CsaV3_UNG208560.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
BLAST of CsaV3_UNG208560.1 vs. NCBI nr
Match: YP_004849330.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis sativus] >ADZ10757.1 NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 6.5e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. NCBI nr
Match: AEN56123.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis melo subsp. melo]) HSP 1 Score: 240.4 bits (612), Expect = 3.2e-60 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. NCBI nr
Match: XP_023545342.1 (uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 233.8 bits (595), Expect = 3.0e-58 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. NCBI nr
Match: AKZ24744.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Symphoricarpos occidentalis]) HSP 1 Score: 233.0 bits (593), Expect = 5.2e-58 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. NCBI nr
Match: AHF22675.1 (NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria iinumae] >AHF22677.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AHF22678.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria chiloensis] >AHF22679.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria virginiana] >AHF22680.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. vesca] >AHF22681.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AHF22682.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34009.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34010.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria iinumae] >AKE34011.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34012.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria virginiana] >AKE34013.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria chiloensis] >PRQ15610.1 putative NADH:ubiquinone reductase (H(+)-translocating) (mitochondrion) [Rosa chinensis]) HSP 1 Score: 232.3 bits (591), Expect = 8.8e-58 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TAIR10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein) HSP 1 Score: 212.6 bits (540), Expect = 1.3e-55 Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TAIR10
Match: ATMG00990.1 (NADH dehydrogenase 3) HSP 1 Score: 212.6 bits (540), Expect = 1.3e-55 Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TAIR10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein) HSP 1 Score: 77.0 bits (188), Expect = 8.6e-15 Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. Swiss-Prot
Match: sp|P27062|NU3M_PANGI (NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 7.8e-58 Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. Swiss-Prot
Match: sp|O99869|NU3M_SOLTU (NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum OX=4113 GN=ND3 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-56 Identity = 110/118 (93.22%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. Swiss-Prot
Match: sp|P60159|NU3M_HELAN (NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. Swiss-Prot
Match: sp|Q36664|NU3M_PINSY (NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 SV=2) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52 Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. Swiss-Prot
Match: sp|P60160|NU3M_WHEAT (NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52 Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TrEMBL
Match: tr|G3EIY2|G3EIY2_CUCSA (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus OX=3659 GN=nad3 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 4.3e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TrEMBL
Match: tr|G3EU38|G3EU38_CUCME (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo OX=412675 GN=nad3 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.1e-60 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TrEMBL
Match: tr|A0A0K1ZFE9|A0A0K1ZFE9_9DIPS (NADH-ubiquinone oxidoreductase chain 3 OS=Symphoricarpos occidentalis OX=318448 GN=nad3 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.4e-58 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TrEMBL
Match: tr|A0A0B4L0X6|A0A0B4L0X6_FRAVE (NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria vesca subsp. bracteata OX=157670 GN=nad3 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.8e-58 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of CsaV3_UNG208560.1 vs. TrEMBL
Match: tr|A0A0B4L2A3|A0A0B4L2A3_9ROSA (NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria chiloensis OX=101007 GN=nad3 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.8e-58 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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