Cucsa.084710.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.084710.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	CUGBP Elav-like family member 5
Location	scaffold00862 : 381989 .. 384949 (+)
Sequence length	1474

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATGAACCATACCTCTGATAAAATAAaTGCCTTTCAATTTTTCCGTGAAATCTGTAATTAAACATTGTTCTTGTCAATGtGTGTAGTAATACCCTTCATTCTCTCTTCAATCCAGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGGTGTAATATCATTCCcTGCTTGAATATCTCATCTAAAAGATGGTTCCTAACATCCATCAACCTACATTGCCACTTTCTTAACGATCTTGTATTTATCTTCCTGAAAGATTAATATTTAGTTTGTATGGATAGTAATGGTTGGTTATTTCTGAAAAGAGCAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTAtGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTAGTTTTTGGTTTGTTTCAGCTTGATTTAGTTGAAGTTGTGAAAGATATCACACATTCAGTTGAATCTTCACCATTAGCTCCATGTGTTGCTCATGTTCAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGTAATGGAATTTTCATGATATTTCCGGAAAAAGATAGGAGGTTAATACTAAAATCATTGAAATCATAGAAAGCCTATATATTGCTGAAAATCCATATTCACGTCGTTGATATTTTGTACCTTTGTGGGCACTTCTAATATTTCCCGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTtATCATTATTCAAGTCAAATTCAATGTACTCAATAGTTGAGTcTTCTTGCATAAGGCAACGTTATTTTAGGGCTGACATATTATGAAAATCCTAGCTTCCTGTAAGTAGGATAGTCTGTCTTAATACTCATATCTTTTACCCCGTTGAAAGTATGGAAGACTATGAATTTATACTTACAGACATAGGTTTACGGAGGCATCATGTATTTGATTATTTTtCCCCCTACTCAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGTCAGTGCAGGGGATTGTTCTTAGGCTTCTTCAATTTGTATGTATGTATGTGTCATGTaCAAGGATCTTTTTTCCTCTCTTTTTATTTATTGCATAGGGATCTGTGTTGTCCTTGTTATTATACTTTTGGTTAACATGCACTTCAAAAGAACGGTTTTTGTTTGAATGGTATGAATGTTATCAATCATaTACCTGATCCATGATCTTAAATGATTTTCATTTTCATGTTTACAATTGAGCATTTTTATTTTGAATCACGAAGGTAGCCAATGATAGTCTTTACTTTCTCTTTGTAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTAGATAGTTATTCCCCTTTTATCCAACTTTGATTTGCTGATTGGTTTTGAGCTTCAGGGAATTATAGTTCACGATCTTTTTTCTCTAGGTCCACCTGGTGCtAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTGAGCACAGTTATAATACCTTTAATGAGGGGTTGAAAATTTTTCTTGCTATTTTACACCTGCAACTTTTTGCAAAATCAAATGTTGAAGATGAAAGTGcTTTCTGTATTTTGGTATGTGTAGATGTCTAACCGTTGTTTCCTCTACAGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTTAACGTTATCGAAGGCAGCAAATTTGCTACCACTTGCTGACACTGGGGGGGCCTAAATGCATGACAATCATTCCATTATCAGATATCTTAGGGTGGATTAGGgACTTTCTATGTTAAAAATTCATTACTCCATCCTGCCTGTGATTGCATCAGATCAAATCAAAGATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATTTCTTGATTCTTT

mRNA sequence

TCAATGAACCATACCTCTGATAAAATAAATGCCTTTCAATTTTTCCGTGAAATCTGTAATTAAACATTGTTCTTGTCAATGTGTGTAGTAATACCCTTCATTCTCTCTTCAATCCAGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTTAACGTTATCGAAGGCAGCAAATTTGCTACCACTTGCTGACACTGGGGGGGCCTAAATGCATGACAATCATTCCATTATCAGATATCTTAGGGTGGATTAGGGACTTTCTATGTTAAAAATTCATTACTCCATCCTGCCTGTGATTGCATCAGATCAAATCAAAGATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATTTCTTGATTCTTT

Coding sequence (CDS)

ATGtGTGTAGTAATACCCTTCATTCTCTCTTCAATCCAGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTAtGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCtAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA

Protein sequence

MCVVIPFILSSIQASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY*

Homology

[Close]

BLAST of Cucsa.084710.2 vs. Swiss-Prot
Match: BRN1L_ARATH (RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.9e-123
Identity = 234/352 (66.48%), Postives = 276/352 (78.41%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           A+S LQVKYADGELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKG
Sbjct: 88  ANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKG 147

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS    + N
Sbjct: 148 CAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGN 207

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG-- 193
            D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  
Sbjct: 208 GDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSNMIAQPNQGNN 267

Query: 194 NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGP 253
           NA++G  PD + P +A RN+ MPP +Y  S YP +     P AYP G++SP  +SSS  P
Sbjct: 268 NALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSS--P 327

Query: 254 GPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVF 313
           G  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD+ELA +F++FG VLSAKVF
Sbjct: 328 GSISPGMSTPL-GIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVF 387

Query: 314 VDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP 360
           VDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Sbjct: 388 VDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQP 433

