Cucsa.084710 (gene) Cucumber (Gy14) v1

NameCucsa.084710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCUGBP Elav-like family member 5
Locationscaffold00862 : 380338 .. 384949 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAGAAAAATCCAATCTCAGAGAGAGAAGTTGACGGCGAAATCTAGAGAGAGAAAGCTTCAAACCGGCATTAATGGCGGAAGGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCAACTTCTCACAATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCCAGAGGTTTTTtTTtTTTTttTttttACATTTACACTCGCCTTCTCTCTGTTTATCTTTCGTTATGTTCGTTTGTGATGATTTCTGGTTTGATTCAATTTGAGTAGAGTCTAATCATCGATTGACATTGTGAACTCATGTTTTGAACCCTAATCTTTGTTGTTaTTTGTTTTGGTTACTGCATTTTTCAGGTTGCTGTTTCGTGATTTGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGgggTTAGTGGAATCTGGATTTTTAAGTTGCGAATTGTTAATCATTTTTATTTCTCTCTGTCTCTCTCTTCTCAATGTTTTGTTTTGTTTTTtATGTCTTTTCTTTTTTtCTTGTCGATAATGCTAATCAATGCAATTGATCGATGCGATAGACTTGGCCTTGTGCGTAATTGCTGTTATCAATAACCTTGAAATTCTAAAACTCTTGGCTTTTCTGTAAAAGCTGCTTTCTAGTTTCAGACTACACCACATTGTGATACATCTTATATTTTGGACTTGAAAATGAACTAATTGAGCGCTCTACAACTCTAAGATTTCACTTCCCTTTATTTAAGGAAAAaTAATTATTGATTCTTTTCATTTTTTTtCTTTTACTATAATAGTTTTATTTAATTATGCTTTACGGAATCAAGCTCTTTAACTCTGAAAGATGTTATCCTTGTGATTTAGCATTGAATGCAAAGATaTGACTTTGTGATGAACAAAAGGAAAGGGgAGACCTTTtAaGAGAAATTATTTTTACTAAATTAAGCTAGATTTGCGCATCAATGAAGTGGGATCAACTTCTGATCCGAGCATTGATTttCTGATGTGATCGTTCTGCTTGTAACTGGCATGGTCTGCCATTGAGTGATAAAAGGCGTTTTGAAGAGACAAACAATGATGTATTCATTATGCGAGGAAGAGTATGGGTTTCCATCGAATCTATCGTTAATATCATCGATAACCATTTTcATGGTTAAAATTTGCCGAAATGATTAAAATTTTGGTGAGTTGGTTAGGAAATAATTGTAGAGTTGACTTTAGGCATTTCATGTGAAGTATATTTCTGATTCACTTTGGAGCTTCTTAATGTTTGTAAATTTATGGAATTATGGGCAATATTTAGGAAATAGTGGTAGAGTGGACTCAAATTATTTTATTTAATTTGTATGCTATTCTtGGAATTTATTTGATGAATCGTAGGTATTTTGAAGTATTAAGTCCATGCTTGCTGAGACATTCTTTTCTATTTTTCTCTTGCCCTTGCCATTGCACCGAACTGAATTTGATCTAATAATCTGTCCTAACGCTGCAATTGAATTTCGAAGGACCAAATCAGTACTCAAATATAGTTTATAGTCAATGAACCATACCTCTGATAAAATAAaTGCCTTTCAATTTTTCCGTGAAATCTGTAATTAAACATTGTTCTTGTCAATGtGTGTAGTAATACCCTTCATTCTCTCTTCAATCCAGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGGTGTAATATCATTCCcTGCTTGAATATCTCATCTAAAAGATGGTTCCTAACATCCATCAACCTACATTGCCACTTTCTTAACGATCTTGTATTTATCTTCCTGAAAGATTAATATTTAGTTTGTATGGATAGTAATGGTTGGTTATTTCTGAAAAGAGCAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTAtGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTAGTTTTTGGTTTGTTTCAGCTTGATTTAGTTGAAGTTGTGAAAGATATCACACATTCAGTTGAATCTTCACCATTAGCTCCATGTGTTGCTCATGTTCAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGTAATGGAATTTTCATGATATTTCCGGAAAAAGATAGGAGGTTAATACTAAAATCATTGAAATCATAGAAAGCCTATATATTGCTGAAAATCCATATTCACGTCGTTGATATTTTGTACCTTTGTGGGCACTTCTAATATTTCCCGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTtATCATTATTCAAGTCAAATTCAATGTACTCAATAGTTGAGTcTTCTTGCATAAGGCAACGTTATTTTAGGGCTGACATATTATGAAAATCCTAGCTTCCTGTAAGTAGGATAGTCTGTCTTAATACTCATATCTTTTACCCCGTTGAAAGTATGGAAGACTATGAATTTATACTTACAGACATAGGTTTACGGAGGCATCATGTATTTGATTATTTTtCCCCCTACTCAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGTCAGTGCAGGGGATTGTTCTTAGGCTTCTTCAATTTGTATGTATGTATGTGTCATGTaCAAGGATCTTTTTTCCTCTCTTTTTATTTATTGCATAGGGATCTGTGTTGTCCTTGTTATTATACTTTTGGTTAACATGCACTTCAAAAGAACGGTTTTTGTTTGAATGGTATGAATGTTATCAATCATaTACCTGATCCATGATCTTAAATGATTTTCATTTTCATGTTTACAATTGAGCATTTTTATTTTGAATCACGAAGGTAGCCAATGATAGTCTTTACTTTCTCTTTGTAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTAGATAGTTATTCCCCTTTTATCCAACTTTGATTTGCTGATTGGTTTTGAGCTTCAGGGAATTATAGTTCACGATCTTTTTTCTCTAGGTCCACCTGGTGCtAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTGAGCACAGTTATAATACCTTTAATGAGGGGTTGAAAATTTTTCTTGCTATTTTACACCTGCAACTTTTTGCAAAATCAAATGTTGAAGATGAAAGTGcTTTCTGTATTTTGGTATGTGTAGATGTCTAACCGTTGTTTCCTCTACAGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTTAACGTTATCGAAGGCAGCAAATTTGCTACCACTTGCTGACACTGGGGGGGCCTAAATGCATGACAATCATTCCATTATCAGATATCTTAGGGTGGATTAGGgACTTTCTATGTTAAAAATTCATTACTCCATCCTGCCTGTGATTGCATCAGATCAAATCAAAGATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATTTCTTGATTCTTT

mRNA sequence

CCCAAGAAAAATCCAATCTCAGAGAGAGAAGTTGACGGCGAAATCTAGAGAGAGAAAGCTTCAAACCGGCATTAATGGCGGAAGGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCAACTTCTCACAATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCCAGAGGTTGCTGTTTCGTGATTTGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTTAACGTTATCGAAGGCAGCAAATTTGCTACCACTTGCTGACACTGGGGGGGCCTAAATGCATGACAATCATTCCATTATCAGATATCTTAGGGTGGATTAGGGACTTTCTATGTTAAAAATTCATTACTCCATCCTGCCTGTGATTGCATCAGATCAAATCAAAGATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATTTCTTGATTCTTT

Coding sequence (CDS)

ATGGCGGAAGGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCAACTTCTCACAATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCCAGAGGTTGCTGTTTCGTGATTTGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGggGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTAtGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTGGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCAGGTATGGCCACTAGGAATTATGCCATGCCTCCTGCAAGCTACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTATGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCtAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA

Protein sequence

MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY*
BLAST of Cucsa.084710 vs. Swiss-Prot
Match: BRN1L_ARATH (RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 1.6e-164
Identity = 300/437 (68.65%), Postives = 353/437 (80.78%), Query Frame = 1

Query: 9   ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCC 68
           E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCC
Sbjct: 3   EAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCC 62

Query: 69  FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEV 128
           F++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE EV
Sbjct: 63  FLLCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEV 122

Query: 129 SGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK 188
             LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVK
Sbjct: 123 QSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVK 182

Query: 189 WADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLM 248
           WADTE+ER  R+ QKAQS    + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG  
Sbjct: 183 WADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG-- 242

Query: 249 QYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV 308
            Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Sbjct: 243 -YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAM 302

Query: 309 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 368
                P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+I
Sbjct: 303 RGHPFPFAYPRGIVSPRPLSSS--PGSISPGMSTPL-GIGLSSVVQTEGPEGANLFIYNI 362

Query: 369 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 428
           P+EFGD+ELA +F++FG VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LG
Sbjct: 363 PREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLG 422

Query: 429 GKKLKVQLKRDNKQSKP 438
           GKKLKVQLKRD+   +P
Sbjct: 423 GKKLKVQLKRDSNNGQP 433

BLAST of Cucsa.084710 vs. Swiss-Prot
Match: BRN2L_ARATH (RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 8.3e-150
Identity = 272/427 (63.70%), Postives = 330/427 (77.28%), Query Frame = 1

Query: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76
           E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++A
Sbjct: 7   ENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDA 66

Query: 77  DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTI 136
           DK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV  LFS+YGTI
Sbjct: 67  DKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYGTI 126

Query: 137 KDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQA 196
           KDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQA
Sbjct: 127 KDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKERQA 186

Query: 197 RKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQS 256
           R+  K QS   +V   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q 
Sbjct: 187 RRLLKVQS---HVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQTQH 246

Query: 257 GFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAY 316
            F N+I P    G A++G      +PP L P    RN+     +Y    G   LQ+PMA+
Sbjct: 247 AFHNVISPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY----GYHGLQYPMAF 306

Query: 317 PGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDREL 376
           P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D+EL
Sbjct: 307 PRGMIPPRLPLTTVSPGISNNGTSIPSSL-------QTEGPAGANLFIYNIPREFEDQEL 366

Query: 377 ANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLK 436
           A +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI+TMNGCQL GKKLKVQLK
Sbjct: 367 AATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQLK 413

BLAST of Cucsa.084710 vs. Swiss-Prot
Match: CELF5_XENTR (CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.4e-72
Identity = 175/473 (37.00%), Postives = 261/473 (55.18%), Query Frame = 1

Query: 11  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVIC 70
           ++S + ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+  
Sbjct: 36  QQSDSMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTY 95

Query: 71  PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLF 130
            +R  A KA  A H +KTLPG + P+QVK AD E    + KLF+GML K  SE+EV+ +F
Sbjct: 96  CARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMF 155

Query: 131 SQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADT 190
             +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT
Sbjct: 156 QAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADT 215

