CsaV3_4G002990.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G002990.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ATP-dependent tryptophan/phenylalanine/tyrosine adenylase
Location	chr4 : 1850180 .. 1852493 (+)
Sequence length	720

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATTTTATTTATTGATAAGTAAGACTTTCTAAAATACAATAAACTTTCAATGGTATATATTACATATTCATAAACTTTCAATTCAAAATACACAAATATTCAACATTATTTTACACAAGGAAAAGTGCTTATTTACATTTTTATTTTCGATTTATGATATATTCATTTGTTACACTTATATTATGGAAATATAAATGTCTAGCTGGAAATTTAAAACCACAACTAAATTTGCAATTTAATCTAAAAATTACCATAATTATTTTTAGAAAACAAAATTAGTTTTTACATAAGTTATTAAAATATATATATATTAAAGAAATAGAAATGGGAGTAATAATAAATAAACAAAAGTTTATTTATAAGCATAAAAGGAAAAAAGAAAAAAGAGAAATAATAGAAATCACTCTCTGTTTTCTCCTCATTCTTCTCTGAAAAGCTCCAATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAAATTATTCTTATTGAATTTCAAAAATTTTCCGCGTCCCAAAAATTATAATAATTTATATATATATATATATATGTTATTTATTATATTTTTTCGCACCCCATCGCATGCTATTAATTAAATCTCAAGGTCTTCTCTCTTTTTTCTCAATGCAATTATTTTGAAATTCCAATGGTTTTATTCACTCTCTCTCTCTCTCTTTTTGGGAAAAATCTTTTGAACAATCACTACACTACACTACATGTTTAAATGAGTTAAGAATGTAGCGATGTAGTGATGGTTCTTCATAATCTTCAGTTCATTTTTTCTTCAATTTTAAAATTTTGGATTAACTTAAGATTGATTAAAGACGGAATTATGAGACAACGGAATGTATTGATTTTAATTAAAGTCCATAGTGTATAGTGTAGTGATTTAAGGAAAGTTTTGTTCTATTGATTGTCACCTCACCCACATTGCATCCCAAAACATATAAGAATTATTTATGACACAAATAAAATTTACCATAGCAAGAACTCAACTACTTACTAGAGTACTAGCGTACTACCTCCTCTTTTTTTTCCTTTCTTTTCTGAATGATTAACTAACAAACCAAAGCATCTCTCAAACAAAATAATCCCTAGTGTTTGCTAACTATCTTTCCTTTTTTTTTTTTTTAACTATAAATTTGTGTGGTACACTTGATTATCATCAATAATCACATGTGAGGTCGCAAGTGTTATAGAGTGTTTGGTAATTTTAGTCAAATGACTTGGAGGATGACTTCGACTTATCTCCAACATACTAAGACTCATTGGGTGTAGGACTCAATCACGGGACCAAATACTTAGAAGTTGAAGATGGCAAACCTTTAAGTAGTCGACTCTTCATTTTTTTTTTTTGGAACAAGTTGGTGGATATGATAAGAAAAAGGGAGGATGATAATGAGCATTAATGAATCGGCCCACAAGAGAACATTGTCATAATCCTTTTGTCCTTATCAATGATATCATAAGATGAAATCACCACACACACACCCCATCCATTAACATACTTTGTGGTTCAAAACTTGATTTGGTTATGAAAACTATCCTAAACCAAATGATTATCCAACAGTTTCTTAAATTCGTTCTATTACCTTATTTAAAATTAGTTAACTTTGGACACATTGTAG

mRNA sequence

ATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAA

Coding sequence (CDS)

ATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAA

Protein sequence

MEIKHKAKIHPSPPPSSSSSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSATRVSRKKSTKKPPINTGNSNVVTTTTTTTNTTYHKTPLFSCDCFYCYTAYWCRWDSSPNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDVPLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL

Homology

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BLAST of CsaV3_4G002990.1 vs. NCBI nr
Match: XP_011654323.1 (PREDICTED: uncharacterized protein LOC105435337 [Cucumis sativus] >KGN53040.1 hypothetical protein Csa_4G012360 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60
           MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA
Sbjct: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60

Query: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120
           TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR
Sbjct: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120

Query: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV 180
           ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV
Sbjct: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV 180

Query: 181 PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL 240
           PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL
Sbjct: 181 PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL 239

[Close]

BLAST of CsaV3_4G002990.1 vs. NCBI nr
Match: XP_008454020.1 (PREDICTED: uncharacterized protein LOC103494567 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98
Identity = 218/242 (90.08%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60
           MEIKHKAKIHPSPP     SVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSA  ++
Sbjct: 1   MEIKHKAKIHPSPPPSSSSSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSALITS 60

Query: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120
           TRVSR   XXXXXXXXXXXXXXXXXXXXXXXXXX TPLFSCDCFYCYTAYWCRWDSSPNR
Sbjct: 61  TRVSR-KKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLFSCDCFYCYTAYWCRWDSSPNR 120

Query: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGS---TDNKTLPVVHCPTSVNDEC 180
           ELIHQAIEAFEDHLTNGEKPKKN GRGKRRDRIGRQGS    +NKTLPV+HCPTSV DEC
Sbjct: 121 ELIHQAIEAFEDHLTNGEKPKKNNGRGKRRDRIGRQGSISTDNNKTLPVIHCPTSVADEC 180

Query: 181 VDVPLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP 240
           VDV LSPVVEDEGS+VKEVEE+GPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP
Sbjct: 181 VDVALSPVVEDEGSMVKEVEENGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP 240

[Close]

BLAST of CsaV3_4G002990.1 vs. NCBI nr
Match: XP_022955886.1 (uncharacterized protein LOC111457737 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 1.4e-75
Identity = 168/251 (66.93%), Postives = 180/251 (71.71%), Query Frame = 0


Query: 1   MEIKHKAKIHPSP---PXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAF 60
           MEIKHK K+HPSP   P     SVFKLLPAAILAL S+LSLD+REVLAYMIARSIQSSA 
Sbjct: 1   MEIKHKGKVHPSPSSSPPSSSSSVFKLLPAAILALVSVLSLDEREVLAYMIARSIQSSAV 60

Query: 61  TSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSS 120
           TS T  SR                             KTP+FSCDCFYCYTAYWCRWDSS
Sbjct: 61  TS-THDSR--------KKSAKKASINGGNSNVSTSYHKTPVFSCDCFYCYTAYWCRWDSS 120

Query: 121 PNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDEC 180
           PNRELIHQAIEAFEDHLT+GEKPKKNTG+GKRRDRI RQ +  +K+LPVV  PT V DEC
Sbjct: 121 PNRELIHQAIEAFEDHLTSGEKPKKNTGKGKRRDRISRQAT--DKSLPVVQRPTPVVDEC 180

Query: 181 VDVPLSP---------VVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFN 240
           V VPLSP         + E +GS VKEV ESGP  E    G+HQKGLATKVLPDVLGFFN
Sbjct: 181 VVVPLSPERQSAAASVLEETKGSPVKEVGESGPGKE--VDGDHQKGLATKVLPDVLGFFN 238

[Close]

BLAST of CsaV3_4G002990.1 vs. NCBI nr
Match: XP_022979917.1 (uncharacterized protein LOC111479467 [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74
Identity = 166/251 (66.14%), Postives = 179/251 (71.31%), Query Frame = 0


Query: 1   MEIKHKAKIHPSP---PXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAF 60
           MEIKHK K+HPSP   P     SVFKLLPAAILAL S+LSLD+REVLAYMIARSIQSSA 
Sbjct: 1   MEIKHKGKVHPSPSSSPPSSSSSVFKLLPAAILALVSVLSLDEREVLAYMIARSIQSSAV 60

