Cucsa.050140.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTATTCAAAGATGAAACAGGCGATCTTCAAGCCTCTGGAGTTTCTGGTGTTCATGTTGGCAATTACATCCTTTCTAGGGCAAGCTAAAGCCAAGTTCTGTTCTAACAGTCTAATTTACTCTCTTGTTCAGCTAATTCCTTGTAGGCCTTCACTGTCTCCATTCCACCCTATACCACCAAGTCTTGTCTGTTGCGATGCTATCAAAACTTTAGGCCAGTCTTGTATTTGTGCGTTGTTGGATGCTCCCCCTGTTTCTGGTGTTGATTATAACTTGGCCATGTCTCTGCCTCAGAAATGCGCTGCAAATTTCGAGCCATGTAACTATTTCTCCTTGCTTCTTGATCTCTCTACATTTTTCTAGTTTTTGTGTTGAAGATTCTTGAGAAACTTGGTTTCTAATGCAGGTTTCTAGAAGTTGGGACGATGGTGGGGTGTGTGAAGATGATGAATAACGCTGCTTATGATGTTTAGATAGATGTCATGGTTGGATATATGTTTAAGTTAAGAATAACTATGTTTGTTTCAACTTTGGAATGAGAACGACTTTAGAAATTCTTAGAGGTGCTTCATATCTCATTGGTTGAAAGATGAGTTTGGTGAGTGAT TCTGTATTCAAAGATGAAACAGGCGATCTTCAAGCCTCTGGAGTTTCTGGTGTTCATGTTGGCAATTACATCCTTTCTAGGGCAAGCTAAAGCCAAGTTCTGTTCTAACAGTCTAATTTACTCTCTTGTTCAGCTAATTCCTTGTAGGCCTTCACTGTCTCCATTCCACCCTATACCACCAAGTCTTGTCTGTTGCGATGCTATCAAAACTTTAGGCCAGTCTTGTATTTGTGCGTTGTTGGATGCTCCCCCTGTTTCTGGTGTTGATTATAACTTGGCCATGTCTCTGCCTCAGAAATGCGCTGCAAATTTCGAGCCATGTTTCTAGAAGTTGGGACGATGGTGGGGTGTGTGAAGATGATGAATAACGCTGCTTATGATGTTTAGATAGATGTCATGGTTGGATATATGTTTAAGTTAAGAATAACTATGTTTGTTTCAACTTTGGAATGAGAACGACTTTAGAAATTCTTAGAGGTGCTTCATATCTCATTGGTTGAAAGATGAGTTTGGTGAGTGAT ATGAAACAGGCGATCTTCAAGCCTCTGGAGTTTCTGGTGTTCATGTTGGCAATTACATCCTTTCTAGGGCAAGCTAAAGCCAAGTTCTGTTCTAACAGTCTAATTTACTCTCTTGTTCAGCTAATTCCTTGTAGGCCTTCACTGTCTCCATTCCACCCTATACCACCAAGTCTTGTCTGTTGCGATGCTATCAAAACTTTAGGCCAGTCTTGTATTTGTGCGTTGTTGGATGCTCCCCCTGTTTCTGGTGTTGATTATAACTTGGCCATGTCTCTGCCTCAGAAATGCGCTGCAAATTTCGAGCCATGTTTCTAG MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVCCDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF*
BLAST of Cucsa.050140.1 vs. TrEMBL
Match: A0A0A0K635_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428920 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 9.3e-54 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TrEMBL
Match: V4SWN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033078mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TrEMBL
Match: A0A067H6Y1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039389mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TrEMBL
Match: V4VI71_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033078mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-28 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TrEMBL
Match: A0A067LFX8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16722 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.2e-26 Identity = 51/97 (52.58%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TAIR10
Match: AT3G52130.1 (AT3G52130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 9.9e-23 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TAIR10
Match: AT3G07450.1 (AT3G07450.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22 Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. TAIR10
Match: AT5G48490.1 (AT5G48490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 3.4e-07 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. NCBI nr
Match: gi|449436265|ref|XP_004135913.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. NCBI nr
Match: gi|659122667|ref|XP_008461263.1| (PREDICTED: protein LIM1-like [Cucumis melo]) HSP 1 Score: 203.0 bits (515), Expect = 2.6e-49 Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. NCBI nr
Match: gi|567893105|ref|XP_006439073.1| (hypothetical protein CICLE_v10033078mg [Citrus clementina]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. NCBI nr
Match: gi|567893107|ref|XP_006439074.1| (hypothetical protein CICLE_v10033078mg [Citrus clementina]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1
BLAST of Cucsa.050140.1 vs. NCBI nr
Match: gi|643737323|gb|KDP43435.1| (hypothetical protein JCGZ_16722 [Jatropha curcas]) HSP 1 Score: 124.4 bits (311), Expect = 1.2e-25 Identity = 51/97 (52.58%), Postives = 72/97 (74.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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