Cucsa.169400.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAATATCCTGAAAGGGAGAAGAAAAACCTTTGTCCACACAATTTTGTCAGATTCCCTCCATTTTTTCCCCTTAGTTGAGAGTAGAAATCATTAATCAATGTATAGTTAGCTTCAAAGTGTTAATGATCGGGTAGCTGAAAGGTGATAGCACATTGCCCATCTACCTGAACATCATTTACACAACTTACAATTCAAATCTGTAAACATGGAAACAGAAATACAGAGTCATATTATCTTACTAAAGGACTTCCCTTCTTGGTGAATTCTTCAACATTCATAAATTTTtAAGTTTTtCCATTCAATTCCCATGAAAAGTTATTTGGATATATCATATTACAAATCATTTTCCCTGATGGCACTCGTAAGATGTATAGTAATCAGAAAATTAAAAATGTTCTCATTGAAAGGACACCATTGTCATTAA ATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATCTTCAAAGTGTTAATGATCGGGTAGCTGAAAGAAAATTAAAAATGTTCTCATTGAAAGGACACCATTGTCATTAA ATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATCTTCAAAGTGTTAATGATCGGGTAGCTGAAAGAAAATTAAAAATGTTCTCATTGAAAGGACACCATTGTCATTAA MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDLQSVNDRVAERKLKMFSLKGHHCH*
BLAST of Cucsa.169400.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 8.0e-18 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17 Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.3e-17 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 3.0e-32 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.9e-22 Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TrEMBL
Match: A0A061DZI1_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.3e-22 Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TrEMBL
Match: A0A061DZI1_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 SV=1) HSP 1 Score: 30.4 bits (67), Expect = 1.4e+03 Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 1
HSP 2 Score: 110.5 bits (275), Expect = 1.1e-21 Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TrEMBL
Match: V4UBZ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030213mg PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-21 Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.2e-21 Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 8.2e-21 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 93.6 bits (231), Expect = 6.9e-20 Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.0 bits (227), Expect = 2.0e-19 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 4.4e-32 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 4.4e-32 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 7.0e-22 Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. NCBI nr
Match: gi|590684897|ref|XP_007041961.1| (SAUR-like auxin-responsive protein family [Theobroma cacao]) HSP 1 Score: 111.3 bits (277), Expect = 9.1e-22 Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of Cucsa.169400.1 vs. NCBI nr
Match: gi|590684897|ref|XP_007041961.1| (SAUR-like auxin-responsive protein family [Theobroma cacao]) HSP 1 Score: 30.4 bits (67), Expect = 2.0e+03 Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 1
HSP 2 Score: 110.5 bits (275), Expect = 1.6e-21 Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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