[Close]

BLAST of Cucsa.084710.2 vs. Swiss-Prot
Match: BRN2L_ARATH (RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.7e-114
Identity = 218/352 (61.93%), Postives = 262/352 (74.43%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKG
Sbjct: 82  ASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYGTIKDLQILRGSLQTSKG 141

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           C FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   +V  
Sbjct: 142 CLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKERQARRLLKVQS---HVSR 201

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNA 193
            D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A
Sbjct: 202 LDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQTQHAFHNVISPNQGNGRA 261

Query: 194 MRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPG 253
           ++G      +PP L P    RN+     +Y    G   LQ+PMA+P GM+ P +  ++  
Sbjct: 262 LQGTALTESVPPRLAP---RRNFPTALGNY----GYHGLQYPMAFPRGMIPPRLPLTTVS 321

Query: 254 PGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKV 313
           PG    G + P+S        Q EGP GANLFIY+IP+EF D+ELA +F+ FG+VLSAKV
Sbjct: 322 PGISNNGTSIPSSL-------QTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKV 381

Query: 314 FVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSK 359
           FVDK +G+SKCFGF+SYDS  AAQ+AI+TMNGCQL GKKLKVQLKRDN Q +
Sbjct: 382 FVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQLKRDNGQQQ 413

[Close]

BLAST of Cucsa.084710.2 vs. Swiss-Prot
Match: CELF5_XENTR (CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.4e-54
Identity = 140/383 (36.55%), Postives = 196/383 (51.17%), Query Frame = 1


Query: 17  PLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAF 76
           P+QVK AD E    + KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF
Sbjct: 120 PIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAF 179

Query: 77  LKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK---------------- 136
           +K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+                
Sbjct: 180 VKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLA 239

Query: 137 ---------AQKAQSQATNVLNADSQH---PSL-FGAMPLGYVPPYNGYGYQAPGSYGLM 196
                    AQ    Q T VL+        PS+ F +  +  +   N  G  A       
Sbjct: 240 LPISPYSAYAQALMQQQTTVLSTSHGSYLSPSVAFPSCHIQQIGAVNLNGLPAAPITPAS 299

Query: 197 QYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAT--RNYAMPPASYSAYPGVPAL 256
             H PP+   +  P ++  L  G       P   P + T   N  +P  + S    V +L
Sbjct: 300 GLHSPPVIGTAAVPGLVAPLTNGFPGLVPFPSSHPALDTIYTNSIVPYPAQSPALTVESL 359

Query: 257 --------QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANL 316
                   Q+   YP   ++P V  S+P P P                  Q EGP G NL
Sbjct: 360 HPSFTGVQQYSAIYPTAALTP-VTHSTPQPPPILQ---------------QREGPEGCNL 419

Query: 317 FIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMN 361
           FIYH+PQEFGD EL   F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MN
Sbjct: 420 FIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAMN 479

HSP 2 Score: 66.2 bits (160), Expect = 8.2e-10
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQ-TSKGCAFLKYETKDQAVAALEA 92
           KLF+G +P+N+ E ++  LF Q+G I +L +L+       KGCAFL Y  +D A+ A  A
Sbjct: 48  KLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTA 107

Query: 93  INGKCKMEGSSVPLVVKWADTEKERQARK-------AQKAQSQATNVLNA 135
           ++ +  + G + P+ VK AD+E     RK        Q+++ + T++  A
Sbjct: 108 LHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQA 157

[Close]

BLAST of Cucsa.084710.2 vs. Swiss-Prot
Match: CELF5_HUMAN (CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-51
Identity = 141/386 (36.53%), Postives = 194/386 (50.26%), Query Frame = 1


Query: 17  PLQVKYADGELER-LEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCA 76
           P+QVK AD E     + KLF+GML K  SE++V  LF  +G I +  +LRG   +SKGCA
Sbjct: 118 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 177

Query: 77  FLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK--------------- 136
           F+K+ +  +A AA+ A++G   M G+S  LVVK+ADT+KER  R+               
Sbjct: 178 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPSL 237

Query: 137 ----------AQKAQSQATNVLNADSQHPS---LFGAMPLGYVPPYNGYGYQAPGSYGLM 196
                     AQ    Q T VL+    + S    F    +  +   +  G  A       
Sbjct: 238 TLPFSPYSAYAQALMQQQTTVLSTSGSYLSPGVAFSPCHIQQIGAVSLNGLPATPIAPAS 297

Query: 197 QYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYAMP-PAS------- 256
             H PP+   +  P ++  +  G A  G+ P  G  P + T   N  +P PA        
Sbjct: 298 GLHSPPLLGTTAVPGLVAPITNGFA--GVVPFPGGHPALETVYANGLVPYPAQSPTVAET 357

Query: 257 -YSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPG 316
            + A+ GV   Q+   YP   ++P +  S P P P    +             Q EGP G
Sbjct: 358 LHPAFSGVQ--QYTAMYPTAAITP-IAHSVPQPPPLLQQQ-------------QREGPEG 417

Query: 317 ANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS 361
            NLFIYH+PQEFGD EL   F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI 
Sbjct: 418 CNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQ 477

