Cucsa.177610 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.177610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Hydroxyproline-rich glycoprotein
Location	scaffold01225 : 1585091 .. 1588874 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTAAGCTCTAAAATTCTGAAGTTTATGCCCTTTTCTTTTCTTTCGAAGATTTCTGGCATGGAAAAGTTCCTAGATCCCTTTCTGTTTGAATGATGATCACTGATTCACTTATGTATGCAATTTTGATATTTGTAAATCTTCCACACCTTGTTTTACGGCAAATTTCAGGTTCTTGAACTTACTTTTTGAGTATGATGTGCAAAATTGTTTGCCCTTCTGTTTATAAAATTGAAAATTGTGACATGTTTGTTCTTCTACTAAGAACCTAGTTATTCATTTCACTCATCAGTAAGGGAATATGTGACTTACAAACAGAGGGATGGATCAAATTGACTGTGATCTAGTGTTTTATGTCTTTTGAATAAATGATGGCGTCTTCTTTATTTTTATTCAATATTCACGTCCTTTATTGCTGAATGATGCCTTTGCATTCTGTGTGATCAGATTTTCAATTCTGTTTAATAAGTACTAGCTTAGGATTAGTACTTTGTTTTTATAAATGTAGCAAATACCATTTTATGGCATACTAATATAGTAACTATTGTTAGGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGGTCTTTGTCAATTCTGATTTCAACATCTTTCCTTCGGTGGATTTTAACTGCACTTTGGTCCTCTTGTTTTGACACCATACTATTTGTCAGATCCTTATAGGATTAGATTTTTGATCAAGTGTCAGCACTACTGTGGATTGGTCTTTATGCTGTATCTTTCTCATTCATATTTTGTACATATCATTATTGGATTCTTCATCATGATTGATGCAAAATGTGGTTTATTTAAATTCTTTAAGCCTTGTGTTTGGAGTGTAAAAGATTGCTGAGAAACTTTTAAGGGACTTCCCTTGGGGAGTGGAGAAAGGCAAAGGTGCACATTTTGTGCGTTGAGCAATTCTTGGGAAGACTATGTACTTGGGAGGATTGTCTTTACAGAATTTAAGGTCTCATAACAAAGCATTATTGGCAAAATAGTTATGATGTTTTTCACTCGAGTCCTCCCTGTGGTATAGGATTATCGTGAGCATGTTTGATCTCATCCTTTTGATTGGATTTCAGGTGGGGTTAAAGGCATATTCATAAACATGTAGAAAGAAATTTCTATTAAGCTTCGATTCTTTTTTATTTGATTCAGTATGTGGTGGGTGATGGAAATGGTACTCTCTTTTGGGAAGGTAGGTGGTTCTGGGACTGATGTGCAGCATGCTCCCTAACATTTGCCATTTATATGCTACAAAAAATTGTTATGTTCCTGATGTTATCATACGGTCACAAAGCTCAATCACCCATTTGTTCAAGCTCCATTGTCCGAAGTAGATTGTGGATCTCCTTTCTCTATTGGATGATTTTGAATTTAGGAAGGGGAGAAGAGACCTTCAACTATGTAGTCCTAGCGCCTCCAAGGGTTTTTCTTGTGGATCCTTTTTTATTTTGCAGACCCCTCCCTTTCCAAGGGGTGCCTTTTTTTATTTTTGTTTTTTCTTTTATGTCTTTGGAAGATGAAAATCCCAAAAAAGGTGAAGTACATTGTCTGGGAGATTATTCATGTACTTCAGATAGAACATTGAGGAAGTTACCATCTTTGGTTAGGCCTTTCTATTGTATCTTGTGTTGGAGGGTTGAGGAAGATCTAGATCTTTTATTTTGGAATTGTGACTATGCTCAGTCATTTTGAGACCACTTCTTCAGCATGTTTAGCCTTGAGATAGCTTGTCACAAATCTTTTAATGCTATGTTCAGGTGTTTCTCCATCTGCCGTTACAAAGGATAATAGAGTTTTTTGGGGACTGAGAGGGAATCTTTTGATGTACGGTCCCTTCTGAGATCTAACCTCTTCCTTAGAGGCTGATTACGAGTTCCTTTAGTACATGTTTTGCTTGATTGAAGTTCCTTTCTTTTGGGTGCTCCCTTTTGTGCACTTGTTTTTTGTTCTTTCGTATCATAATTTTTTCTCTCAATGAAAGTTAGTCTTTTATTGCCCCCTCCAAAAAAAAAAAAACATTTTATTACCGGTATAAACCAATAACTTGAATAAATGTAAACTAGGAAACTTTATCTTTGGTTTTGAAAGGCAATTCAATCTTGGTGAGGAGTGTACATCAGCACTGCTTTGGTCTTTTTCCTTATCCTTTCATTAGTTACATGCATGCAAACTTATTCATGAAGTCCCATGTCTATTTTGTCCCCTTACTTTCAATGGTTACTTAAGCTACTCCTGCTTAACTAGTGTGTTTAAATACATTCTTTTCTGCTGGGCAAAGTTTTTTTCTTTATCATATGGTGCATTTCCTTTTTGTGGAGACTTCCCATTCCAATAGAAACTTTAAGTATGTTAAAAATCATTGCTATTACTCTATGCTGTCTACACCCTCCTATTTTCCATTCTTAGAAGGCAATATTAGCTATCAGATATCATCTCCTTTTCCCGCTGTTGCTCTTTGTAATATATTCATCCGAAGGAATGTATGCTTGCTGTTCTATTCTATTTTTGAAATGCTTGCTGATAATTTTTTCTATTGGCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGTTGGTTTTTGGTCAGATTATTTAAAATTTGGTTTTGAAATAAAAACAAATTAATGAATAAAAATTACAGTGCCAAATTAGTACAGTTTAGTTTGCACTCATGGATTAAGCTCGGACATCTATAAATGCAAAATTATATTGGTGAGAAGCATGTCCTTTGGATTTGATGCCTTCTTCAAAATTGAAAGGTTTTCTATTGTTGGCAATCATTTAGCTGTATAATTGATTCCAGATCTTCATTATAGATTTATAGATCTGGATATAATGGAGGCAGGGGTTATGACGCAATAAGTTTTTGATAAATTTCAATAGTTCTTTCTTGGATAATGAATTTGATGCAGTGCAAGATATTTACTAGAAGATCCGTACATTTTGTTGAAAGGAGAAAACCCACATCCATTTTGTACCCTTGTCAAGAGGGGGTGGGTGTGCTTGCTTGGTAGCATATATATATGACCTCAATCCCTCGACCTAAATCAAACTTAAATATCACCATTTGTTATGGTTTCTTCTCTGGGTTATTTCTTGTTTGCACTCTTAACCAGTTCTTTAGTTTATGAACAAACTGAATTCTTCTCAGAAGTGTTTTTTGTCCATAAGGTTGTTCTGCAAGAACTATTGGGCATACCTTTACCTGTGTTTCTGCTTTTTAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGGTGCGCTTTCTTTTCCCAGTTTAATTTCTATAGTTCTTTCATCTTTGTAATTCAGCAAATCCGATTGACAAGTTTTAACAACCGTTTGGTTAATTGATGTCCTCTTGGTCCCTTAGTCAACTATGATGTTGGTTATCTGTACATTCTAACTTCGGATATAAATTTGTTGCTTTCTGTTTGTACAATTCATCCAGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA

mRNA sequence

AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA

Coding sequence (CDS)

AGTTAGAGACGACACTCTTTGTGTGGTTAGAGATCGAAAAGTTCGGATAACTGATGGGGCTTCTCTTTATGCACTTTGTCGATCATGGCTGAGGAATGGTTCTCAAGAAGAAAGCCAGCCACAATATGGAAGCTTTTTTAGGTCACTTCCGAGACCACTGCCCATCGCTGTGGCTGGTGCTGCTCCATTACAGAAAAAGGAAGTTGTCAAAGAAGAAGTTGACGAGAAAGATAAGGATGAGGGATCCATTGAGCACTTGTCAACGCAAGAGTTATTGAAAAGACATGTTAGACGTGCAAAGAAAGTCCGATCACGATTGAGAGAAGAACGGTTACAACGCATTGAAAGATACAAAACTAGACTCGCTCTTCTCCTTCCTCCTCCAATTGAGCAGTTGAGGACGGATAACGTTACTGGAAGCTGA

Protein sequence

VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAAPLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRLALLLPPPIEQLRTDNVTGS*

Homology

[Close]

BLAST of Cucsa.177610 vs. TrEMBL
Match: A0A0A0LCG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702620 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 7.8e-72
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 1   VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 60
           VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA
Sbjct: 217 VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 276

Query: 61  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 120
           APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR
Sbjct: 277 APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 336

Query: 121 LALLLPPPIEQLRTDNVTGS 141
           LALLLPPPIEQLRTDNVTGS
Sbjct: 337 LALLLPPPIEQLRTDNVTGS 356

[Close]

BLAST of Cucsa.177610 vs. TrEMBL
Match: A0A0D2P631_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G035400 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.6e-43
Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           +DD+L  VRDRKVRI+DGAS+Y+LCRSWLRNG  +E QPQYG  F+SLP+PLPI V G+ 
Sbjct: 157 KDDSLVNVRDRKVRISDGASIYSLCRSWLRNGFPDEPQPQYGDIFKSLPQPLPIPVTGSL 216

Query: 62  PLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRL 121
           P + ++  ++  ++K +DE S+E+LST++LLKRH+ RAKKVRSRLR+ERL+RI RYKTRL
Sbjct: 217 PKEAEDREEQVEEDKKEDEQSVENLSTEDLLKRHINRAKKVRSRLRQERLKRIVRYKTRL 276

Query: 122 ALLLPPPIEQLRTD 136
           ALLLPP +EQ R+D
Sbjct: 277 ALLLPPLVEQFRSD 290

[Close]

BLAST of Cucsa.177610 vs. TrEMBL
Match: A0A0B0MZH7_GOSAR (Intraflagellar transport protein OS=Gossypium arboreum GN=F383_07675 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.6e-43
Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           +DD+L  VRDRKVRI+DGAS+Y+LCRSWLRNG  +E QPQYG  F+SLP+PLPI V G+ 
Sbjct: 155 KDDSLVNVRDRKVRISDGASIYSLCRSWLRNGFPDEPQPQYGDIFKSLPQPLPIPVTGSL 214

Query: 62  PLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRL 121
           P + ++  ++  ++K +DE S+E+LST++LLKRH+ RAKKVRSRLR+ERL+RI RYKTRL
Sbjct: 215 PKEAEDREEQVEEDKKEDEQSVENLSTEDLLKRHINRAKKVRSRLRQERLKRIVRYKTRL 274

Query: 122 ALLLPPPIEQLRTD 136
           ALLLPP +EQ R+D
Sbjct: 275 ALLLPPLVEQFRSD 288

[Close]

BLAST of Cucsa.177610 vs. TrEMBL
Match: A0A067JLK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05272 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-42
Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           RD++L + RDRKV+I+D ASLYALCRSWLRNG  EESQP YG   +SLPRPLPIAV    
Sbjct: 223 RDESLTLFRDRKVKISDEASLYALCRSWLRNGFTEESQPHYGDVVKSLPRPLPIAVVDTH 282

Query: 62  PLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRL 121
             +K+   +EEV+E ++DE S++HLS Q+LLKRH++RAKKVR+RLRE RL+RI RYKTRL
Sbjct: 283 SPKKEG--EEEVEEDEEDEESVDHLSAQDLLKRHIKRAKKVRARLREGRLKRIARYKTRL 342

