Cucsa.169470.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169470.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 272482 .. 272718 (-)
Sequence length	237

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA*

Homology

[Close]

BLAST of Cucsa.169470.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-22
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169470.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169470.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRL 76
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169470.1 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470.1 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLT
Sbjct: 20 SSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRL+VA
Sbjct: 80 IPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Cucsa.169470.1 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.4e-32
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGF K QL+VPKGHVA+YVGEIQRKRFVVPISYLN PSFQQLL+H+EEEFGFHHP G LT
Sbjct: 20 SGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF+DLTSRLQ++
Sbjct: 80 IPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Cucsa.169470.1 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-31
Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SG TK QL VPKGHVAVYVGEIQ KRFVVPISYLND SFQQLLS+AEEEFGFHHP GGLT
Sbjct: 20 SGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTS+LQV+
Sbjct: 80 IPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Cucsa.169470.1 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-31
Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+QLL HAEEEFGFHHP GGLT
Sbjct: 20 SGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF ++TS+LQ +
Sbjct: 80 IPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Cucsa.169470.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-24
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-23
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169470.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-23
Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S  + + L+VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLT
Sbjct: 24 SSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLT 83

Query: 61 IPCKEDAFVDLTSR 75
          IPC E+ F+DL SR
Sbjct: 84 IPCSEEIFIDLASR 97

[Close]

BLAST of Cucsa.169470.1 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470.1 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169470.1 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470.1 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-36
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKN+LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470.1 vs. NCBI nr
Match: gi|778669593|ref|XP_011649273.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.1e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLT
Sbjct: 20 SSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRL+VA
Sbjct: 80 IPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Cucsa.169470.1 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-33
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQL+VPKGHVAVYVGEIQ KRFVVPISYLN PSFQQLLS+AEEEFGFHHP GGLT
Sbjct: 20 SGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKED F+DLTSRLQV+
Sbjct: 80 IPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Cucsa.169470.1 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.3e-32
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGF K QL+VPKGHVA+YVGEIQRKRFVVPISYLN PSFQQLL+H+EEEFGFHHP G LT
Sbjct: 20 SGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF+DLTSRLQ++
Sbjct: 80 IPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of Cucsa.169470.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.2e-22	72.73	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	2.7e-22	72.73	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	3.5e-22	71.21	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	5.9e-22	71.21	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	5.9e-22	72.31	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of Cucsa.169470.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	7.0e-38	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	4.3e-35	93.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	4.4e-32	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.3e-31	88.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	1.7e-31	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]

BLAST of Cucsa.169470.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18080.1	6.7e-24	72.73	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.5e-23	72.73	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.5e-23	66.22	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	2.0e-23	71.21	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	3.3e-23	71.21	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169470.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206757\|gb\|KGN61876.1\|	1.0e-37	100.00	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	5.5e-36	96.15	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669593\|ref\|XP_011649273.1\|	6.1e-35	93.59	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	7.5e-33	89.74	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206761\|gb\|KGN61880.1\|	6.3e-32	84.62	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.169470	Cucsa.169470	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.169470.1	Cucsa.169470.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.169470.1.CDS.1	Cucsa.169470.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 8..74 score: 5.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 8..76 score: 8.8