HSP 2 Score: 61.6 bits (148), Expect = 2.0e-08
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQ-TSKGCAFLKYETKDQAVAALEA 92
           KLF+G +P+++ E ++  LF Q+G I +L +L+       KGCAFL Y  +D A+ A  A
Sbjct: 46  KLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTA 105

Query: 93  INGKCKMEGSSVPLVVKWADTE 114
           ++ +  + G + P+ VK AD+E
Sbjct: 106 LHEQKTLPGMARPIQVKPADSE 127

[Close]

BLAST of Cucsa.084710.2 vs. Swiss-Prot
Match: CELF3_DANRE (CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 3.3e-51
Identity = 139/379 (36.68%), Postives = 199/379 (52.51%), Query Frame = 1


Query: 17  PLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAF 76
           P+QVK AD E  R + KLF+GML K +S+ +V  +F  +G+I++  +LRG    SKGCAF
Sbjct: 80  PIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAF 139

Query: 77  LKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADS 136
           +KY++  +A AA+ A++G   + G+S  LVVK+ADTEKER  R+ Q+  SQ   V++  S
Sbjct: 140 VKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRMQQVASQ-LGVISPMS 199

Query: 137 QHPSLFGAMPLGYVP-----PYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGN 196
            H   + A     V        + Y         +    L  +   S     I  +   +
Sbjct: 200 LHLGAYNAYTQALVQQQALVAQSAYLSPVATVAAVQMQQLAALNPSSIIATPIASITPSS 259

Query: 197 AMRGIPPDLGPGMATRNYAM-PPASYSAYPGVPALQHPMAYPGGMMSPGV---VSSSPGP 256
                PP +    AT   A+ PP + ++YP VPA  +  +    + + GV    + SP  
Sbjct: 260 G-TSTPPTIA---ATPVPALPPPIAVNSYPPVPAAPNGQSASEALYTNGVHPYQAQSPAL 319

Query: 257 GP----FTGGKN-SPTSSMGKGSGG---------------------QIEGPPGANLFIYH 316
            P    +TG ++ + T     G  G                     Q EGP G N+FIYH
Sbjct: 320 DPLQQAYTGMQHYTATYPAAYGLVGQPFPHQPTLVAQQPQQPQQLQQREGPEGCNIFIYH 379

Query: 317 IPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQL 361
           +PQEF D E+   F  FG V+SAKVFVD+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+
Sbjct: 380 LPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI 439

HSP 2 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQ-TSKGCAFLKYETKDQAVAALEA 92
           KLFIG +P+N+ E ++  +F Q+G I +L +++       KGCAFL Y  ++ A+ A  A
Sbjct: 8   KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67

Query: 93  INGKCKMEGSSVPLVVKWADTE 114
           ++ +  + G + P+ VK AD+E
Sbjct: 68  LHEQKTLPGMNRPIQVKPADSE 89

[Close]

BLAST of Cucsa.084710.2 vs. TrEMBL
Match: A0A0A0K5R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 4.6e-201
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG
Sbjct: 92  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 151

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN
Sbjct: 152 CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 211

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM
Sbjct: 212 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 271

Query: 194 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 253
           RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG
Sbjct: 272 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 331

Query: 254 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 313
           KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG
Sbjct: 332 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 391

Query: 314 VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
Sbjct: 392 VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 438

[Close]

BLAST of Cucsa.084710.2 vs. TrEMBL
Match: A0A0A0K5R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1)

HSP 1 Score: 32.0 bits (71), Expect = 1.9e+03
Identity = 22/83 (26.51%), Postives = 36/83 (43.37%), Query Frame = 1


Query: 270 EGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAA 329
           E      LF+  +P+   + +L   F+ F  V    +  DKT+  S+   FV   S + A
Sbjct: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76

Query: 330 QSAISTM-NGCQLGGKKLKVQLK 352
             A++   N   L G    +Q+K
Sbjct: 77  DKAVNACHNKKTLPGASSPLQVK 99

HSP 2 Score: 567.4 bits (1461), Expect = 1.3e-158
Identity = 281/351 (80.06%), Postives = 310/351 (88.32%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS LFS+YGTIKDLQILRGSQQTSKG
Sbjct: 86  ASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSALFSKYGTIKDLQILRGSQQTSKG 145

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+ ALEAINGK KMEGS+VPLVVKWADTEKERQAR+AQKAQSQA+N+ N
Sbjct: 146 CAFLKYETKEQALDALEAINGKHKMEGSNVPLVVKWADTEKERQARRAQKAQSQASNISN 205

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADS HPSLFGA+P+GY  P+NGYGYQAPGSYGLMQY LPPMQNQ  F NMIP +NQG+AM
Sbjct: 206 ADSPHPSLFGALPMGYAAPFNGYGYQAPGSYGLMQYRLPPMQNQPAFHNMIPPVNQGSAM 265

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPG--PGP 253
           RGI PDL P +A RNY MPPASY  SAYP VP +Q+PMAYPGG+MS   ++SSPG  P  
Sbjct: 266 RGITPDLAPNIAPRNYVMPPASYVGSAYPAVPGIQYPMAYPGGIMSHRPLTSSPGSVPPA 325

