CsaV3_7G005950.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGGTGAGTTTTGTAATGAAAAACGCATAACTCTATATTGAAGCTGCGAAAAAAAATATTCATATCTGTGTGTCCATGCCTGCATACACCTACCTCAACTGAATGTCAAGAAAATTTATAAAACGATATCATCATGAATTAATTGAATTCATCCTTCTCAATTATGTATTAAACTCGCATAACCCTTTTAACCACTAGAGTTATAACAATTTATTTTAGTCTTTCAGTTTTCGAAATGCCCAATTTAGCCATTAGTTCAGCTTTTTAAGAAAAAAAAAAGTACCATTGTTTGGTCGTTACCATATGATCTTGTCACGTCAAATTTGCCTCAATGGCTTGAATACATATTCATATTAGGTACATGACTATGCATATATGTTATTTATTTTATACTAACGAGTGTTATTTTTTTTTTCACTGAAAAATGCAGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGA ATGCCGATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGA ATGCCGATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGA MPMNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIGTYRPATEMAKPESKGLW
BLAST of CsaV3_7G005950.1 vs. NCBI nr
Match: KGN43654.1 (hypothetical protein Csa_7G051340 [Cucumis sativus]) HSP 1 Score: 166.4 bits (420), Expect = 4.2e-38 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. NCBI nr
Match: XP_008455536.1 (PREDICTED: O-acyltransferase WSD1-like [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 1.4e-33 Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. NCBI nr
Match: XP_013456649.1 (O-acyltransferase WSD1 isoform X2 [Medicago truncatula] >KEH30680.1 O-acyltransferase WSD1-like protein [Medicago truncatula]) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. NCBI nr
Match: KEH30682.1 (O-acyltransferase WSD1-like protein [Medicago truncatula]) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. NCBI nr
Match: XP_013456651.2 (O-acyltransferase WSD1 [Medicago truncatula]) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TAIR10
Match: AT5G22490.1 (O-acyltransferase (WSD1-like) family protein) HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04 Identity = 30/89 (33.71%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TrEMBL
Match: tr|A0A0A0K3V2|A0A0A0K3V2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051340 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.8e-38 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TrEMBL
Match: tr|A0A1S3C1V4|A0A1S3C1V4_CUCME (O-acyltransferase WSD1-like OS=Cucumis melo OX=3656 GN=LOC103495688 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 9.2e-34 Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TrEMBL
Match: tr|A0A072ULU8|A0A072ULU8_MEDTR (O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25485843 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TrEMBL
Match: tr|A0A072UXS2|A0A072UXS2_MEDTR (O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25494442 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G005950.1 vs. TrEMBL
Match: tr|A0A072UNQ0|A0A072UNQ0_MEDTR (O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25494440 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.9e-16 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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