Query: 191 EKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLP 250
           +KER  R+ Q+   Q           PSL  A+P   + PY+ Y      +  LMQ    
Sbjct: 216 DKERTLRRMQQMVGQLGIFT------PSL--ALP---ISPYSAY------AQALMQQQTT 275

Query: 251 PMQNQSG--------FPNM-IPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVP 310
            +    G        FP+  I Q+   N + G+P    P         PP   +A   VP
Sbjct: 276 VLSTSHGSYLSPSVAFPSCHIQQIGAVN-LNGLP--AAPITPASGLHSPPVIGTA--AVP 335

Query: 311 ALQHPM--AYPGGMMSPG-------VVSSSPGPGP--------------FTGGKN----S 370
            L  P+   +PG +  P        + ++S  P P              FTG +      
Sbjct: 336 GLVAPLTNGFPGLVPFPSSHPALDTIYTNSIVPYPAQSPALTVESLHPSFTGVQQYSAIY 395

Query: 371 PTSSMGKGSGG---------QIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVF 430
           PT+++   +           Q EGP G NLFIYH+PQEFGD EL   F  FG ++S+KVF
Sbjct: 396 PTAALTPVTHSTPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVF 455

Query: 431 VDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 439
           +D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Sbjct: 456 MDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 486

BLAST of Cucsa.084710 vs. Swiss-Prot
Match: CELF3_DANRE (CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 5.3e-72
Identity = 171/457 (37.42%), Postives = 252/457 (55.14%), Query Frame = 1

Query: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76
           +E D++KLF+GQ+P+++ E  L  +F++F  + E+ +I+DK T   +GC F+   +R+ A
Sbjct: 2   KEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESA 61

Query: 77  DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTI 136
            KA NA H +KTLPG + P+QVK AD E  R + KLF+GML K +S+ +V  +F  +G+I
Sbjct: 62  LKAQNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSI 121

Query: 137 KDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQA 196
           ++  +LRG    SKGCAF+KY++  +A AA+ A++G   + G+S  LVVK+ADTEKER  
Sbjct: 122 EECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGI 181

Query: 197 RKAQKAQSQATNVLNADSQHPSLFGAMPLGYVP-----PYNGYGYQAPGSYGLMQYHLPP 256
           R+ Q+  SQ   V++  S H   + A     V        + Y         +    L  
Sbjct: 182 RRMQQVASQ-LGVISPMSLHLGAYNAYTQALVQQQALVAQSAYLSPVATVAAVQMQQLAA 241

Query: 257 MQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAM-PPASYSAYPGVPALQHPMAYP 316
           +   S     I  +   +     PP +    AT   A+ PP + ++YP VPA  +  +  
Sbjct: 242 LNPSSIIATPIASITPSSG-TSTPPTIA---ATPVPALPPPIAVNSYPPVPAAPNGQSAS 301

Query: 317 GGMMSPGV---VSSSPGPGP----FTGGKN-SPTSSMGKGSGG----------------- 376
             + + GV    + SP   P    +TG ++ + T     G  G                 
Sbjct: 302 EALYTNGVHPYQAQSPALDPLQQAYTGMQHYTATYPAAYGLVGQPFPHQPTLVAQQPQQP 361

Query: 377 ----QIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSY 436
               Q EGP G N+FIYH+PQEF D E+   F  FG V+SAKVFVD+ +  SKCFGFVS+
Sbjct: 362 QQLQQREGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSF 421

Query: 437 DSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 439
           D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Sbjct: 422 DNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452

BLAST of Cucsa.084710 vs. Swiss-Prot
Match: CELF5_HUMAN (CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-71
Identity = 175/479 (36.53%), Postives = 249/479 (51.98%), Query Frame = 1

Query: 4   GSRGGERK--ESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRA 63
           GS G E    +    ++ D++KLFVGQ+P+H+ E  L  +F++F  + E+ +++D  T  
Sbjct: 25  GSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGM 84

Query: 64  SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKN 123
            +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E     + KLF+GML K 
Sbjct: 85  HKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQ 144

Query: 124 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 183
            SE++V  LF  +G I +  +LRG   +SKGCAF+K+ +  +A AA+ A++G   M G+S
Sbjct: 145 QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 204

Query: 184 VPLVVKWADTEKERQARK-------------------------AQKAQSQATNVLNADSQ 243
             LVVK+ADT+KER  R+                         AQ    Q T VL+    
Sbjct: 205 SSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGS 264

Query: 244 HPS---LFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMR 303
           + S    F    +  +   +  G  A         H PP+   +  P ++  +  G A  
Sbjct: 265 YLSPGVAFSPCHIQQIGAVSLNGLPATPIAPASGLHSPPLLGTTAVPGLVAPITNGFA-- 324

Query: 304 GIPPDLG--PGMAT--RNYAMP-PAS--------YSAYPGVPALQHPMAYPGGMMSPGVV 363
           G+ P  G  P + T   N  +P PA         + A+ GV   Q+   YP   ++P + 
Sbjct: 325 GVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQ--QYTAMYPTAAITP-IA 384

Query: 364 SSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRV 423
            S P P P    +             Q EGP G NLFIYH+PQEFGD EL   F  FG +
Sbjct: 385 HSVPQPPPLLQQQ-------------QREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNI 444

Query: 424 LSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY 439
           +S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR      PY
Sbjct: 445 ISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDPGHPY 485

BLAST of Cucsa.084710 vs. TrEMBL
Match: A0A0A0K5R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 3.5e-256
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 1

