CsaV3_UNG208670.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACTTTCCGTTTTGTCGAGCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCTGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATCTTCTTCATTTTGGATAATGAAAGCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGGTACGAAGTTGGACTAATTTGGAAACATTGGGCAATTTACTTTATACCTACTATTCCGTCTGGTTTTTGCTTTCTAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAG ATGATACTTTCCGTTTTGTCGAGCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCTGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATCTTCTTCATTTTGGATAATGAAAGCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAG ATGATACTTTCCGTTTTGTCGAGCCCAGCTTTGGTCTCTGGTTTGATGGTTGTACGTGCTAAAAATCCGGTACATTCCGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCTATGATCTTCCCAGTAGTTCATATAGGAGCTATAGCCGTTTCATTCCTATTCGTTGTTATGATGTTCCATATTCAAATAGCGGAGATTCACGAAGAAGTCTTGCGCTATTTACCTGTGAGTGGTATTATTGGACTGATCTTTTGGTGGGAAATCTTCTTCATTTTGGATAATGAAAGCATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTTAGATATACGGTTTATGCCGGAAAGTCTGATTTTATTAGTAGCCATGATTGGGGCTATAGTACTGACTATGCATAG MILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEIFFILDNESIPLLPTQRNTTSLRYTVYAGKSDFISSHDWGYSTDYA
BLAST of CsaV3_UNG208670.1 vs. NCBI nr
Match: YP_004849335.1 (NADH dehydrogenase subunit 6 (mitochondrion) [Cucumis sativus] >ADZ10762.1 NADH dehydrogenase subunit 6 (mitochondrion) [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. NCBI nr
Match: AEN56128.1 (hypothetical protein (mitochondrion) [Cucumis melo subsp. melo]) HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. NCBI nr
Match: AUD57050.1 (NADH dehydrogenase subunit 6 (mitochondrion) [Pentas lanceolata]) HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. NCBI nr
Match: AUD57051.1 (NADH dehydrogenase subunit 6 (mitochondrion) [Cephalanthus occidentalis] >AUD57053.1 NADH dehydrogenase subunit 6 (mitochondrion) [Deppea grandiflora]) HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. NCBI nr
Match: AUD57052.1 (NADH dehydrogenase subunit 6 (mitochondrion) [Cubanola domingensis] >AUD57054.1 NADH dehydrogenase subunit 6 (mitochondrion) [Guettarda scabra] >AUD57055.1 NADH dehydrogenase subunit 6 (mitochondrion) [Hillia triflora] >AUD57056.1 NADH dehydrogenase subunit 6 (mitochondrion) [Hymenodictyon parvifolium] >AUD57057.1 NADH dehydrogenase subunit 6 (mitochondrion) [Rondeletia odorata]) HSP 1 Score: 246.9 bits (629), Expect = 4.3e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TAIR10
Match: ATMG00270.1 (NADH dehydrogenase 6) HSP 1 Score: 243.4 bits (620), Expect = 8.6e-65 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TAIR10
Match: AT2G07718.1 (Cytochrome b/b6 protein) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TAIR10
Match: ATMG00590.1 (Cytochrome b/b6 protein) HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08 Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. Swiss-Prot
Match: sp|P60498|NU6M_BRACM (NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.5e-63 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. Swiss-Prot
Match: sp|Q02500|NU6M_WHEAT (NADH-ubiquinone oxidoreductase chain 6 OS=Triticum aestivum OX=4565 GN=ND6 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.4e-58 Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. Swiss-Prot
Match: sp|P60497|NU6M_ARATH (NADH-ubiquinone oxidoreductase chain 6 OS=Arabidopsis thaliana OX=3702 GN=ND6 PE=2 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 6.3e-57 Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. Swiss-Prot
Match: sp|P26850|NU6M_MARPO (NADH-ubiquinone oxidoreductase chain 6 OS=Marchantia polymorpha OX=3197 GN=ND6 PE=2 SV=2) HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41 Identity = 94/130 (72.31%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. Swiss-Prot
Match: sp|Q37626|NU6M_PROWI (NADH-ubiquinone oxidoreductase chain 6 OS=Prototheca wickerhamii OX=3111 GN=ND6 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29 Identity = 69/118 (58.47%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TrEMBL
Match: tr|G3EU06|G3EU06_CUCME (NADH-ubiquinone oxidoreductase chain 6 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TrEMBL
Match: tr|G3EIY7|G3EIY7_CUCSA (NADH-ubiquinone oxidoreductase chain 6 OS=Cucumis sativus OX=3659 GN=nad6 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TrEMBL
Match: tr|A0A2H4YAR6|A0A2H4YAR6_9GENT (NADH-ubiquinone oxidoreductase chain 6 OS=Rondeletia odorata OX=61944 GN=nad6 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.8e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TrEMBL
Match: tr|A0A2H4YAP9|A0A2H4YAP9_DEPGR (NADH-ubiquinone oxidoreductase chain 6 OS=Deppea grandiflora OX=43474 GN=nad6 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.8e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208670.1 vs. TrEMBL
Match: tr|A0A2H4YAP1|A0A2H4YAP1_9GENT (NADH-ubiquinone oxidoreductase chain 6 OS=Guettarda scabra OX=153753 GN=nad6 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.8e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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