Query: 254 FTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
            T   +S +SS+G  SGGQIEGPPGANLFIYHIPQEFGD+ELAN+F+ FGRVLSAKVFVD
Sbjct: 326 NTTSNSSSSSSVGTSSGGQIEGPPGANLFIYHIPQEFGDQELANAFQGFGRVLSAKVFVD 385

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 386 KATGVSKCFGFVSYDSPAAAQNAINVMNGCQLGGKKLKVQLKRDNKQNKPY 436

[Close]

BLAST of Cucsa.084710.2 vs. TrEMBL
Match: A0A061DQ15_THECC (RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515 PE=4 SV=1)

HSP 1 Score: 32.0 bits (71), Expect = 1.9e+03
Identity = 21/76 (27.63%), Postives = 35/76 (46.05%), Query Frame = 1


Query: 277 LFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTM 336
           LF+  +P+   + +L   F+ F  V    +  DKT+  S+   FV   S + A  A++  
Sbjct: 18  LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 77

Query: 337 -NGCQLGGKKLKVQLK 352
            N   L G    +Q+K
Sbjct: 78  HNKKTLPGASSPLQVK 93

HSP 2 Score: 565.1 bits (1455), Expect = 6.2e-158
Identity = 281/351 (80.06%), Postives = 308/351 (87.75%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           AS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS LFS+YGTIKDLQILRGSQQTSKG
Sbjct: 87  ASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSALFSKYGTIKDLQILRGSQQTSKG 146

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+A+LEAINGK KMEGSSVPLVVKWADTEKERQARKAQKAQSQ +N+ N
Sbjct: 147 CAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQVSNLPN 206

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           +D+QHPSLFGA+P+GYVPPYNGYGYQ PG+YGLMQY L PMQNQ GF NMIP +NQGNA+
Sbjct: 207 SDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRLSPMQNQPGFHNMIPPINQGNAL 266

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGP-GPF 253
           RGI PDL P M  RNY MPP ++  SAYPG+P LQHPMAYPGGMMS   +S SPG   P 
Sbjct: 267 RGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPMAYPGGMMSHRPLSGSPGSMPPA 326

Query: 254 TGGKNSPTS-SMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
               NS TS    KGSGGQ+EGPPGANLFIYHIPQEFGD++LAN+F+ FGRVLSAKVFVD
Sbjct: 327 VMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFGDQDLANAFQPFGRVLSAKVFVD 386

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 387 KATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLKVQLKRDNKQNKPY 437

[Close]

BLAST of Cucsa.084710.2 vs. TrEMBL
Match: W9SZM7_9ROSA (CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-07
Identity = 30/89 (33.71%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGS-QQTSKGCAFLKYETKDQAVAALEA 92
           KLF+G +PKN++E ++  +F ++  + ++ I++    + S+GC F+   ++ +A  A+ A
Sbjct: 18  KLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVICPSRQEADKAVNA 77

Query: 93  INGKCKMEGSSVPLVVKWADTEKERQARK 121
            + K  + G+S PL VK+AD E ER   K
Sbjct: 78  CHNKKTLPGASTPLQVKYADGELERLEHK 106

HSP 2 Score: 564.7 bits (1454), Expect = 8.1e-158
Identity = 277/351 (78.92%), Postives = 309/351 (88.03%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSEDEVS LFS+YGT+KDLQILRGSQQTSKG
Sbjct: 27  ASSPLQVKYADGELERLEHKLFVGMLPKNVSEDEVSALFSKYGTLKDLQILRGSQQTSKG 86

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+AALEAINGK KMEGSSVPLVVKWADTEKERQAR+AQKAQSQA+N+ N
Sbjct: 87  CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQASNMPN 146

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADS HPSLFGA+P+GYVPPYNGYGYQAPGSYGLMQY LPPMQNQ  F NMIP +NQG+++
Sbjct: 147 ADSPHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQYRLPPMQNQPAFNNMIPHVNQGSSL 206

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPG--PGP 253
           RGI PDL P +A RNY +PP SY  SAYP VP LQ+PMAYPGG+M+  +++ SPG  P  
Sbjct: 207 RGITPDLAPNIAPRNYPVPPTSYVGSAYPAVPGLQYPMAYPGGIMNHRLLTGSPGSVPQA 266

Query: 254 FTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
                +S +S +G  SGG IEGPPGANLFIYHIPQEFGD+ELAN+F+ FGRVLS KVFVD
Sbjct: 267 NINSNSSSSSPVGTNSGGHIEGPPGANLFIYHIPQEFGDQELANAFQGFGRVLSTKVFVD 326

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 327 KATGVSKCFGFVSYDSPAAAQNAINMMNGCQLGGKKLKVQLKRDNKQNKPY 377

[Close]

BLAST of Cucsa.084710.2 vs. TrEMBL
Match: A0A0D2R6M7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 8.1e-158
Identity = 277/351 (78.92%), Postives = 309/351 (88.03%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSEDEVS LFS+YGT+KDLQILRGSQQTSKG
Sbjct: 86  ASSPLQVKYADGELERLEHKLFVGMLPKNVSEDEVSALFSKYGTLKDLQILRGSQQTSKG 145

