Cucsa.079080.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGGGATGACGATGACATAGTTAATTTAGCTTTAGTGTACTTTATAGAGCTGTCATTGTTAGAAAAAGATAGGCAGACCAAAGTGGACCGAACTTTATTTAGGATTACAGATGATTGGACCACATTTAACAATTATGATTGGGGAGGGTTGGTTTTTGGACGCACAATTTCTGCCTTAAAACGAGCCTTGGACATGCAACATGCCAAGGGAAAGAATAAGTAAGCTAACACAAAATATACTATCATGGAATTTCCGCATGCGTTACAGGTATGTTACTTCCTACTTCAAACTTATGCACATATTTATATATACATATATCTCAGAACACTTGCTAAACTTGTTTTGTTGAATATGGAATAGGTTTGGGCATATGAGTCTATACCAACCATCACTGAATGTGGTGTAAATAAAGTAAACAACGATGTCATGCCACGAATGCTAAGGTGGGTATGCGAACTATCTCAGAAGTCTTCTGTCCTACAGAGCCAGGTGTTTGACTCGCCAATGGTAAGTAGCAACCCAATAGTAACTAACTTACCAAATGCACGACTTTGTTCCTTTTTGTTTGGCCTAACTACATTTGTTTTTCCACTTTGTAGTTCATAATTAATGCGGTAATTGAGATGACGCCTAAAGATGAGCATTTAAGAATATCTTCAGGCGAACTTTTTGACAAACCCCATCCATCTAACATCGTTCCTGAGAAGAATGGTGGTTCAAAATGA gggggatgacgatgacatagttaatttagctttagtgtactttatagagctgtcattgttagaaaaagataggcagaccaaagtggaccgaactttatttaggattacagatgattggaccacatttaacaattatgattggggagggttggtttttggacgcacaatttctgccttaaaacgagccttggacatgcaacatgccaagggaaagaataagtaagctaacacaaaatatactatcatggaatttccgcatgcgttacaggtttgggcatatgagtctataccaaccatcactgaatgtggtgtaaataaagtaaacaacgatgtcatgccacgaatgctaaggtgggtatgcgaactatctcagaagtcttctgtcctacagagccaggtgtttgactcgccaatgttcataattaatgcggtaattgagatgacgcctaaagatgagcatttaagaatatcttcaggcgaactttttgacaaaccccatccatctaacatcgttcctgagaagaatggtggttcaaaatga ATGGAATTTCCGCATGCGTTACAGGTTTGGGCATATGAGTCTATACCAACCATCACTGAATGTGGTGTAAATAAAGTAAACAACGATGTCATGCCACGAATGCTAAGGTGGGTATGCGAACTATCTCAGAAGTCTTCTGTCCTACAGAGCCAGGTGTTTGACTCGCCAATGTTCATAATTAATGCGGTAATTGAGATGACGCCTAAAGATGAGCATTTAAGAATATCTTCAGGCGAACTTTTTGACAAACCCCATCCATCTAACATCGTTCCTGAGAAGAATGGTGGTTCAAAATGA MEFPHALQVWAYESIPTITECGVNKVNNDVMPRMLRWVCELSQKSSVLQSQVFDSPMFIINAVIEMTPKDEHLRISSGELFDKPHPSNIVPEKNGGSK*
BLAST of Cucsa.079080.1 vs. TrEMBL
Match: A0A0A0KM59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141180 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-09 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
BLAST of Cucsa.079080.1 vs. NCBI nr
Match: gi|778688738|ref|XP_004148595.2| (PREDICTED: uncharacterized protein LOC101207436 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-33 Identity = 73/96 (76.04%), Postives = 80/96 (83.33%), Query Frame = 1
BLAST of Cucsa.079080.1 vs. NCBI nr
Match: gi|778688678|ref|XP_011652810.1| (PREDICTED: uncharacterized protein LOC105435109 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 2.8e-29 Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 1
BLAST of Cucsa.079080.1 vs. NCBI nr
Match: gi|700194767|gb|KGN49944.1| (hypothetical protein Csa_5G141180 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
BLAST of Cucsa.079080.1 vs. NCBI nr
Match: gi|778699090|ref|XP_011654656.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
BLAST of Cucsa.079080.1 vs. NCBI nr
Match: gi|778699094|ref|XP_011654657.1| (PREDICTED: uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
|