Query: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
           MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
           VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300

Query: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360
           PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI
Sbjct: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360

Query: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 420
           PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG
Sbjct: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 420

Query: 421 GKKLKVQLKRDNKQSKPY 439
           GKKLKVQLKRDNKQSKPY
Sbjct: 421 GKKLKVQLKRDNKQSKPY 438

BLAST of Cucsa.084710 vs. TrEMBL
Match: A0A061DQ15_THECC (RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 1.5e-201
Identity = 351/434 (80.88%), Postives = 385/434 (88.71%), Query Frame = 1

Query: 9   ERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFV 68
           E K+     +E+SVKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTRASRGCCFV
Sbjct: 3   EGKKEKKATDEESVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 62

Query: 69  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSG 128
           ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS 
Sbjct: 63  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSA 122

Query: 129 LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA 188
           LFS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+ ALEAINGK KMEGS+VPLVVKWA
Sbjct: 123 LFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALDALEAINGKHKMEGSNVPLVVKWA 182

Query: 189 DTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYH 248
           DTEKERQAR+AQKAQSQA+N+ NADS HPSLFGA+P+GY  P+NGYGYQAPGSYGLMQY 
Sbjct: 183 DTEKERQARRAQKAQSQASNISNADSPHPSLFGALPMGYAAPFNGYGYQAPGSYGLMQYR 242

Query: 249 LPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHP 308
           LPPMQNQ  F NMIP +NQG+AMRGI PDL P +A RNY MPPASY  SAYP VP +Q+P
Sbjct: 243 LPPMQNQPAFHNMIPPVNQGSAMRGITPDLAPNIAPRNYVMPPASYVGSAYPAVPGIQYP 302

Query: 309 MAYPGGMMSPGVVSSSPG--PGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 368
           MAYPGG+MS   ++SSPG  P   T   +S +SS+G  SGGQIEGPPGANLFIYHIPQEF
Sbjct: 303 MAYPGGIMSHRPLTSSPGSVPPANTTSNSSSSSSVGTSSGGQIEGPPGANLFIYHIPQEF 362

Query: 369 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKL 428
           GD+ELAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKL
Sbjct: 363 GDQELANAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQNAINVMNGCQLGGKKL 422

Query: 429 KVQLKRDNKQSKPY 439
           KVQLKRDNKQ+KPY
Sbjct: 423 KVQLKRDNKQNKPY 436

BLAST of Cucsa.084710 vs. TrEMBL
Match: W9SZM7_9ROSA (CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 8.0e-200
Identity = 350/433 (80.83%), Postives = 382/433 (88.22%), Query Frame = 1

Query: 10  RKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVI 69
           +KE  +   E+SVKLFVGQVPK+MTE QLL MFQEFALVDEVNII+DK TRASRGCCFVI
Sbjct: 5   KKERKSGGSEESVKLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVI 64

Query: 70  CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGL 129
           CPSRQEADKAVNACHNKKTLPGAS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS L
Sbjct: 65  CPSRQEADKAVNACHNKKTLPGASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSAL 124

Query: 130 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWAD 189
           FS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+A+LEAINGK KMEGSSVPLVVKWAD
Sbjct: 125 FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWAD 184

Query: 190 TEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHL 249
           TEKERQARKAQKAQSQ +N+ N+D+QHPSLFGA+P+GYVPPYNGYGYQ PG+YGLMQY L
Sbjct: 185 TEKERQARKAQKAQSQVSNLPNSDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRL 244

Query: 250 PPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPM 309
            PMQNQ GF NMIP +NQGNA+RGI PDL P M  RNY MPP ++  SAYPG+P LQHPM
Sbjct: 245 SPMQNQPGFHNMIPPINQGNALRGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPM 304

Query: 310 AYPGGMMSPGVVSSSPGP-GPFTGGKNSPTS-SMGKGSGGQIEGPPGANLFIYHIPQEFG 369
           AYPGGMMS   +S SPG   P     NS TS    KGSGGQ+EGPPGANLFIYHIPQEFG
Sbjct: 305 AYPGGMMSHRPLSGSPGSMPPAVMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFG 364

Query: 370 DRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLK 429
           D++LAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLK
Sbjct: 365 DQDLANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLK 424

Query: 430 VQLKRDNKQSKPY 439
           VQLKRDNKQ+KPY
Sbjct: 425 VQLKRDNKQNKPY 437

BLAST of Cucsa.084710 vs. TrEMBL
Match: A0A0D2R6M7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 1.8e-199
Identity = 348/442 (78.73%), Postives = 389/442 (88.01%), Query Frame = 1

Query: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
           MAEG +    K+++N+E   SVKLFVGQVPKHMTE Q+L MF+EFALVDEVNII+DK TR
Sbjct: 1   MAEGKK---EKKATNEE---SVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATR 60

Query: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKN
Sbjct: 61  ASRGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKN 120

Query: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
           VSEDEVS LFS+YGT+KDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSS
Sbjct: 121 VSEDEVSALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
           VPLVVKWADTEKERQAR+AQKAQSQA+N+ NADS HPSLFGA+P+GYVPPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 300
           SYGLMQY LPPMQNQ  F NMIP +NQG+++RGI PDL P +A RNY +PP SY  SAYP
Sbjct: 241 SYGLMQYRLPPMQNQPAFNNMIPHVNQGSSLRGITPDLAPNIAPRNYPVPPTSYVGSAYP 300

