Cucsa.177610.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTAAGCTCTAAAATTCTGAAGTTTATGCCCTTTTCTTTTCTTTCGAAGATTTCTGGCATGGAAAAGTTCCTAGATCCCTTTCTGTTTGAATGATGATCACTGATTCACTTATGTATGCAATTTTGATATTTGTAAATCTTCCACACCTTGTTTTACGGCAAATTTCAGGTTCTTGAACTTACTTTTTGAGTATGATGTGCAAAATTGTTTGCCCTTCTGTTTATAAAATTGAAAATTGTGACATGTTTGTTCTTCTACTAAGAACCTAGTTATTCATTTCACTCATCAGTAAGGGAATATGTGACTTACAAACAGAGGGATGGATCAAATTGACTGTGATCTAGTGTTTTATGTCTTTTGAATAAATGATGGCGTCTTCTTTATTTTTATTCAATATTCACGTCCTTTATTGCTGAATGATGCCTTTGCATTCTGTGTGATCAGATTTTCAATTCTGTTTAATAAGTACTAGCTTAGGATTAGTACTTTGTTTTTATAAATGTAGCAAATACCATTTTATGGCATACTAATATAGTAACTATTGTTAGGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGGTCTTTGTCAATTCTGATTTCAACATCTTTCCTTCGGTGGATTTTAACTGCACTTTGGTCCTCTTGTTTTGACACCATACTATTTGTCAGATCCTTATAGGATTAGATTTTTGATCAAGTGTCAGCACTACTGTGGATTGGTCTTTATGCTGTATCTTTCTCATTCATATTTTGTACATATCATTATTGGATTCTTCATCATGATTGATGCAAAATGTGGTTTATTTAAATTCTTTAAGCCTTGTGTTTGGAGTGTAAAAGATTGCTGAGAAACTTTTAAGGGACTTCCCTTGGGGAGTGGAGAAAGGCAAAGGTGCACATTTTGTGCGTTGAGCAATTCTTGGGAAGACTATGTACTTGGGAGGATTGTCTTTACAGAATTTAAGGTCTCATAACAAAGCATTATTGGCAAAATAGTTATGATGTTTTTCACTCGAGTCCTCCCTGTGGTATAGGATTATCGTGAGCATGTTTGATCTCATCCTTTTGATTGGATTTCAGGTGGGGTTAAAGGCATATTCATAAACATGTAGAAAGAAATTTCTATTAAGCTTCGATTCTTTTTTATTTGATTCAGTATGTGGTGGGTGATGGAAATGGTACTCTCTTTTGGGAAGGTAGGTGGTTCTGGGACTGATGTGCAGCATGCTCCCTAACATTTGCCATTTATATGCTACAAAAAATTGTTATGTTCCTGATGTTATCATACGGTCACAAAGCTCAATCACCCATTTGTTCAAGCTCCATTGTCCGAAGTAGATTGTGGATCTCCTTTCTCTATTGGATGATTTTGAATTTAGGAAGGGGAGAAGAGACCTTCAACTATGTAGTCCTAGCGCCTCCAAGGGTTTTTCTTGTGGATCCTTTTTTATTTTGCAGACCCCTCCCTTTCCAAGGGGTGCCTTTTTTTATTTTTGTTTTTTCTTTTATGTCTTTGGAAGATGAAAATCCCAAAAAAGGTGAAGTACATTGTCTGGGAGATTATTCATGTACTTCAGATAGAACATTGAGGAAGTTACCATCTTTGGTTAGGCCTTTCTATTGTATCTTGTGTTGGAGGGTTGAGGAAGATCTAGATCTTTTATTTTGGAATTGTGACTATGCTCAGTCATTTTGAGACCACTTCTTCAGCATGTTTAGCCTTGAGATAGCTTGTCACAAATCTTTTAATGCTATGTTCAGGTGTTTCTCCATCTGCCGTTACAAAGGATAATAGAGTTTTTTGGGGACTGAGAGGGAATCTTTTGATGTACGGTCCCTTCTGAGATCTAACCTCTTCCTTAGAGGCTGATTACGAGTTCCTTTAGTACATGTTTTGCTTGATTGAAGTTCCTTTCTTTTGGGTGCTCCCTTTTGTGCACTTGTTTTTTGTTCTTTCGTATCATAATTTTTTCTCTCAATGAAAGTTAGTCTTTTATTGCCCCCTCCAAAAAAAAAAAAACATTTTATTACCGGTATAAACCAATAACTTGAATAAATGTAAACTAGGAAACTTTATCTTTGGTTTTGAAAGGCAATTCAATCTTGGTGAGGAGTGTACATCAGCACTGCTTTGGTCTTTTTCCTTATCCTTTCATTAGTTACATGCATGCAAACTTATTCATGAAGTCCCATGTCTATTTTGTCCCCTTACTTTCAATGGTTACTTAAGCTACTCCTGCTTAACTAGTGTGTTTAAATACATTCTTTTCTGCTGGGCAAAGTTTTTTTCTTTATCATATGGTGCATTTCCTTTTTGTGGAGACTTCCCATTCCAATAGAAACTTTAAGTATGTTAAAAATCATTGCTATTACTCTATGCTGTCTACACCCTCCTATTTTCCATTCTTAGAAGGCAATATTAGCTATCAGATATCATCTCCTTTTCCCGCTGTTGCTCTTTGTAATATATTCATCCGAAGGAATGTATGCTTGCTGTTCTATTCTATTTTTGAAATGCTTGCTGATAATTTTTTCTATTGGCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGTTGGTTTTTGGTCAGATTATTTAAAATTTGGTTTTGAAATAAAAACAAATTAATGAATAAAAATTACAGTGCCAAATTAGTACAGTTTAGTTTGCACTCATGGATTAAGCTCGGACATCTATAAATGCAAAATTATATTGGTGAGAAGCATGTCCTTTGGATTTGATGCCTTCTTCAAAATTGAAAGGTTTTCTATTGTTGGCAATCATTTAGCTGTATAATTGATTCCAGATCTTCATTATAGATTTATAGATCTGGATATAATGGAGGCAGGGGTTATGACGCAATAAGTTTTTGATAAATTTCAATAGTTCTTTCTTGGATAATGAATTTGATGCAGTGCAAGATATTTACTAGAAGATCCGTACATTTTGTTGAAAGGAGAAAACCCACATCCATTTTGTACCCTTGTCAAGAGGGGGTGGGTGTGCTTGCTTGGTAGCATATATATATGACCTCAATCCCTCGACCTAAATCAAACTTAAATATCACCATTTGTTATGGTTTCTTCTCTGGGTTATTTCTTGTTTGCACTCTTAACCAGTTCTTTAGTTTATGAACAAACTGAATTCTTCTCAGAAGTGTTTTTTGTCCATAAGGTTGTTCTGCAAGAACTATTGGGCATACCTTTACCTGTGTTTCTGCTTTTTAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGGTGCGCTTTCTTTTCCCAGTTTAATTTCTATAGTTCTTTCATCTTTGTAATTCAGCAAATCCGATTGACAAGTTTTAACAACCGTTTGGTTAATTGATGTCCTCTTGGTCCCTTAGTCAACTATGATGTTGGTTATCTGTACATTCTAACTTCGGATATAAATTTGTTGCTTTCTGTTTGTACAATTCATCCAGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAAPLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRLALLLPPPIEQLRTDNVTGS*
BLAST of Cucsa.177610.1 vs. TrEMBL
Match: A0A0A0LCG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702620 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 7.8e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TrEMBL
Match: A0A0D2P631_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G035400 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 7.6e-43 Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TrEMBL
Match: A0A0B0MZH7_GOSAR (Intraflagellar transport protein OS=Gossypium arboreum GN=F383_07675 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 7.6e-43 Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TrEMBL
Match: A0A067JLK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05272 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 6.4e-42 Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TrEMBL
Match: A0A061E3E3_THECC (Hydroxyproline-rich glycoprotein family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005945 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41 Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TAIR10
Match: AT2G32840.1 (AT2G32840.1 proline-rich family protein) HSP 1 Score: 146.7 bits (369), Expect = 1.0e-35 Identity = 78/135 (57.78%), Postives = 99/135 (73.33%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. TAIR10
Match: AT1G04930.2 (AT1G04930.2 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26 Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. NCBI nr
Match: gi|778682864|ref|XP_004149622.2| (PREDICTED: mucin-2 isoform X1 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. NCBI nr
Match: gi|659123639|ref|XP_008461764.1| (PREDICTED: uncharacterized protein C11orf24 isoform X1 [Cucumis melo]) HSP 1 Score: 271.6 bits (693), Expect = 8.0e-70 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. NCBI nr
Match: gi|778682867|ref|XP_011651799.1| (PREDICTED: mucin-2 isoform X2 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 9.8e-52 Identity = 114/140 (81.43%), Postives = 114/140 (81.43%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. NCBI nr
Match: gi|659123641|ref|XP_008461766.1| (PREDICTED: uncharacterized protein C11orf24 isoform X2 [Cucumis melo]) HSP 1 Score: 205.3 bits (521), Expect = 7.0e-50 Identity = 111/140 (79.29%), Postives = 112/140 (80.00%), Query Frame = 1
BLAST of Cucsa.177610.1 vs. NCBI nr
Match: gi|1009106179|ref|XP_015873160.1| (PREDICTED: uncharacterized protein LOC107410261 [Ziziphus jujuba]) HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44 Identity = 94/140 (67.14%), Postives = 114/140 (81.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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