CsaV3_6G019130.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGTGACGTTTTGTGACCGGCAACGCCAAGAAGCTCGAGGAAGTTTGAGCAATATTGGGAAATTCAATTCCTTTTCGTTCTCTCAAGCTTGACTTGACGAAGTTGCAAGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAA ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAA ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAA MCFWSLIQSPDQKFEEFDSKMATRIGLVLPSSRRARRYIEREARLAAIQVNGSVLVEDTCLCFNALKGLPRLLLGAGEIGETQKQASTSVAGGLLHLYLVMLLPLELEKELIHMIIIQL
BLAST of CsaV3_6G019130.1 vs. NCBI nr
Match: KGN47212.1 (hypothetical protein Csa_6G206350 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. NCBI nr
Match: PON63788.1 (Ham1-like protein [Parasponia andersonii]) HSP 1 Score: 62.0 bits (149), Expect = 1.6e-06 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. NCBI nr
Match: XP_020094355.1 (inosine triphosphate pyrophosphatase [Ananas comosus] >XP_020094356.1 inosine triphosphate pyrophosphatase [Ananas comosus] >OAY64599.1 Inosine triphosphate pyrophosphatase [Ananas comosus]) HSP 1 Score: 61.2 bits (147), Expect = 2.7e-06 Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. NCBI nr
Match: XP_024200271.1 (inosine triphosphate pyrophosphatase-like [Rosa chinensis]) HSP 1 Score: 61.2 bits (147), Expect = 2.7e-06 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. NCBI nr
Match: XP_008391436.1 (PREDICTED: inosine triphosphate pyrophosphatase [Malus domestica]) HSP 1 Score: 60.1 bits (144), Expect = 6.0e-06 Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TAIR10
Match: AT4G13720.1 (Inosine triphosphate pyrophosphatase family protein) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08 Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. Swiss-Prot
Match: sp|B6TNW8|ITPA_MAIZE (Inosine triphosphate pyrophosphatase OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.4e-08 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. Swiss-Prot
Match: sp|F6HS55|ITPA_VITVI (Inosine triphosphate pyrophosphatase OS=Vitis vinifera OX=29760 GN=VIT_05s0051g00580 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.7e-08 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. Swiss-Prot
Match: sp|Q8L968|ITPA_ARATH (Inosine triphosphate pyrophosphatase OS=Arabidopsis thaliana OX=3702 GN=At4g13720 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-07 Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. Swiss-Prot
Match: sp|B8BH95|ITPA_ORYSI (Inosine triphosphate pyrophosphatase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_33887 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-07 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. Swiss-Prot
Match: sp|Q7XDP2|ITPA_ORYSJ (Inosine triphosphate pyrophosphatase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0457500 PE=2 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-07 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TrEMBL
Match: tr|A0A0A0KFK7|A0A0A0KFK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G206350 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 7.7e-58 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TrEMBL
Match: tr|A0A2P5CRV4|A0A2P5CRV4_PARAD (Ham1-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_129440 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TrEMBL
Match: tr|A0A199UIN7|A0A199UIN7_ANACO (Inosine triphosphate pyrophosphatase OS=Ananas comosus OX=4615 GN=ACMD2_01920 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06 Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TrEMBL
Match: tr|A0A2P5VNT4|A0A2P5VNT4_GOSBA (Inosine triphosphate pyrophosphatase OS=Gossypium barbadense OX=3634 GN=GOBAR_AA40213 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06 Identity = 37/67 (55.22%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of CsaV3_6G019130.1 vs. TrEMBL
Match: tr|A0A2P6QRZ6|A0A2P6QRZ6_ROSCH (Inosine triphosphate pyrophosphatase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0396911 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.2e-06 Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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