Query: 301 GVPALQHPMAYPGGMMSPGVVSSSPG--PGPFTGGKNSPTSSMGKGSGGQIEGPPGANLF 360
            VP LQ+PMAYPGG+M+  +++ SPG  P       +S +S +G  SGG IEGPPGANLF
Sbjct: 301 AVPGLQYPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGHIEGPPGANLF 360

Query: 361 IYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNG 420
           IYHIPQEFGD+ELAN+F+ FGRVLS KVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNG
Sbjct: 361 IYHIPQEFGDQELANAFQGFGRVLSTKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNG 420

Query: 421 CQLGGKKLKVQLKRDNKQSKPY 439
           CQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 CQLGGKKLKVQLKRDNKQNKPY 436

BLAST of Cucsa.084710 vs. TrEMBL
Match: B9S3Y1_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0556860 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 8.9e-199
Identity = 350/435 (80.46%), Postives = 387/435 (88.97%), Query Frame = 1

Query: 9   ERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFV 68
           ++KE  + EE  SVKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTRASRGCCFV
Sbjct: 4   DKKEKKSSEE--SVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 63

Query: 69  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSG 128
           ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS 
Sbjct: 64  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSE 123

Query: 129 LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA 188
           LFS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSSVPLVVKWA
Sbjct: 124 LFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 183

Query: 189 DTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYH 248
           DTEKERQAR+AQK QSQA+N+ NADSQHPSLFGA+P+GYVP YNGYGYQAPG+YGLM Y 
Sbjct: 184 DTEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYR 243

Query: 249 LPPMQNQSGFPNMIPQLNQGNAMR-GIPPDLGPGMATRNYAMPPASY--SAYPGVPALQH 308
           LPP+Q+Q  F ++IP +NQGNA+R G+ PDLGP M  RNYA+PPASY  SAYP VP +Q+
Sbjct: 244 LPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQY 303

Query: 309 PMAYPGGMMSPGVVSSSPGP-GPFTGGKNSPTSS-MGKGSGGQIEGPPGANLFIYHIPQE 368
           PMAYPGGMMSP  +SSSPG   P  G  NS TSS +   SGGQ+EGPPG+NLFIYHIPQE
Sbjct: 304 PMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQE 363

Query: 369 FGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKK 428
           FGD+ELA++F+ +G+VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKK
Sbjct: 364 FGDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKK 423

Query: 429 LKVQLKRDNKQSKPY 439
           LKVQLKRDNKQSKPY
Sbjct: 424 LKVQLKRDNKQSKPY 436

BLAST of Cucsa.084710 vs. TAIR10
Match: AT4G03110.1 (AT4G03110.1 RNA-binding protein-defense related 1)

HSP 1 Score: 580.5 bits (1495), Expect = 8.8e-166
Identity = 300/437 (68.65%), Postives = 353/437 (80.78%), Query Frame = 1

Query: 9   ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCC 68
           E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCC
Sbjct: 3   EAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCC 62

Query: 69  FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEV 128
           F++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE EV
Sbjct: 63  FLLCPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEV 122

Query: 129 SGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVK 188
             LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVK
Sbjct: 123 QSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVK 182

Query: 189 WADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLM 248
           WADTE+ER  R+ QKAQS    + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG  
Sbjct: 183 WADTERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG-- 242

Query: 249 QYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV 308
            Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Sbjct: 243 -YMLPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAM 302

Query: 309 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 368
                P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+I
Sbjct: 303 RGHPFPFAYPRGIVSPRPLSSS--PGSISPGMSTPL-GIGLSSVVQTEGPEGANLFIYNI 362

Query: 369 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 428
           P+EFGD+ELA +F++FG VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LG
Sbjct: 363 PREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLG 422

Query: 429 GKKLKVQLKRDNKQSKP 438
           GKKLKVQLKRD+   +P
Sbjct: 423 GKKLKVQLKRDSNNGQP 433

BLAST of Cucsa.084710 vs. TAIR10
Match: AT1G03457.2 (AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 523.9 bits (1348), Expect = 9.8e-149
Identity = 272/436 (62.39%), Postives = 330/436 (75.69%), Query Frame = 1

Query: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76
           E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++A
Sbjct: 7   ENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDA 66

Query: 77  DKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEDEVS 136
           DK +N+ HNKKTLPGASSPLQVKYADGELERL         EHKLF+GMLPKNVSE EV 
Sbjct: 67  DKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQ 126

Query: 137 GLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKW 196
            LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKW
Sbjct: 127 SLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKW 186

Query: 197 ADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY 256
           ADTEKERQAR+  K QS   +V   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y
Sbjct: 187 ADTEKERQARRLLKVQS---HVSRLDPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---Y 246

Query: 257 HLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGV 316
            LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G 
Sbjct: 247 MLPPIQTQHAFHNVISPNQGNGRALQGTALTESVPPRLAP---RRNFPTALGNY----GY 306

Query: 317 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 376
             LQ+PMA+P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+I
Sbjct: 307 HGLQYPMAFPRGMIPPRLPLTTVSPGISNNGTSIPSSL-------QTEGPAGANLFIYNI 366

Query: 377 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 436
           P+EF D+ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI+TMNGCQL 
Sbjct: 367 PREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLS 422