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+AALEAINGK KMEGSSVPLVVKWADTEKERQAR+AQKAQSQA+N+ N
Sbjct: 146 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQASNMPN 205

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADS HPSLFGA+P+GYVPPYNGYGYQAPGSYGLMQY LPPMQNQ  F NMIP +NQG+++
Sbjct: 206 ADSPHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQYRLPPMQNQPAFNNMIPHVNQGSSL 265

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPG--PGP 253
           RGI PDL P +A RNY +PP SY  SAYP VP LQ+PMAYPGG+M+  +++ SPG  P  
Sbjct: 266 RGITPDLAPNIAPRNYPVPPTSYVGSAYPAVPGLQYPMAYPGGIMNHRLLTGSPGSVPQA 325

Query: 254 FTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
                +S +S +G  SGG IEGPPGANLFIYHIPQEFGD+ELAN+F+ FGRVLS KVFVD
Sbjct: 326 NINSNSSSSSPVGTNSGGHIEGPPGANLFIYHIPQEFGDQELANAFQGFGRVLSTKVFVD 385

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 386 KATGVSKCFGFVSYDSPAAAQNAINMMNGCQLGGKKLKVQLKRDNKQNKPY 436

[Close]

BLAST of Cucsa.084710.2 vs. TAIR10
Match: AT4G03110.1 (AT4G03110.1 RNA-binding protein-defense related 1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-124
Identity = 234/352 (66.48%), Postives = 276/352 (78.41%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           A+S LQVKYADGELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKG
Sbjct: 88  ANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQILRGAQQTSKG 147

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS    + N
Sbjct: 148 CAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQKAQSHIARLGN 207

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG-- 193
            D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  
Sbjct: 208 GDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSNMIAQPNQGNN 267

Query: 194 NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGP 253
           NA++G  PD + P +A RN+ MPP +Y  S YP +     P AYP G++SP  +SSS  P
Sbjct: 268 NALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSPRPLSSS--P 327

Query: 254 GPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVF 313
           G  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD+ELA +F++FG VLSAKVF
Sbjct: 328 GSISPGMSTPL-GIGLSSVVQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVF 387

Query: 314 VDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP 360
           VDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Sbjct: 388 VDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQP 433

[Close]

BLAST of Cucsa.084710.2 vs. TAIR10
Match: AT1G03457.2 (AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 405.6 bits (1041), Expect = 3.2e-113
Identity = 218/361 (60.39%), Postives = 262/361 (72.58%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQIL 73
           ASSPLQVKYADGELERL         EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQIL
Sbjct: 82  ASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQSLFSEYGTIKDLQIL 141

Query: 74  RGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA 133
           RGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K 
Sbjct: 142 RGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKERQARRLLKV 201

Query: 134 QSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI 193
           QS   +V   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I
Sbjct: 202 QS---HVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQTQHAFHNVI 261

Query: 194 -PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMS 253
            P    G A++G      +PP L P    RN+     +Y    G   LQ+PMA+P GM+ 
Sbjct: 262 SPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY----GYHGLQYPMAFPRGMIP 321

Query: 254 PGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRA 313
           P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D+ELA +F+ 
Sbjct: 322 PRLPLTTVSPGISNNGTSIPSSL-------QTEGPAGANLFIYNIPREFEDQELAATFQP 381

Query: 314 FGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQS 359
           FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI+TMNGCQL GKKLKVQLKRDN Q 
Sbjct: 382 FGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQLKRDNGQQ 422

[Close]

BLAST of Cucsa.084710.2 vs. TAIR10
Match: AT4G16280.2 (AT4G16280.2 RNA binding;abscisic acid binding)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21
Identity = 73/229 (31.88%), Postives = 114/229 (49.78%), Query Frame = 1


Query: 15  SSPLQVKYADGELER---LEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTS 74
           + P+QV+YADGE ER   LE KLF+G L K  +E EV  +F Q+G ++D+ ++R   + S
Sbjct: 191 TGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQS 250

Query: 75  KGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNV 134
           +GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ +     + A       
Sbjct: 251 RGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPKPGESREMAP------ 310

Query: 135 LNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLN 194
                        + LG  P +   G +   ++G       H  P +  +   N+ P  N
Sbjct: 311 ------------PVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATS-RNVGPPSN 370

Query: 195 QGNAMRGIPPDLG--PGMAT--RNYAMPPASYSAYPGVPALQHPMAYPG 234
            G  +RG   D    PG AT   N   P   Y    GVP L +P+  PG
Sbjct: 371 TG--IRGAGSDFSPKPGQATLPSNQGGPLGGY----GVPPL-NPLPVPG 393

HSP 2 Score: 63.9 bits (154), Expect = 2.3e-10
Identity = 62/253 (24.51%), Postives = 103/253 (40.71%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQ-TSKGCAFLKYETKDQAVAALEA 92
           KLF+G +P+  +E+E+   F Q+G + ++ +++  +    +GC F+KY T   A  A+ A
Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180

Query: 93  INGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVP 152
           ++ +  + G + P+ V++AD E+ER      K    + N    + +   +F  +  G+V 
Sbjct: 181 LHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF--LQFGHVE 240

