CsaV3_4G027620.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAACTCAGAAGCTCTTTATTGTTTCCATGCTGGTCGCGGTCACATTTTCCTGTTTTGCTTCATCGAGTATTATTCTCTATCATTGAACTATTGTAATTTCGTAATGTAATTTTTTGTTTGTTTGTTATTTTAAAGTTAAAGAAGTATTTATTAAATGCTAATTCTTTGTCACATGGCAGTGGAGGGAGATGATCTATGGAATTGTGTTATACCATGTTCGAACAACAACGGAGATATTTTGTGTAATACTGCATGCATCGAACAAGACGAAGGCGCTGGATTTTGTGTTCCCAAGTTACCTGGCATTTCTGATATGAAAGTTTGTTGTTGCAACAATGGACGATGA ATGGTAACTCAGAAGCTCTTTATTGTTTCCATGCTGGTCGCGGTCACATTTTCCTGTTTTGCTTCATCGATGGAGGGAGATGATCTATGGAATTGTGTTATACCATGTTCGAACAACAACGGAGATATTTTGTGTAATACTGCATGCATCGAACAAGACGAAGGCGCTGGATTTTGTGTTCCCAAGTTACCTGGCATTTCTGATATGAAAGTTTGTTGTTGCAACAATGGACGATGA ATGGTAACTCAGAAGCTCTTTATTGTTTCCATGCTGGTCGCGGTCACATTTTCCTGTTTTGCTTCATCGATGGAGGGAGATGATCTATGGAATTGTGTTATACCATGTTCGAACAACAACGGAGATATTTTGTGTAATACTGCATGCATCGAACAAGACGAAGGCGCTGGATTTTGTGTTCCCAAGTTACCTGGCATTTCTGATATGAAAGTTTGTTGTTGCAACAATGGACGATGA MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCVPKLPGISDMKVCCCNNGR
BLAST of CsaV3_4G027620.1 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_4G339000 [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_2G071930 [Cucumis sativus]) HSP 1 Score: 73.2 bits (178), Expect = 4.5e-10 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. NCBI nr
Match: KGN61229.1 (hypothetical protein Csa_2G072430 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 5.0e-09 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. NCBI nr
Match: KGN61227.1 (hypothetical protein Csa_2G070930 [Cucumis sativus]) HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04 Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. TrEMBL
Match: tr|A0A0A0L1R8|A0A0A0L1R8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. TrEMBL
Match: tr|A0A0A0LHG9|A0A0A0LHG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.0e-10 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. TrEMBL
Match: tr|A0A0A0LJG5|A0A0A0LJG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-09 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of CsaV3_4G027620.1 vs. TrEMBL
Match: tr|A0A0A0LKF5|A0A0A0LKF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-04 Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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