CsaV3_UNG208560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG208560
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionNADH-ubiquinone oxidoreductase chain 3
Locationscaffold18_1 : 685985 .. 686341 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA

mRNA sequence

ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA

Coding sequence (CDS)

ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTTCCATTTTCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATCCGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTCTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAGTAA

Protein sequence

MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
Homology
[Close]
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match: YP_004849330.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis sativus] >ADZ10757.1 NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 6.5e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match: AEN56123.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 240.4 bits (612), Expect = 3.2e-60
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLGLPFPF+SNS+TYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match: XP_023545342.1 (uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 3.0e-58
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGLPFPF+SNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVSLIPLGLPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match: AKZ24744.1 (NADH dehydrogenase subunit 3 (mitochondrion) [Symphoricarpos occidentalis])

HSP 1 Score: 233.0 bits (593), Expect = 5.2e-58
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLG+PFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGVPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII DPEVTFSFPWAVPLNKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match: AHF22675.1 (NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria iinumae] >AHF22677.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AHF22678.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria chiloensis] >AHF22679.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria virginiana] >AHF22680.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. vesca] >AHF22681.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AHF22682.1 NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34009.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34010.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria iinumae] >AKE34011.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria vesca subsp. bracteata] >AKE34012.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria virginiana] >AKE34013.1 NADH dehydrogenase subunit 3, partial (mitochondrion) [Fragaria chiloensis] >PRQ15610.1 putative NADH:ubiquinone reductase (H(+)-translocating) (mitochondrion) [Rosa chinensis])

HSP 1 Score: 232.3 bits (591), Expect = 8.8e-58
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLG+PFPF+SNSSTYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TAIR10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-55
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPI IYLVIS LVSLI LG+PFPF+SNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILF+I D EVTF FPWAVP NKIDLFG WSMMAFL ILTIGFLYEWKRGASDRE
Sbjct: 61  YLVSILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TAIR10
Match: ATMG00990.1 (NADH dehydrogenase 3)

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-55
Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPI IYLVIS LVSLI LG+PFPF+SNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 2   MSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 61

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILF+I D EVTF FPWAVP NKIDLFG WSMMAFL ILTIGFLYEWKRGASDRE
Sbjct: 62  YLVSILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASDRE 119

[Close]
BLAST of CsaV3_UNG208560 vs. TAIR10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein)

HSP 1 Score: 77.0 bits (188), Expect = 8.6e-15
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 0 

Query: 10  YLVIS---PLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSIL 69
           +L+IS   P+++ +  G+  P        PEKLS+YE G +P GDA  +F IR+Y+ +++
Sbjct: 13  FLLISSAIPVLAFLISGVLSPIRKG----PEKLSSYESGIEPIGDAWLQFRIRYYMFALV 72

Query: 70  FIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGA 115
           F++ D E  F +PWA+  + + +        F+LIL +G +Y W++GA
Sbjct: 73  FVVFDVETVFLYPWAMSFDVLGVSAFIEAFIFVLILILGLVYAWRKGA 116

[Close]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match: sp|P27062|NU3M_PANGI (NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 7.8e-58
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+PFPF+SNSSTYP+KLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPDKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII DPEVTFSFPWAVP NKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match: sp|O99869|NU3M_SOLTU (NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum OX=4113 GN=ND3 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-56
Identity = 110/118 (93.22%), Postives = 110/118 (93.22%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLGLPF FSSNSSTYPEK SAYECG DPSGDARSR DIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFLFSSNSSTYPEKSSAYECGLDPSGDARSRVDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII DPEVTFSFPWAVP NKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match: sp|P60159|NU3M_HELAN (NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           M EFAPICIYLVIS LVSLI LG+PF F+SNSSTYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII D EVTF FPWAV LNKIDLFG WSMMAFLLILTIGFLYEWKRGA D E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMAFLLILTIGFLYEWKRGALDWE 118

[Close]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match: sp|Q36664|NU3M_PINSY (NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVIS LV LIPLG+PF F+SN STYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVCLIPLGVPFLFASNGSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII D EVTF FPWAV LNKIDLFG WSMM FLLILTIGFLYEWK+GA D E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMVFLLILTIGFLYEWKKGALDWE 118

