postives = 223/254 (87.80%), Query Frame = 1


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPP+MG +GSGGQ+ YG+N Y        P  GSVVTSVGGIQST QP GAQL
Sbjct: 1   MDQQGHGQPPAMGMMGSGGQVPYGTNPYQNQVTGTAPNPGSVVTSVGGIQSTGQPTGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQ IH QQQQQLQQQLQ FW NQYQEIEKVTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQQIHHQQQQQLQQQLQAFWANQYQEIEKVTDFKNHNLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPYYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSH 240
           REDLKDEVL SIPRG+M VGGP D L YYMP+QHAPQVG PGMIMGKPV+DPA+YA QSH
Sbjct: 181 REDLKDEVLASIPRGTMPVGGPADALSYYMPAQHAPQVGTPGMIMGKPVVDPAIYAQQSH 240

Query: 241 PYMAPQMWQHAQDQ 255
           PYMA QMW    +Q
Sbjct: 241 PYMAQQMWPPGPEQ 254

The following BLAST results are available for this feature:

BLAST of Cucsa.182170.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NFYC9_ARATH	2.3e-75	62.98	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2...	[more]
NFYC3_ARATH	8.6e-70	59.84	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2...	[more]
NFYC1_ARATH	9.9e-58	56.16	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1...	[more]
NFYC4_ARATH	1.7e-57	55.60	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2...	[more]
NFYC2_ARATH	2.3e-54	65.54	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=2...	[more]

BLAST of Cucsa.182170.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW22_CUCSA	3.2e-148	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570150 PE=4 SV=1	[more]
A0A0B0N3J4_GOSAR	2.4e-119	83.46	Nuclear transcription factor Y subunit C-9-like protein OS=Gossypium arboreum GN...	[more]
A0A0D2N311_GOSRA	2.4e-119	83.46	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G242200 PE=4 SV=1	[more]
M5W0Q0_PRUPE	2.7e-118	82.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010147mg PE=4 SV=1	[more]
G7KYQ4_MEDTR	3.8e-117	82.95	Nuclear transcription factor Y protein OS=Medicago truncatula GN=MTR_7g113680 PE...	[more]

BLAST of Cucsa.182170.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08970.4	1.3e-76	62.98	nuclear factor Y, subunit C9	[more]
AT1G54830.2	4.9e-71	59.84	nuclear factor Y, subunit C3	[more]
AT3G48590.1	5.6e-59	56.16	nuclear factor Y, subunit C1	[more]
AT5G63470.1	9.5e-59	55.60	nuclear factor Y, subunit C4	[more]
AT1G56170.1	1.3e-55	65.54	nuclear factor Y, subunit C2	[more]

BLAST of Cucsa.182170.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662518\|ref\|XP_011659897.1\|	4.6e-148	100.00	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis sativus]	[more]
gi\|659099555\|ref\|XP_008450660.1\|	2.8e-145	99.23	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo]	[more]
gi\|502113373\|ref\|XP_004494629.1\|	6.3e-121	84.88	PREDICTED: nuclear transcription factor Y subunit C-3-like [Cicer arietinum]	[more]
gi\|1009117208\|ref\|XP_015875193.1\|	2.6e-119	85.49	PREDICTED: nuclear transcription factor Y subunit C-3-like [Ziziphus jujuba]	[more]
gi\|823153527\|ref\|XP_012476602.1\|	3.5e-119	83.46	PREDICTED: nuclear transcription factor Y subunit C-9-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.182170	Cucsa.182170	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.182170.2	Cucsa.182170.2-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.182170.2.three_prime_UTR.2	Cucsa.182170.2.three_prime_UTR.2	three_prime_UTR
Cucsa.182170.2.three_prime_UTR.1	Cucsa.182170.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.182170.2.five_prime_UTR.3	Cucsa.182170.2.five_prime_UTR.3	five_prime_UTR
Cucsa.182170.2.five_prime_UTR.2	Cucsa.182170.2.five_prime_UTR.2	five_prime_UTR
Cucsa.182170.2.five_prime_UTR.1	Cucsa.182170.2.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.182170.2.CDS.1	Cucsa.182170.2.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 103..166 score: 7.1
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 104..181 score: 8.2
IPR009072	Histone-fold	unknown	SSF47113	Histone-fold	coord: 69..175 score: 6.2
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 30..259 score: 8.7E
None	No IPR available	PANTHER	PTHR10252:SF49	SUBFAMILY NOT NAMED	coord: 30..259 score: 8.7E