Query: 153 P--YNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY 212
                   Y+     G ++Y      ++      I  LN    MRG    L    A    
Sbjct: 241 DVYLMRDEYRQSRGCGFVKY-----SSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKR 300

Query: 213 AMPPASYSAYPGVPALQHPMAYPGGMM-------SPGVVSSSPGPGPFTGGKNSPTSSMG 272
             P  S    P V     P     G         S G VS +    P T     P S+ G
Sbjct: 301 PKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSNTG 360

Query: 273 -KGSGGQIEGPPG 275
            +G+G      PG
Sbjct: 361 IRGAGSDFSPKPG 366

[Close]

BLAST of Cucsa.084710.2 vs. TAIR10
Match: AT2G47310.1 (AT2G47310.1 flowering time control protein-related / FCA gamma-related)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-14
Identity = 49/181 (27.07%), Postives = 91/181 (50.28%), Query Frame = 1


Query: 17  PLQVKYADGELERL---------EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGS 76
           P++V++A+ E ER+           KL++  L K  ++ EV+ +FS+YG I+D+ +    
Sbjct: 183 PVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDD 242

Query: 77  QQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQ 136
            +  +G AF+++  K+ A+AA++A+NG   + GS  PL+V++AD +K R   +     + 
Sbjct: 243 MKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFADPKKPRLGEQRSTFNTP 302

Query: 137 ATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQL 189
                      P++    P  +  PY  +  + P    ++Q+H     + S  PN  P  
Sbjct: 303 -----------PAMQHFDPNWHSQPYPQWENKEPAPPRVVQHH-----DFSSQPNHFPHQ 347

[Close]

BLAST of Cucsa.084710.2 vs. TAIR10
Match: AT3G53460.4 (AT3G53460.4 chloroplast RNA-binding protein 29)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 1


Query: 252 GGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKT 311
           G   S  SS G GSG       G  L++ ++     D  L N F   G+V+ A+V  D+ 
Sbjct: 255 GYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRD 314

Query: 312 SGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKV 349
           SG SK FGFV+  S++  Q AI+++NG  L G++++V
Sbjct: 315 SGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRV 351

HSP 2 Score: 40.8 bits (94), Expect = 2.1e-03
Identity = 21/66 (31.82%), Postives = 33/66 (50.00%), Query Frame = 1


Query: 273 PGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSA 332
           P   LF+ ++       +LA  F + G V   +V  DK +G S+ FGFV+  +A   ++A
Sbjct: 97  PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156

Query: 333 ISTMNG 339
               NG
Sbjct: 157 AQQFNG 162

[Close]

BLAST of Cucsa.084710.2 vs. NCBI nr
Match: gi|449462310|ref|XP_004148884.1| (PREDICTED: RNA-binding protein BRN1 [Cucumis sativus])

HSP 1 Score: 708.4 bits (1827), Expect = 6.5e-201
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG
Sbjct: 92  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 151

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN
Sbjct: 152 CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 211

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM
Sbjct: 212 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 271

Query: 194 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 253
           RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG
Sbjct: 272 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 331

Query: 254 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 313
           KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG
Sbjct: 332 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 391

Query: 314 VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
Sbjct: 392 VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 438

[Close]

BLAST of Cucsa.084710.2 vs. NCBI nr
Match: gi|449462310|ref|XP_004148884.1| (PREDICTED: RNA-binding protein BRN1 [Cucumis sativus])

HSP 1 Score: 32.0 bits (71), Expect = 2.7e+03
Identity = 22/83 (26.51%), Postives = 36/83 (43.37%), Query Frame = 1


Query: 270 EGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAA 329
           E      LF+  +P+   + +L   F+ F  V    +  DKT+  S+   FV   S + A
Sbjct: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76

Query: 330 QSAISTM-NGCQLGGKKLKVQLK 352
             A++   N   L G    +Q+K
Sbjct: 77  DKAVNACHNKKTLPGASSPLQVK 99

HSP 2 Score: 706.1 bits (1821), Expect = 3.2e-200
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG
Sbjct: 92  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 151

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN
Sbjct: 152 CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 211

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM
Sbjct: 212 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 271

Query: 194 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 253
           RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG
Sbjct: 272 RGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG 331

Query: 254 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 313
           KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG
Sbjct: 332 KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSG 391

Query: 314 VSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           VSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Sbjct: 392 VSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY 438

[Close]

BLAST of Cucsa.084710.2 vs. NCBI nr
Match: gi|659101095|ref|XP_008451423.1| (PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo])

HSP 1 Score: 32.0 bits (71), Expect = 2.7e+03
Identity = 22/83 (26.51%), Postives = 36/83 (43.37%), Query Frame = 1


Query: 270 EGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAA 329
           E      LF+  +P+   + +L   F+ F  V    +  DKT+  S+   FV   S + A
Sbjct: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76

Query: 330 QSAISTM-NGCQLGGKKLKVQLK 352
             A++   N   L G    +Q+K
Sbjct: 77  DKAVNACHNKKTLPGASSPLQVK 99

HSP 2 Score: 567.4 bits (1461), Expect = 1.8e-158
Identity = 281/351 (80.06%), Postives = 310/351 (88.32%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS LFS+YGTIKDLQILRGSQQTSKG
Sbjct: 86  ASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSALFSKYGTIKDLQILRGSQQTSKG 145

