Cucsa.132950.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTCTCTGGATTCATTTCTTGTGGGATGTGTATCATCAACTCTGATTTTGCTTTTGATTTTGGCTTTGGCTTTGATTTTGGTAATTTTTTGTTGTTCTAATGATGGGACGAGGAAGAATAATAGAAGGGGTCCGTGGGTTGATCAGTTCGTTTCTTGGGAGCCTAGAGCTTTCATTTGCCACAATTTCCTGGCAAGTTCTTACAATCTCAGCTTCAAATTATGTTCGAATGTTTCTAGTATATACTATATACGTTTTTGTATTTGCTGCTTCATTGTTCGATTTCTTAACAATATGTTTGAACATGCTTTTTGTTAAACAGTCAGAGAAAGAATGCTTGCAGTTGATTAATCTTGCAAAACCTCACATGAGGAGATCAAAATTTATATGATACCACACTTCGCAAGAATGTAACGACAAGGTCTAGATTTTTGTGTCACTTGGTTAGACTAATGCGTAGGACTCGTGTGATCCTTGCACAAGGGCGGCCACCACCAAGTCAGGACTTTGTAGGGGCAAATGACAGGTCATGAGGTGCAAAATGAAAAATGATCAATACAAATGCAGGTCGGATATTGAATATTGAAGAAGGGGgCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAaGATGGGAGATGCATTATTTTtCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAGTTTGCATGGTTAGTGATATGTTTACAACACCAAAATCTTACATATTTTAACCATGTTAAAAGAGTTTTACAATGATTTTGTTTCTATTCTCAAATATTGTTTTTGTTAACTATTTATTTGCGAGTGTCCATTACATACTTCCAATATGTTGTCTGATATATGTATAGGTTCCTACCCCGTTATAAGAGGGGACGAATGGGCATGTGTAAAGCTCATGGATGATTAGAACACAAAACTTAACTGAGGTAAGTTATACAATTCTTTAGATCATCTATACTTTTCCAAATTGGTCCAATTTTAAATTTCCTTTTCTATCTGTACCAATATAATTCTCATCTAGAACCTCAATATATTAAGTTAAAGAAGGTGCATGGATATATTTCCAGAACTTAAATCATGCAATAAATATTTAAAATAAAAATATAGTACTAAAAGGTAAGGAATATACATTATGTTTTTtGTTTCCGAGTTTATAGATAATAGGTCAATTTTGTAACACAATCAAAGTTTAAGAAATAGTGATGCATGTCTCATATAAGTACTTTGATGTAATCAAATTGCAGGGTAATCGAACCACAAGTATTAGTGGAGAAGATGAGAAGAGACTCACATTTTTTTTTTtAGATATATGATCGAGAATCAGTTTTGTTGATTAGTTACTCTATATCGAGATATATATAGGATCAATTTTGATTTATTTTTGAATCTTTTTATATATTGATCCATTTCTGTTTGGTTATGGATAAACATGGTTTCGATAATTTGACAAAAAAaGTTTATGATAAAACCTTTGTATTTATGGACATTTTTATCATACAAAAAATTCTAAATACTTAACCACCTCCCAAATATAATGTTAAAATGAAAATCTAGAAAGCCATATTtCTTTTTTTTTTttttGTTtGAACAATAAATAAGAAGTGTGGAAGCAGGATACTATTTCCAAGAAAATATAATATATAA ATGCGTTCTCTGGATTCATTTCTTGTGGGATGTGTATCATCAACTCTGATTTTGCTTTTGATTTTGGCTTTGGCTTTGATTTTGGTAATTTTTTGTTGTTCTAATGATGGGACGAGGAAGAATAATAGAAGGGGTCCGTGGGTTGATCAGTTCGTTTCTTGGGAGCCTAGAGCTTTCATTTGCCACAATTTCCTGGCAAGTCGGATATTGAATATTGAAGAAGGGGGCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAAGATGGGAGATGCATTATTTTTCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAGTTTGCATGGTTCCTACCCCGTTATAAGAGGGGACGAATGGTGTGGAAGCAGGATACTATTTCCAAGaaaatataatatataa ATGCGTTCTCTGGATTCATTTCTTGTGGGATGTGTATCATCAACTCTGATTTTGCTTTTGATTTTGGCTTTGGCTTTGATTTTGGTAATTTTTTGTTGTTCTAATGATGGGACGAGGAAGAATAATAGAAGGGGTCCGTGGGTTGATCAGTTCGTTTCTTGGGAGCCTAGAGCTTTCATTTGCCACAATTTCCTGGCAAGTCGGATATTGAATATTGAAGAAGGGGgCGAGACGGTGTTCCCGGCTGCGAACAAATGCGTCAGCTCTGTGCCATGGTGGAAGAAATTGCCTACACATGGTAAAGATGGACTCTCTATAAAACCAAaGATGGGAGATGCATTATTTTtCTGGAGCATGAAACCTGATGGTACATTGGATTATACGAGTTTGCATGGTTCCTACCCCGTTATAAGAGGGGACGAATGGTGTGGAAGCAGGATACTATTTCCAAGAAAATATAATATATAA MRSLDSFLVGCVSSTLILLLILALALILVIFCCSNDGTRKNNRRGPWVDQFVSWEPRAFICHNFLASRILNIEEGGETVFPAANKCVSSVPWWKKLPTHGKDGLSIKPKMGDALFFWSMKPDGTLDYTSLHGSYPVIRGDEWCGSRILFPRKYNI*
BLAST of Cucsa.132950.1 vs. Swiss-Prot
Match: P4H3_ARATH (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana GN=P4H3 PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 1
HSP 2 Score: 33.9 bits (76), Expect = 1.9e+00 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. Swiss-Prot
Match: P4H10_ARATH (Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana GN=P4H10 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.2e-23 Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 1
HSP 2 Score: 34.3 bits (77), Expect = 1.5e+00 Identity = 24/72 (33.33%), Postives = 36/72 (50.00%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. Swiss-Prot
Match: P4H8_ARATH (Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana GN=P4H8 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 4.0e-22 Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 1
HSP 2 Score: 33.1 bits (74), Expect = 3.3e+00 Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. Swiss-Prot
Match: P4H5_ARATH (Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana GN=P4H5 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20 Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 1
HSP 2 Score: 30.8 bits (68), Expect = 1.6e+01 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. Swiss-Prot