Query: 122 ALLLPPPIEQLRTDNVTGS 141
           ALLLPP +EQLR +   G+
Sbjct: 343 ALLLPPHVEQLRNETAAGN 359

[Close]

BLAST of Cucsa.177610 vs. TrEMBL
Match: A0A061E3E3_THECC (Hydroxyproline-rich glycoprotein family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005945 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           +DD+L  VRDRKVRITDGAS+YALCRSWLRNG  +E+QPQYG   +SLP+PLPI V    
Sbjct: 138 KDDSLVNVRDRKVRITDGASVYALCRSWLRNGFPDETQPQYGDVSKSLPQPLPIPVTDNL 197

Query: 62  PLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTRL 121
               ++  ++E ++K +DE S+E+LS Q+LLKRH+ RAKKVRSRLR+ERL+RI RYKTRL
Sbjct: 198 LKDTEDEEEQEQEDKKEDEQSVENLSAQDLLKRHIDRAKKVRSRLRQERLKRIARYKTRL 257

Query: 122 ALLLPPPIEQLRTDNVTGS 141
           ALLLPP +EQ R+D   G+
Sbjct: 258 ALLLPPLVEQFRSDAAAGN 276

[Close]

BLAST of Cucsa.177610 vs. TAIR10
Match: AT2G32840.1 (AT2G32840.1 proline-rich family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-35
Identity = 78/135 (57.78%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           RDD L +VR RKVRIT+GASLY+LCRSWLRNG+ E  +PQ       LP+PLP+     +
Sbjct: 205 RDDALVLVRKRKVRITEGASLYSLCRSWLRNGAHEGIKPQRIDMMTCLPKPLPVDKTETS 264

Query: 62  PLQKKEVVKEEV-DEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 121
               K++V+E + +E  +DE S++HLS  +LLKRH+ RAKKVR+RLREERL+RI RYK R
Sbjct: 265 --LPKDLVEEAICEEDKEDEESVKHLSESDLLKRHIDRAKKVRARLREERLKRIARYKAR 324

Query: 122 LALLLPPPIEQLRTD 136
           LALLLPP  EQ R +
Sbjct: 325 LALLLPPFGEQCRNE 337

[Close]

BLAST of Cucsa.177610 vs. TAIR10
Match: AT1G04930.2 (AT1G04930.2 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGAS-LYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 61
           +D  L VVR RKVRIT+G+S LY+L RSWL+NG+    QPQ     + LP+PLP+ +   
Sbjct: 233 KDGALAVVRGRKVRITEGSSSLYSLGRSWLKNGAHVGIQPQRSGIMKPLPKPLPVDLTTE 292

Query: 62  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 121
             +   +  +E  DE  +DE +++ LS ++LLKRH+ RAKKVR++LREER +RI RYK R
Sbjct: 293 TSVPD-DPDEESADEDKEDEEAVKQLSEKDLLKRHIERAKKVRAQLREERSRRIRRYKER 352

Query: 122 LALLL 126
           + L+L
Sbjct: 353 ITLIL 356

[Close]

BLAST of Cucsa.177610 vs. NCBI nr
Match: gi|778682864|ref|XP_004149622.2| (PREDICTED: mucin-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1


Query: 1   VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 60
           VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA
Sbjct: 217 VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 276

Query: 61  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 120
           APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR
Sbjct: 277 APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 336

Query: 121 LALLLPPPIEQLRTDNVTGS 141
           LALLLPPPIEQLRTDNVTGS
Sbjct: 337 LALLLPPPIEQLRTDNVTGS 356

[Close]

BLAST of Cucsa.177610 vs. NCBI nr
Match: gi|659123639|ref|XP_008461764.1| (PREDICTED: uncharacterized protein C11orf24 isoform X1 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 8.0e-70
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 1