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+ ALEAINGK KMEGS+VPLVVKWADTEKERQAR+AQKAQSQA+N+ N
Sbjct: 146 CAFLKYETKEQALDALEAINGKHKMEGSNVPLVVKWADTEKERQARRAQKAQSQASNISN 205

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADS HPSLFGA+P+GY  P+NGYGYQAPGSYGLMQY LPPMQNQ  F NMIP +NQG+AM
Sbjct: 206 ADSPHPSLFGALPMGYAAPFNGYGYQAPGSYGLMQYRLPPMQNQPAFHNMIPPVNQGSAM 265

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPG--PGP 253
           RGI PDL P +A RNY MPPASY  SAYP VP +Q+PMAYPGG+MS   ++SSPG  P  
Sbjct: 266 RGITPDLAPNIAPRNYVMPPASYVGSAYPAVPGIQYPMAYPGGIMSHRPLTSSPGSVPPA 325

Query: 254 FTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
            T   +S +SS+G  SGGQIEGPPGANLFIYHIPQEFGD+ELAN+F+ FGRVLSAKVFVD
Sbjct: 326 NTTSNSSSSSSVGTSSGGQIEGPPGANLFIYHIPQEFGDQELANAFQGFGRVLSAKVFVD 385

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 386 KATGVSKCFGFVSYDSPAAAQNAINVMNGCQLGGKKLKVQLKRDNKQNKPY 436

[Close]

BLAST of Cucsa.084710.2 vs. NCBI nr
Match: gi|590718175|ref|XP_007050757.1| (RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao])

HSP 1 Score: 32.0 bits (71), Expect = 2.7e+03
Identity = 21/76 (27.63%), Postives = 35/76 (46.05%), Query Frame = 1


Query: 277 LFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTM 336
           LF+  +P+   + +L   F+ F  V    +  DKT+  S+   FV   S + A  A++  
Sbjct: 18  LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 77

Query: 337 -NGCQLGGKKLKVQLK 352
            N   L G    +Q+K
Sbjct: 78  HNKKTLPGASSPLQVK 93

HSP 2 Score: 565.1 bits (1455), Expect = 8.9e-158
Identity = 281/351 (80.06%), Postives = 308/351 (87.75%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           AS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS LFS+YGTIKDLQILRGSQQTSKG
Sbjct: 87  ASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSALFSKYGTIKDLQILRGSQQTSKG 146

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+A+LEAINGK KMEGSSVPLVVKWADTEKERQARKAQKAQSQ +N+ N
Sbjct: 147 CAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQVSNLPN 206

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           +D+QHPSLFGA+P+GYVPPYNGYGYQ PG+YGLMQY L PMQNQ GF NMIP +NQGNA+
Sbjct: 207 SDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRLSPMQNQPGFHNMIPPINQGNAL 266

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGP-GPF 253
           RGI PDL P M  RNY MPP ++  SAYPG+P LQHPMAYPGGMMS   +S SPG   P 
Sbjct: 267 RGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPMAYPGGMMSHRPLSGSPGSMPPA 326

Query: 254 TGGKNSPTS-SMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
               NS TS    KGSGGQ+EGPPGANLFIYHIPQEFGD++LAN+F+ FGRVLSAKVFVD
Sbjct: 327 VMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFGDQDLANAFQPFGRVLSAKVFVD 386

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 387 KATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLKVQLKRDNKQNKPY 437

[Close]

BLAST of Cucsa.084710.2 vs. NCBI nr
Match: gi|703161142|ref|XP_010112715.1| (CUGBP Elav-like family member 5 [Morus notabilis])

HSP 1 Score: 63.5 bits (153), Expect = 8.5e-07
Identity = 30/89 (33.71%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 33  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGS-QQTSKGCAFLKYETKDQAVAALEA 92
           KLF+G +PKN++E ++  +F ++  + ++ I++    + S+GC F+   ++ +A  A+ A
Sbjct: 18  KLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVICPSRQEADKAVNA 77

Query: 93  INGKCKMEGSSVPLVVKWADTEKERQARK 121
            + K  + G+S PL VK+AD E ER   K
Sbjct: 78  CHNKKTLPGASTPLQVKYADGELERLEHK 106

HSP 2 Score: 564.7 bits (1454), Expect = 1.2e-157
Identity = 277/351 (78.92%), Postives = 309/351 (88.03%), Query Frame = 1


Query: 14  ASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKG 73
           ASSPLQVKYADGELERLEHKLF+GMLPKNVSEDEVS LFS+YGT+KDLQILRGSQQTSKG
Sbjct: 75  ASSPLQVKYADGELERLEHKLFVGMLPKNVSEDEVSALFSKYGTLKDLQILRGSQQTSKG 134

Query: 74  CAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLN 133
           CAFLKYETK+QA+AALEAINGK KMEGSSVPLVVKWADTEKERQAR+AQKAQSQA+N+ N
Sbjct: 135 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQASNMPN 194