BLAST of Cucsa.084710 vs. TAIR10
Match: AT4G16280.2 (AT4G16280.2 RNA binding;abscisic acid binding)

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-41
Identity = 106/305 (34.75%), Postives = 163/305 (53.44%), Query Frame = 1

Query: 17  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEA 76
           +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++A
Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174

Query: 77  DKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEDEVSGLFSQY 136
           D+A+ A HN+ TLPG + P+QV+YADGE ER   LE KLF+G L K  +E EV  +F Q+
Sbjct: 175 DRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQF 234

Query: 137 GTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKE 196
           G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ 
Sbjct: 235 GHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRP 294

Query: 197 RQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLP 256
           +     + A                    + LG  P +   G +   ++G       H  
Sbjct: 295 KPGESREMAP------------------PVGLGSGPRFQASGPRPTSNFGDSSGDVSHTN 354

Query: 257 PMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYAMPPASYSAYPGVPALQHP 312
           P +  +   N+ P  N G  +RG   D    PG AT   N   P   Y    GVP L +P
Sbjct: 355 PWRPATS-RNVGPPSNTG--IRGAGSDFSPKPGQATLPSNQGGPLGGY----GVPPL-NP 393


HSP 2 Score: 63.9 bits (154), Expect = 2.8e-10
Identity = 62/253 (24.51%), Postives = 103/253 (40.71%), Query Frame = 1

Query: 111 KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQ-TSKGCAFLKYETKDQAVAALEA 170
           KLF+G +P+  +E+E+   F Q+G + ++ +++  +    +GC F+KY T   A  A+ A
Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180

Query: 171 INGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVP 230
           ++ +  + G + P+ V++AD E+ER      K    + N    + +   +F  +  G+V 
Sbjct: 181 LHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIF--LQFGHVE 240

Query: 231 P--YNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY 290
                   Y+     G ++Y      ++      I  LN    MRG    L    A    
Sbjct: 241 DVYLMRDEYRQSRGCGFVKY-----SSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKR 300

Query: 291 AMPPASYSAYPGVPALQHPMAYPGGMM-------SPGVVSSSPGPGPFTGGKNSPTSSMG 350
             P  S    P V     P     G         S G VS +    P T     P S+ G
Sbjct: 301 PKPGESREMAPPVGLGSGPRFQASGPRPTSNFGDSSGDVSHTNPWRPATSRNVGPPSNTG 360

Query: 351 -KGSGGQIEGPPG 353
            +G+G      PG
Sbjct: 361 IRGAGSDFSPKPG 366

BLAST of Cucsa.084710 vs. TAIR10
Match: AT2G47310.1 (AT2G47310.1 flowering time control protein-related / FCA gamma-related)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 72/267 (26.97%), Postives = 133/267 (49.81%), Query Frame = 1

Query: 10  RKESSNQEEEDSV-KLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFV 69
           R +S+    + S+ KL+V  + K  TE  +  +F+++  V E+ + +DK T      CF+
Sbjct: 97  RSQSATDNADGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFI 156

Query: 70  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPK 129
                +E + A+ A   + T PG   P++V++A+ E ER+           KL++  L K
Sbjct: 157 KYKKVEEGNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNK 216

Query: 130 NVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGS 189
             ++ EV+ +FS+YG I+D+ +     +  +G AF+++  K+ A+AA++A+NG   + GS
Sbjct: 217 QTTKMEVNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGS 276

Query: 190 SVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAP 249
             PL+V++AD +K R   +     +            P++    P  +  PY  +  + P
Sbjct: 277 DQPLIVRFADPKKPRLGEQRSTFNTP-----------PAMQHFDPNWHSQPYPQWENKEP 336

Query: 250 GSYGLMQYHLPPMQNQSGFPNMIPQLN 267
               ++Q+H     + S  PN  P  N
Sbjct: 337 APPRVVQHH-----DFSSQPNHFPHQN 347

BLAST of Cucsa.084710 vs. TAIR10
Match: AT3G13224.2 (AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-12
Identity = 88/374 (23.53%), Postives = 143/374 (38.24%), Query Frame = 1

Query: 8   GERKESSNQEEEDSV---KLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG 67
           G R  + N +  D     K+F+G + K  T       F ++  + +  I+RD+ T   RG
Sbjct: 2   GSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRG 61

Query: 68  CCFVICPSRQEADKAVNACHN--------KKTLPGASSPLQVKYADGELERLEHKLFIGM 127
             F+        DK +   H         K+T+P  +   Q K      +    K+F+G 
Sbjct: 62  FGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSK------DIKTKKIFVGG 121

Query: 128 LPKNVSEDEVSGLFSQYGTIKDLQILRGSQ-QTSKGCAFLKYETKDQAVAALEAINGKCK 187
           +P  V+EDE+   F++YG + + Q++R  +   S+G  F+ +++++     L   N    
Sbjct: 122 IPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGN---- 181

Query: 188 MEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLG--------- 247
                   ++  ADT+ E +  + +K+ +++          P  +G+ P G         
Sbjct: 182 --------MIDMADTQVEIKKAEPKKSLNRS----------PPSYGSHPRGRSSNDSYAS 241

Query: 248 YVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRN 307
           Y  PY G+     G YG    H P      G P        G     + P+ G G    N
Sbjct: 242 YGGPYGGF----DGGYG----HPPGPIRSHGGPASRYAGGYGYGRGSVGPEFGGGY--NN 301