[Close]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match: sp|P60160|NU3M_WHEAT (NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-52
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           M EFAPICIYLVIS LVSLI LG+PF F+SNSSTYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII D EVTF FPWAV LNKIDLFG WSMMAFLLILTIGFLYEWKRGA D E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMAFLLILTIGFLYEWKRGALDWE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match: tr|G3EIY2|G3EIY2_CUCSA (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus OX=3659 GN=nad3 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.3e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match: tr|G3EU38|G3EU38_CUCME (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo OX=412675 GN=nad3 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-60
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLGLPFPF+SNS+TYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match: tr|A0A0K1ZFE9|A0A0K1ZFE9_9DIPS (NADH-ubiquinone oxidoreductase chain 3 OS=Symphoricarpos occidentalis OX=318448 GN=nad3 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.4e-58
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLG+PFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGVPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFII DPEVTFSFPWAVPLNKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match: tr|A0A0B4L0X6|A0A0B4L0X6_FRAVE (NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria vesca subsp. bracteata OX=157670 GN=nad3 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-58
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLG+PFPF+SNSSTYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match: tr|A0A0B4L2A3|A0A0B4L2A3_9ROSA (NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria chiloensis OX=101007 GN=nad3 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-58
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0 

Query: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60
           MSEFAPICIYLVISPLVSLIPLG+PFPF+SNSSTYPEKLSAYECGFDP GDARSRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 119
           YLVSILFIILDPEVTFSFPWAVPLNKID FGSWSMMAFLLILTIG LYEWKRGASDRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG208560 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004849330.16.5e-61100.00NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis sativus] >ADZ10757.1 NADH ... [more]
AEN56123.13.2e-6098.31NADH dehydrogenase subunit 3 (mitochondrion) [Cucumis melo subsp. melo][more]
XP_023545342.13.0e-5896.61uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo][more]
AKZ24744.15.2e-5896.61NADH dehydrogenase subunit 3 (mitochondrion) [Symphoricarpos occidentalis][more]
AHF22675.18.8e-5895.76NADH dehydrogenase subunit, partial (mitochondrion) [Fragaria iinumae] >AHF22677... [more]
BLAST of CsaV3_UNG208560 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07751.11.3e-5589.83NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein[more]
ATMG00990.11.3e-5589.83NADH dehydrogenase 3[more]
ATCG00440.18.6e-1535.19NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein[more]
BLAST of CsaV3_UNG208560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P27062|NU3M_PANGI7.8e-5893.22NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1[more]
sp|O99869|NU3M_SOLTU1.1e-5693.22NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum OX=4113 GN=ND3 PE=3 ... [more]
sp|P60159|NU3M_HELAN2.9e-5288.14NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 ... [more]
sp|Q36664|NU3M_PINSY2.9e-5286.44NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 ... [more]
sp|P60160|NU3M_WHEAT2.9e-5288.14NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 ... [more]
BLAST of CsaV3_UNG208560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|G3EIY2|G3EIY2_CUCSA4.3e-61100.00NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus OX=3659 GN=nad3 PE=3 S... [more]
tr|G3EU38|G3EU38_CUCME2.1e-6098.31NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo OX=412675 GN=... [more]
tr|A0A0K1ZFE9|A0A0K1ZFE9_9DIPS3.4e-5896.61NADH-ubiquinone oxidoreductase chain 3 OS=Symphoricarpos occidentalis OX=318448 ... [more]
tr|A0A0B4L0X6|A0A0B4L0X6_FRAVE5.8e-5895.76NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria vesca subsp. bract... [more]
tr|A0A0B4L2A3|A0A0B4L2A3_9ROSA5.8e-5895.76NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria chiloensis OX=1010... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3
IPR038430NDAH_ubi_oxred_su3_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0070469 respiratory chain
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG208560.1CsaV3_UNG208560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3DG3DSA:1.20.58.1610coord: 1..116
e-value: 2.2E-33
score: 116.7
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 31..114
e-value: 1.6E-30
score: 105.1
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 2..115
NoneNo IPR availablePANTHERPTHR11058:SF9NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 2..115

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG208560CmoCh12G007750Cucurbita moschata (Rifu)cmocucB0194
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG208560Bottle gourd (USVL1VR-Ls)cuclsiB159