Query: 134 ADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAM 193
           ADS HPSLFGA+P+GYVPPYNGYGYQAPGSYGLMQY LPPMQNQ  F NMIP +NQG+++
Sbjct: 195 ADSPHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQYRLPPMQNQPAFNNMIPHVNQGSSL 254

Query: 194 RGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPG--PGP 253
           RGI PDL P +A RNY +PP SY  SAYP VP LQ+PMAYPGG+M+  +++ SPG  P  
Sbjct: 255 RGITPDLAPNIAPRNYPVPPTSYVGSAYPAVPGLQYPMAYPGGIMNHRLLTGSPGSVPQA 314

Query: 254 FTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVD 313
                +S +S +G  SGG IEGPPGANLFIYHIPQEFGD+ELAN+F+ FGRVLS KVFVD
Sbjct: 315 NINSNSSSSSPVGTNSGGHIEGPPGANLFIYHIPQEFGDQELANAFQGFGRVLSTKVFVD 374

Query: 314 KTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 361
           K +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 375 KATGVSKCFGFVSYDSPAAAQNAINMMNGCQLGGKKLKVQLKRDNKQNKPY 425

The following BLAST results are available for this feature:

BLAST of Cucsa.084710.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BRN1L_ARATH	1.9e-123	66.48	RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1	[more]
BRN2L_ARATH	2.7e-114	61.93	RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1	[more]
CELF5_XENTR	2.4e-54	36.55	CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1	[more]
CELF5_HUMAN	1.1e-51	36.53	CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1	[more]
CELF3_DANRE	3.3e-51	36.68	CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2	[more]

BLAST of Cucsa.084710.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5R5_CUCSA	4.6e-201	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1	[more]
A0A0A0K5R5_CUCSA	1.9e+03	26.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1	[more]
A0A061DQ15_THECC	1.9e+03	27.63	RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515...	[more]
W9SZM7_9ROSA	5.9e-07	33.71	CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1	[more]
A0A0D2R6M7_GOSRA	8.1e-158	78.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1	[more]

BLAST of Cucsa.084710.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03110.1	1.1e-124	66.48	RNA-binding protein-defense related 1	[more]
AT1G03457.2	3.2e-113	60.39	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G16280.2	1.7e-21	31.88	RNA binding;abscisic acid binding	[more]
AT2G47310.1	5.8e-14	27.07	flowering time control protein-related / FCA gamma-related	[more]
AT3G53460.4	2.7e-11	37.11	chloroplast RNA-binding protein 29	[more]

BLAST of Cucsa.084710.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462310\|ref\|XP_004148884.1\|	6.5e-201	100.00	PREDICTED: RNA-binding protein BRN1 [Cucumis sativus]	[more]
gi\|449462310\|ref\|XP_004148884.1\|	2.7e+03	26.51	PREDICTED: RNA-binding protein BRN1 [Cucumis sativus]	[more]
gi\|659101095\|ref\|XP_008451423.1\|	2.7e+03	26.51	PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo]	[more]
gi\|590718175\|ref\|XP_007050757.1\|	2.7e+03	27.63	RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao]	[more]
gi\|703161142\|ref\|XP_010112715.1\|	8.5e-07	33.71	CUGBP Elav-like family member 5 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR002343	Hud_Sxl_RNA
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.084710	Cucsa.084710	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.084710.2	Cucsa.084710.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.084710.2.five_prime_UTR.1	Cucsa.084710.2.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.084710.2.CDS.1	Cucsa.084710.2.CDS.1	CDS
Cucsa.084710.2.CDS.2	Cucsa.084710.2.CDS.2	CDS
Cucsa.084710.2.CDS.3	Cucsa.084710.2.CDS.3	CDS
Cucsa.084710.2.CDS.4	Cucsa.084710.2.CDS.4	CDS
Cucsa.084710.2.CDS.5	Cucsa.084710.2.CDS.5	CDS
Cucsa.084710.2.CDS.6	Cucsa.084710.2.CDS.6	CDS
Cucsa.084710.2.CDS.7	Cucsa.084710.2.CDS.7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.084710.2.three_prime_UTR.1	Cucsa.084710.2.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 34..96 score: 9.5E-17coord: 277..347 score: 2.1
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 276..349 score: 6.6E-21coord: 33..108 score: 5.4
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 275..353 score: 16.79coord: 32..112 score: 16
IPR002343	Paraneoplastic encephalomyelitis antigen	PRINTS	PR00961	HUDSXLRNA	coord: 52..64 score: 7.2E-5coord: 37..52 score: 7.2E-5coord: 93..110 score: 7.
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 15..111 score: 1.3E-20coord: 112..126 score: 1.5E-25coord: 271..358 score: 1.5
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 272..355 score: 4.14E-42coord: 32..122 score: 4.14
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 216..232 score: 2.5E-133coord: 271..357 score: 2.5E-133coord: 16..168 score: 2.5E
None	No IPR available	PANTHER	PTHR24012:SF414	SUBFAMILY NOT NAMED	coord: 271..357 score: 2.5E-133coord: 216..232 score: 2.5E-133coord: 16..168 score: 2.5E