Query: 308 YAMPPASYSAYPGVPALQHPMAY-PGGMMSPGVVSSSPGPGPF----TGGKNSPTSSMGK 355
           Y     S   Y   P L +   + P G    G      G G +     GG        G 
Sbjct: 302 YG--GGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGGGEGYGGYGGP 335

BLAST of Cucsa.084710 vs. NCBI nr
Match: gi|449462310|ref|XP_004148884.1| (PREDICTED: RNA-binding protein BRN1 [Cucumis sativus])

HSP 1 Score: 891.7 bits (2303), Expect = 5.1e-256
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 1

Query: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
           MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
           VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300

Query: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360
           PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI
Sbjct: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360

Query: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 420
           PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG
Sbjct: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 420

Query: 421 GKKLKVQLKRDNKQSKPY 439
           GKKLKVQLKRDNKQSKPY
Sbjct: 421 GKKLKVQLKRDNKQSKPY 438

BLAST of Cucsa.084710 vs. NCBI nr
Match: gi|659101095|ref|XP_008451423.1| (PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo])

HSP 1 Score: 889.4 bits (2297), Expect = 2.5e-255
Identity = 437/438 (99.77%), Postives = 437/438 (99.77%), Query Frame = 1

Query: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
           MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
           VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV 300

Query: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360
           PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI
Sbjct: 301 PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHI 360

Query: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLG 420
           PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLG
Sbjct: 361 PQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLG 420

Query: 421 GKKLKVQLKRDNKQSKPY 439
           GKKLKVQLKRDNKQSKPY
Sbjct: 421 GKKLKVQLKRDNKQSKPY 438

BLAST of Cucsa.084710 vs. NCBI nr
Match: gi|590718175|ref|XP_007050757.1| (RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao])

HSP 1 Score: 710.3 bits (1832), Expect = 2.1e-201
Identity = 351/434 (80.88%), Postives = 385/434 (88.71%), Query Frame = 1

Query: 9   ERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFV 68
           E K+     +E+SVKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTRASRGCCFV
Sbjct: 3   EGKKEKKATDEESVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 62

Query: 69  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSG 128
           ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS 
Sbjct: 63  ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSA 122

Query: 129 LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWA 188
           LFS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+ ALEAINGK KMEGS+VPLVVKWA
Sbjct: 123 LFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALDALEAINGKHKMEGSNVPLVVKWA 182

Query: 189 DTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYH 248
           DTEKERQAR+AQKAQSQA+N+ NADS HPSLFGA+P+GY  P+NGYGYQAPGSYGLMQY 
Sbjct: 183 DTEKERQARRAQKAQSQASNISNADSPHPSLFGALPMGYAAPFNGYGYQAPGSYGLMQYR 242

Query: 249 LPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHP 308
           LPPMQNQ  F NMIP +NQG+AMRGI PDL P +A RNY MPPASY  SAYP VP +Q+P
Sbjct: 243 LPPMQNQPAFHNMIPPVNQGSAMRGITPDLAPNIAPRNYVMPPASYVGSAYPAVPGIQYP 302

Query: 309 MAYPGGMMSPGVVSSSPG--PGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEF 368
           MAYPGG+MS   ++SSPG  P   T   +S +SS+G  SGGQIEGPPGANLFIYHIPQEF
Sbjct: 303 MAYPGGIMSHRPLTSSPGSVPPANTTSNSSSSSSVGTSSGGQIEGPPGANLFIYHIPQEF 362

Query: 369 GDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKL 428
           GD+ELAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKL
Sbjct: 363 GDQELANAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQNAINVMNGCQLGGKKL 422

Query: 429 KVQLKRDNKQSKPY 439
           KVQLKRDNKQ+KPY
Sbjct: 423 KVQLKRDNKQNKPY 436

BLAST of Cucsa.084710 vs. NCBI nr
Match: gi|703161142|ref|XP_010112715.1| (CUGBP Elav-like family member 5 [Morus notabilis])

HSP 1 Score: 704.5 bits (1817), Expect = 1.1e-199
Identity = 350/433 (80.83%), Postives = 382/433 (88.22%), Query Frame = 1

Query: 10  RKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVI 69
           +KE  +   E+SVKLFVGQVPK+MTE QLL MFQEFALVDEVNII+DK TRASRGCCFVI
Sbjct: 5   KKERKSGGSEESVKLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVI 64

Query: 70  CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGL 129
           CPSRQEADKAVNACHNKKTLPGAS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS L
Sbjct: 65  CPSRQEADKAVNACHNKKTLPGASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSAL 124

Query: 130 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWAD 189
           FS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+A+LEAINGK KMEGSSVPLVVKWAD
Sbjct: 125 FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWAD 184

Query: 190 TEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHL 249
           TEKERQARKAQKAQSQ +N+ N+D+QHPSLFGA+P+GYVPPYNGYGYQ PG+YGLMQY L
Sbjct: 185 TEKERQARKAQKAQSQVSNLPNSDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRL 244

Query: 250 PPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGVPALQHPM 309
            PMQNQ GF NMIP +NQGNA+RGI PDL P M  RNY MPP ++  SAYPG+P LQHPM
Sbjct: 245 SPMQNQPGFHNMIPPINQGNALRGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPM 304

