Cucsa.169470 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 272482 .. 272718 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

TCAGGGTTTACCAAAAACCAACTGAATGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAAGGAAGCGCTTTGTGGTTCCGATATCTTACTTAAACGATCCATCGTTCCAGCAACTGCTCAGCCATGCAGAGGAAGAGTTTGGCTTTCATCATCCTCATGGGGGTCTAACTATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA*

Homology

[Close]

BLAST of Cucsa.169470 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-22
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-22
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169470 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.5e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169470 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRL 76
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169470 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.0e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLT
Sbjct: 20 SSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRL+VA
Sbjct: 80 IPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Cucsa.169470 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.4e-32
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGF K QL+VPKGHVA+YVGEIQRKRFVVPISYLN PSFQQLL+H+EEEFGFHHP G LT
Sbjct: 20 SGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF+DLTSRLQ++
Sbjct: 80 IPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Cucsa.169470 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-31
Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SG TK QL VPKGHVAVYVGEIQ KRFVVPISYLND SFQQLLS+AEEEFGFHHP GGLT
Sbjct: 20 SGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTS+LQV+
Sbjct: 80 IPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Cucsa.169470 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-31
Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+QLL HAEEEFGFHHP GGLT
Sbjct: 20 SGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF ++TS+LQ +
Sbjct: 80 IPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Cucsa.169470 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-24
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-23
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 71 LTSRLQ 77
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169470 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-23
Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S  + + L+VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLT
Sbjct: 24 SSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLT 83

Query: 61 IPCKEDAFVDLTSR 75
          IPC E+ F+DL SR
Sbjct: 84 IPCSEEIFIDLASR 97

[Close]

BLAST of Cucsa.169470 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169470 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 11 PKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDAFVD 70
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 71 LTSRLQ 77
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169470 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-36
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKN+LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLL+ AEEEFGFHHPHGGLT
Sbjct: 20 SGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRLQVA
Sbjct: 80 IPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169470 vs. NCBI nr
Match: gi|778669593|ref|XP_011649273.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 6.1e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          S FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQLLS AEEEFGFHHPHGGLT
Sbjct: 20 SSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAFVDLTSRL+VA
Sbjct: 80 IPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Cucsa.169470 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-33
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGFTKNQL+VPKGHVAVYVGEIQ KRFVVPISYLN PSFQQLLS+AEEEFGFHHP GGLT
Sbjct: 20 SGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGLT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKED F+DLTSRLQV+
Sbjct: 80 IPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Cucsa.169470 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 6.3e-32
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1  SGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLT 60
          SGF K QL+VPKGHVA+YVGEIQRKRFVVPISYLN PSFQQLL+H+EEEFGFHHP G LT
Sbjct: 20 SGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALT 79

Query: 61 IPCKEDAFVDLTSRLQVA 79
          IPCKEDAF+DLTSRLQ++
Sbjct: 80 IPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of Cucsa.169470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.2e-22	72.73	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	2.7e-22	72.73	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	3.5e-22	71.21	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	5.9e-22	71.21	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	5.9e-22	72.31	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of Cucsa.169470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	7.0e-38	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	4.3e-35	93.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	4.4e-32	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.3e-31	88.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	1.7e-31	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]

BLAST of Cucsa.169470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18080.1	6.7e-24	72.73	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.5e-23	72.73	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.5e-23	66.22	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	2.0e-23	71.21	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	3.3e-23	71.21	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206757\|gb\|KGN61876.1\|	1.0e-37	100.00	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	5.5e-36	96.15	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669593\|ref\|XP_011649273.1\|	6.1e-35	93.59	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	7.5e-33	89.74	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206761\|gb\|KGN61880.1\|	6.3e-32	84.62	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.169470.1	Cucsa.169470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 8..74 score: 5.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 8..76 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.169470	Cucumber (Gy14) v1	cgycgyB107
Cucsa.169470	Cucurbita maxima (Rimu)	cgycmaB0479
Cucsa.169470	Cucurbita maxima (Rimu)	cgycmaB0480
Cucsa.169470	Cucurbita moschata (Rifu)	cgycmoB0482
Cucsa.169470	Cucurbita moschata (Rifu)	cgycmoB0483
Cucsa.169470	Wild cucumber (PI 183967)	cgycpiB265
Cucsa.169470	Wild cucumber (PI 183967)	cgycpiB266
Cucsa.169470	Cucumber (Chinese Long) v2	cgycuB257
Cucsa.169470	Cucumber (Chinese Long) v2	cgycuB258
Cucsa.169470	Melon (DHL92) v3.5.1	cgymeB301
Cucsa.169470	Melon (DHL92) v3.5.1	cgymeB302
Cucsa.169470	Watermelon (Charleston Gray)	cgywcgB301
Cucsa.169470	Watermelon (97103) v1	cgywmB321
Cucsa.169470	Watermelon (97103) v1	cgywmB323
Cucsa.169470	Cucurbita pepo (Zucchini)	cgycpeB0466
Cucsa.169470	Cucurbita pepo (Zucchini)	cgycpeB0467
Cucsa.169470	Bottle gourd (USVL1VR-Ls)	cgylsiB281
Cucsa.169470	Bottle gourd (USVL1VR-Ls)	cgylsiB282
Cucsa.169470	Melon (DHL92) v3.6.1	cgymedB294
Cucsa.169470	Cucumber (Chinese Long) v3	cgycucB270
Cucsa.169470	Watermelon (97103) v2	cgywmbB304
Cucsa.169470	Watermelon (97103) v2	cgywmbB305
Cucsa.169470	Wax gourd	cgywgoB348