CsaV3_6G012440.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCATCTTACAAAATTCCTCATCAGACCATTATACTACTAGTACTAAGAGTCCCTCCTTCTCGACACCTAGTGCGATAAGACTACAAGAACAAGGAAAGCGGAAGATGATGGAGAAGGCCGAGGTAGAAAATATGGGGAAAAAAATAATATGTAGGGAGAAGGCAGAAGAAAGTGAAAAGATATACAGGAATAAAAGATTATGTAACAAGAAGAGGAAAAGAAGAAGAAAGAACAGGCGAAACAGCCAAGCTAGGAAGAAAGATATTGAGCTTTCAATGGAAAGCACTTCTTCACCTAATGTTGATTTTACAAAATTAGCAACAAGGACCCCCGCAAGATCTGCCAAAGAAATTTGGGCCCTTAGAAGAAGAAGCGAAGAAAGAGAGTGA ATGCTCATCTTACAAAATTCCTCATCAGACCATTATACTACTAGTACTAAGAGTCCCTCCTTCTCGACACCTAGTGCGATAAGACTACAAGAACAAGGAAAGCGGAAGATGATGGAGAAGGCCGAGGTAGAAAATATGGGGAAAAAAATAATATGTAGGGAGAAGGCAGAAGAAAGTGAAAAGATATACAGGAATAAAAGATTATGTAACAAGAAGAGGAAAAGAAGAAGAAAGAACAGGCGAAACAGCCAAGCTAGGAAGAAAGATATTGAGCTTTCAATGGAAAGCACTTCTTCACCTAATGTTGATTTTACAAAATTAGCAACAAGGACCCCCGCAAGATCTGCCAAAGAAATTTGGGCCCTTAGAAGAAGAAGCGAAGAAAGAGAGTGA ATGCTCATCTTACAAAATTCCTCATCAGACCATTATACTACTAGTACTAAGAGTCCCTCCTTCTCGACACCTAGTGCGATAAGACTACAAGAACAAGGAAAGCGGAAGATGATGGAGAAGGCCGAGGTAGAAAATATGGGGAAAAAAATAATATGTAGGGAGAAGGCAGAAGAAAGTGAAAAGATATACAGGAATAAAAGATTATGTAACAAGAAGAGGAAAAGAAGAAGAAAGAACAGGCGAAACAGCCAAGCTAGGAAGAAAGATATTGAGCTTTCAATGGAAAGCACTTCTTCACCTAATGTTGATTTTACAAAATTAGCAACAAGGACCCCCGCAAGATCTGCCAAAGAAATTTGGGCCCTTAGAAGAAGAAGCGAAGAAAGAGAGTGA MLILQNSSSDHYTTSTKSPSFSTPSAIRLQEQGKRKMMEKAEVENMGKKIICREKAEESEKIYRNKRLCNKKRKRRRKNRRNSQARKKDIELSMESTSSPNVDFTKLATRTPARSAKEIWALRRRSEERE
BLAST of CsaV3_6G012440.1 vs. NCBI nr
Match: KGN46686.1 (hypothetical protein Csa_6G124010 [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012440.1 vs. NCBI nr
Match: KGN57939.1 (hypothetical protein Csa_3G399460 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of CsaV3_6G012440.1 vs. TrEMBL
Match: tr|A0A0A0KG13|A0A0A0KG13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124010 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012440.1 vs. TrEMBL
Match: tr|A0A0A0LAF6|A0A0A0LAF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G399460 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-12 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of CsaV3_6G012440.1 vs. TrEMBL
Match: tr|A0A0A0L7Q4|A0A0A0L7Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417670 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.1e-04 Identity = 42/116 (36.21%), Postives = 52/116 (44.83%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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