Query: 1   VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 60
           VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSF RSLPRPLPIAVAGA
Sbjct: 218 VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFLRSLPRPLPIAVAGA 277

Query: 61  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 120
           AP QKKEVVKEEVDE+DKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR
Sbjct: 278 APSQKKEVVKEEVDEEDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 337

Query: 121 LALLLPPPIEQLRTDNVTGS 141
           LALLLPPPIEQLRTDNVTGS
Sbjct: 338 LALLLPPPIEQLRTDNVTGS 357

[Close]

BLAST of Cucsa.177610 vs. NCBI nr
Match: gi|778682867|ref|XP_011651799.1| (PREDICTED: mucin-2 isoform X2 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 9.8e-52
Identity = 114/140 (81.43%), Postives = 114/140 (81.43%), Query Frame = 1


Query: 1   VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 60
           VRDDTLCVVRDRK                          PQYGSFFRSLPRPLPIAVAGA
Sbjct: 217 VRDDTLCVVRDRK--------------------------PQYGSFFRSLPRPLPIAVAGA 276

Query: 61  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 120
           APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR
Sbjct: 277 APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 330

Query: 121 LALLLPPPIEQLRTDNVTGS 141
           LALLLPPPIEQLRTDNVTGS
Sbjct: 337 LALLLPPPIEQLRTDNVTGS 330

[Close]

BLAST of Cucsa.177610 vs. NCBI nr
Match: gi|659123641|ref|XP_008461766.1| (PREDICTED: uncharacterized protein C11orf24 isoform X2 [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 7.0e-50
Identity = 111/140 (79.29%), Postives = 112/140 (80.00%), Query Frame = 1


Query: 1   VRDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGA 60
           VRDDTLCVVRDRK                          PQYGSF RSLPRPLPIAVAGA
Sbjct: 218 VRDDTLCVVRDRK--------------------------PQYGSFLRSLPRPLPIAVAGA 277

Query: 61  APLQKKEVVKEEVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 120
           AP QKKEVVKEEVDE+DKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR
Sbjct: 278 APSQKKEVVKEEVDEEDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 331

Query: 121 LALLLPPPIEQLRTDNVTGS 141
           LALLLPPPIEQLRTDNVTGS
Sbjct: 338 LALLLPPPIEQLRTDNVTGS 331

[Close]

BLAST of Cucsa.177610 vs. NCBI nr
Match: gi|1009106179|ref|XP_015873160.1| (PREDICTED: uncharacterized protein LOC107410261 [Ziziphus jujuba])

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 94/140 (67.14%), Postives = 114/140 (81.43%), Query Frame = 1


Query: 2   RDDTLCVVRDRKVRITDGASLYALCRSWLRNGSQEESQPQYGSFFRSLPRPLPIAVAGAA 61
           RDDTL ++RDRKVRIT+GASLYALCRSWLRNG+ EESQPQYG   RSLP+P PI +    
Sbjct: 228 RDDTLAIIRDRKVRITEGASLYALCRSWLRNGAPEESQPQYGDAVRSLPKPSPIHMTNTD 287

Query: 62  PLQKKEVVKE-EVDEKDKDEGSIEHLSTQELLKRHVRRAKKVRSRLREERLQRIERYKTR 121
             +KKE  ++ E +E+ KDE S+EHLS+QELLKRHV+RAKK+R+RLREERL+RI RYK+R
Sbjct: 288 LPKKKEGEEDGEQEEEVKDEESVEHLSSQELLKRHVKRAKKIRARLREERLKRIARYKSR 347

Query: 122 LALLLPPPIEQLRTDNVTGS 141
           LALLLPP +EQ R D   G+
Sbjct: 348 LALLLPPLVEQFRNDAAAGT 367

The following BLAST results are available for this feature:

BLAST of Cucsa.177610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCG5_CUCSA	7.8e-72	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G702620 PE=4 SV=1	[more]
A0A0D2P631_GOSRA	7.6e-43	64.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G035400 PE=4 SV=1	[more]
A0A0B0MZH7_GOSAR	7.6e-43	64.18	Intraflagellar transport protein OS=Gossypium arboreum GN=F383_07675 PE=4 SV=1	[more]
A0A067JLK8_JATCU	6.4e-42	64.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05272 PE=4 SV=1	[more]
A0A061E3E3_THECC	2.4e-41	62.59	Hydroxyproline-rich glycoprotein family protein, putative isoform 2 OS=Theobroma...	[more]

BLAST of Cucsa.177610 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32840.1	1.0e-35	57.78	proline-rich family protein	[more]
AT1G04930.2	1.2e-26	48.80	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Cucsa.177610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778682864\|ref\|XP_004149622.2\|	1.1e-71	100.00	PREDICTED: mucin-2 isoform X1 [Cucumis sativus]	[more]
gi\|659123639\|ref\|XP_008461764.1\|	8.0e-70	97.86	PREDICTED: uncharacterized protein C11orf24 isoform X1 [Cucumis melo]	[more]
gi\|778682867\|ref\|XP_011651799.1\|	9.8e-52	81.43	PREDICTED: mucin-2 isoform X2 [Cucumis sativus]	[more]
gi\|659123641\|ref\|XP_008461766.1\|	7.0e-50	79.29	PREDICTED: uncharacterized protein C11orf24 isoform X2 [Cucumis melo]	[more]
gi\|1009106179\|ref\|XP_015873160.1\|	2.0e-44	67.14	PREDICTED: uncharacterized protein LOC107410261 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR028226	LIN37

Vocabulary: **Biological Process**
Term	Definition
GO:0007049	cell cycle

Vocabulary: **Cellular Component**
Term	Definition
GO:0017053	transcriptional repressor complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0008150	biological_process
cellular_component	GO:0031514	motile cilium
cellular_component	GO:0017053	transcriptional repressor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.177610.1	Cucsa.177610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028226	Protein LIN37	PFAM	PF15306	LIN37	coord: 15..124 score: 7.
None	No IPR available	PANTHER	PTHR37173	FAMILY NOT NAMED	coord: 2..140 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.177610	Cla017238	Watermelon (97103) v1	cgywmB334
Cucsa.177610	Csa3G702620	Cucumber (Chinese Long) v2	cgycuB268
Cucsa.177610	ClCG10G012660	Watermelon (Charleston Gray)	cgywcgB312
Cucsa.177610	CSPI03G29990	Wild cucumber (PI 183967)	cgycpiB278
Cucsa.177610	CmaCh14G010300	Cucurbita maxima (Rimu)	cgycmaB0497
Cucsa.177610	CmaCh01G002080	Cucurbita maxima (Rimu)	cgycmaB0499
Cucsa.177610	CmoCh14G010480	Cucurbita moschata (Rifu)	cgycmoB0499
Cucsa.177610	CmoCh01G002180	Cucurbita moschata (Rifu)	cgycmoB0501
Cucsa.177610	Lsi03G012340	Bottle gourd (USVL1VR-Ls)	cgylsiB297
Cucsa.177610	Cp4.1LG02g15580	Cucurbita pepo (Zucchini)	cgycpeB0487
Cucsa.177610	Cp4.1LG03g09140	Cucurbita pepo (Zucchini)	cgycpeB0489
Cucsa.177610	MELO3C030929.2	Melon (DHL92) v3.6.1	cgymedB312
Cucsa.177610	CsaV3_3G032460	Cucumber (Chinese Long) v3	cgycucB281
Cucsa.177610	Cla97C10G195520	Watermelon (97103) v2	cgywmbB317
Cucsa.177610	Bhi11G001216	Wax gourd	cgywgoB360
Cucsa.177610	Carg07306	Silver-seed gourd	carcgyB0858
Cucsa.177610	Carg11245	Silver-seed gourd	carcgyB0928

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.177610	Melon (DHL92) v3.5.1	cgymeB317