Query: 310 AYPGGMMSPGVVSSSPGP-GPFTGGKNSPTS-SMGKGSGGQIEGPPGANLFIYHIPQEFG 369
           AYPGGMMS   +S SPG   P     NS TS    KGSGGQ+EGPPGANLFIYHIPQEFG
Sbjct: 305 AYPGGMMSHRPLSGSPGSMPPAVMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFG 364

Query: 370 DRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLK 429
           D++LAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLK
Sbjct: 365 DQDLANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLK 424

Query: 430 VQLKRDNKQSKPY 439
           VQLKRDNKQ+KPY
Sbjct: 425 VQLKRDNKQNKPY 437

BLAST of Cucsa.084710 vs. NCBI nr
Match: gi|823202678|ref|XP_012435896.1| (PREDICTED: RNA-binding protein BRN1-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 703.4 bits (1814), Expect = 2.6e-199
Identity = 348/442 (78.73%), Postives = 389/442 (88.01%), Query Frame = 1

Query: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
           MAEG +    K+++N+E   SVKLFVGQVPKHMTE Q+L MF+EFALVDEVNII+DK TR
Sbjct: 1   MAEGKK---EKKATNEE---SVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATR 60

Query: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKN
Sbjct: 61  ASRGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKN 120

Query: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
           VSEDEVS LFS+YGT+KDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSS
Sbjct: 121 VSEDEVSALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
           VPLVVKWADTEKERQAR+AQKAQSQA+N+ NADS HPSLFGA+P+GYVPPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 300
           SYGLMQY LPPMQNQ  F NMIP +NQG+++RGI PDL P +A RNY +PP SY  SAYP
Sbjct: 241 SYGLMQYRLPPMQNQPAFNNMIPHVNQGSSLRGITPDLAPNIAPRNYPVPPTSYVGSAYP 300

Query: 301 GVPALQHPMAYPGGMMSPGVVSSSPG--PGPFTGGKNSPTSSMGKGSGGQIEGPPGANLF 360
            VP LQ+PMAYPGG+M+  +++ SPG  P       +S +S +G  SGG IEGPPGANLF
Sbjct: 301 AVPGLQYPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGHIEGPPGANLF 360

Query: 361 IYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNG 420
           IYHIPQEFGD+ELAN+F+ FGRVLS KVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNG
Sbjct: 361 IYHIPQEFGDQELANAFQGFGRVLSTKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNG 420

Query: 421 CQLGGKKLKVQLKRDNKQSKPY 439
           CQLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 CQLGGKKLKVQLKRDNKQNKPY 436

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BRN1L_ARATH1.6e-16468.65RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1[more]
BRN2L_ARATH8.3e-15063.70RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1[more]
CELF5_XENTR2.4e-7237.00CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1[more]
CELF3_DANRE5.3e-7237.42CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2[more]
CELF5_HUMAN1.6e-7136.53CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K5R5_CUCSA3.5e-256100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1[more]
A0A061DQ15_THECC1.5e-20180.88RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515... [more]
W9SZM7_9ROSA8.0e-20080.83CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1[more]
A0A0D2R6M7_GOSRA1.8e-19978.73Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1[more]
B9S3Y1_RICCO8.9e-19980.46RNA binding protein, putative OS=Ricinus communis GN=RCOM_0556860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G03110.18.8e-16668.65 RNA-binding protein-defense related 1[more]
AT1G03457.29.8e-14962.39 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G16280.22.3e-4134.75 RNA binding;abscisic acid binding[more]
AT2G47310.11.2e-2426.97 flowering time control protein-related / FCA gamma-related[more]
AT3G13224.21.0e-1223.53 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
Match NameE-valueIdentityDescription
gi|449462310|ref|XP_004148884.1|5.1e-256100.00PREDICTED: RNA-binding protein BRN1 [Cucumis sativus][more]
gi|659101095|ref|XP_008451423.1|2.5e-25599.77PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo][more]
gi|590718175|ref|XP_007050757.1|2.1e-20180.88RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao][more]
gi|703161142|ref|XP_010112715.1|1.1e-19980.83CUGBP Elav-like family member 5 [Morus notabilis][more]
gi|823202678|ref|XP_012435896.1|2.6e-19978.73PREDICTED: RNA-binding protein BRN1-like isoform X1 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002343Hud_Sxl_RNA
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR002343Hud_Sxl_RNA
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.084710.1Cucsa.084710.1mRNA
Cucsa.084710.2Cucsa.084710.2mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 34..96
score: 9.5E-17coord: 277..347
score: 2.1
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 276..349
score: 6.6E-21coord: 33..108
score: 5.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 275..353
score: 16.79coord: 32..112
score: 16
IPR002343Paraneoplastic encephalomyelitis antigenPRINTSPR00961HUDSXLRNAcoord: 52..64
score: 7.2E-5coord: 37..52
score: 7.2E-5coord: 93..110
score: 7.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 15..111
score: 1.3E-20coord: 112..126
score: 1.5E-25coord: 271..358
score: 1.5
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 272..355
score: 4.14E-42coord: 32..122
score: 4.14
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 216..232
score: 2.5E-133coord: 271..357
score: 2.5E-133coord: 16..168
score: 2.5E
NoneNo IPR availablePANTHERPTHR24012:SF414SUBFAMILY NOT NAMEDcoord: 271..357
score: 2.5E-133coord: 216..232
score: 2.5E-133coord: 16..168
score: 2.5E

The following gene(s) are paralogous to this gene:

None