Match: P4H13_ARATH (Prolyl 4-hydroxylase 13 OS=Arabidopsis thaliana GN=P4H13 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TrEMBL
Match: A0A103Y5K3_CYNCS (Prolyl 4-hydroxylase, alpha subunit OS=Cynara cardunculus var. scolymus GN=Ccrd_018785 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.3e-29 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TrEMBL
Match: G7LB32_MEDTR (Prolyl 4-hydroxylase alpha-like protein OS=Medicago truncatula GN=MTR_8g074810 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 8.7e-24 Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TrEMBL
Match: G7LB32_MEDTR (Prolyl 4-hydroxylase alpha-like protein OS=Medicago truncatula GN=MTR_8g074810 PE=4 SV=1) HSP 1 Score: 41.2 bits (95), Expect = 1.4e+00 Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 1
HSP 2 Score: 116.7 bits (291), Expect = 2.5e-23 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TrEMBL
Match: A0A0A0LFF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009620 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.5e-23 Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TrEMBL
Match: A0A0A0LFF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009620 PE=4 SV=1) HSP 1 Score: 37.4 bits (85), Expect = 2.0e+01 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
HSP 2 Score: 116.3 bits (290), Expect = 3.3e-23 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TAIR10
Match: AT1G20270.1 (AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 114.4 bits (285), Expect = 6.4e-26 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 1
HSP 2 Score: 33.9 bits (76), Expect = 1.1e-01 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TAIR10
Match: AT5G66060.1 (AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 3.5e-24 Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 1
HSP 2 Score: 34.3 bits (77), Expect = 8.4e-02 Identity = 24/72 (33.33%), Postives = 36/72 (50.00%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TAIR10
Match: AT4G35810.1 (AT4G35810.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23 Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 1
HSP 2 Score: 33.1 bits (74), Expect = 1.9e-01 Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TAIR10
Match: AT2G17720.1 (AT2G17720.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21 Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 1
HSP 2 Score: 30.8 bits (68), Expect = 9.3e-01 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. TAIR10
Match: AT2G23096.1 (AT2G23096.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. NCBI nr
Match: gi|976917476|gb|KVI02929.1| (Prolyl 4-hydroxylase, alpha subunit [Cynara cardunculus var. scolymus]) HSP 1 Score: 135.6 bits (340), Expect = 7.6e-29 Identity = 62/115 (53.91%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. NCBI nr
Match: gi|357517881|ref|XP_003629229.1| (prolyl 4-hydroxylase alpha-like protein [Medicago truncatula]) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23 Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. NCBI nr
Match: gi|357517881|ref|XP_003629229.1| (prolyl 4-hydroxylase alpha-like protein [Medicago truncatula]) HSP 1 Score: 41.2 bits (95), Expect = 1.9e+00 Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 1
HSP 2 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. NCBI nr
Match: gi|659070731|ref|XP_008456388.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X2 [Cucumis melo]) HSP 1 Score: 37.7 bits (86), Expect = 2.1e+01 Identity = 25/73 (34.25%), Postives = 35/73 (47.95%), Query Frame = 1
HSP 2 Score: 117.5 bits (293), Expect = 2.1e-23 Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 1
BLAST of Cucsa.132950.1 vs. NCBI nr
Match: gi|659070723|ref|XP_008456352.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cucumis melo]) HSP 1 Score: 37.4 bits (85), Expect = 2.8e+01 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
HSP 2 Score: 117.1 bits (292), Expect = 2.8e-23 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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