Query: 61  TSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSS 120
           TS T  SR                             KTP+FSCDCFYCYTAYWCRWDSS
Sbjct: 61  TS-THDSR--------KKSAKKASINGGNSNVSTGYHKTPMFSCDCFYCYTAYWCRWDSS 120

Query: 121 PNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDEC 180
           PNRELIHQAIEAFEDHLT+GEKPKKNTG+GKRRDRIGRQ +  +K+LPVV  P  V  EC
Sbjct: 121 PNRELIHQAIEAFEDHLTSGEKPKKNTGKGKRRDRIGRQAT--DKSLPVVQRPPPVAVEC 180

Query: 181 VDVPLSP---------VVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFN 240
           V VP+SP         + E +GS VKEV ESGP  E    G+HQKGLATKVLPDVLGFFN
Sbjct: 181 VVVPISPERQSAVASVLEETKGSPVKEVGESGPGKE--VDGDHQKGLATKVLPDVLGFFN 238

[Close]

BLAST of CsaV3_4G002990.1 vs. NCBI nr
Match: XP_023528171.1 (uncharacterized protein LOC111791162 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 8.2e-71
Identity = 164/245 (66.94%), Postives = 178/245 (72.65%), Query Frame = 0


Query: 1   MEIKHKAKIHPSP---PXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAF 60
           MEIKHK K+HPSP   PXXXX SVFKLLPAAILAL ++LSLD+REVLAYMIARSIQSSA 
Sbjct: 1   MEIKHKGKVHPSPSSSPXXXXSSVFKLLPAAILALVAVLSLDEREVLAYMIARSIQSSAV 60

Query: 61  TSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSS 120
           TS T  SR                             KTP+FSCDCFYCYTAYWCRWDSS
Sbjct: 61  TS-THDSR--------KKSAKKASISGGNSNVSTGYHKTPMFSCDCFYCYTAYWCRWDSS 120

Query: 121 PNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDEC 180
           PNRELIHQAIEAFEDHLT+GEKPKKNTG+GKRRDRIGRQ +  +K+LPVV  P  + DEC
Sbjct: 121 PNRELIHQAIEAFEDHLTSGEKPKKNTGKGKRRDRIGRQAT--DKSLPVVQRPPPMADEC 180

Query: 181 VDVPLSP---------VVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFN 234
           V VPLSP         + E +GS VKEV ESGP  E    G+HQKGLATKVLPDVLGFFN
Sbjct: 181 VVVPLSPERQSAAASVLEETKGSPVKEVGESGPGKE--VDGDHQKGLATKVLPDVLGFFN 232

[Close]

BLAST of CsaV3_4G002990.1 vs. TAIR10
Match: AT1G24270.1 (unknown protein)

HSP 1 Score: 107.8 bits (268), Expect = 9.2e-24
Identity = 67/162 (41.36%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 1   MEIKHKAKIHPSPP--------XXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSI 60
           M++  K K+HPSPP             SVFKLL +AIL L S+LS +D EVLAY+I RS+
Sbjct: 55  MKVMKKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSL 114

Query: 61  QSSAFTSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWC 120
            ++   S  +                                K PL  C CF CYT+YW 
Sbjct: 115 NTTNVVSCKK----------------------------KRSHKAPLLDCQCFDCYTSYWS 174

Query: 121 RWDSSPNRELIHQAIEAFEDHLTNGE-----KPKKNTGRGKR 150
           +WDSS NRELI+Q IEAFEDHLT  E       KKN  R K+
Sbjct: 175 KWDSSSNRELINQIIEAFEDHLTRDEISASHTSKKNKKRAKK 188

[Close]

BLAST of CsaV3_4G002990.1 vs. TAIR10
Match: AT5G13090.1 (unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21
Identity = 66/175 (37.71%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 95  KTPLFSCDCFYCYTAYWCRWDSSPNRELIHQAIEAFEDHLTNGEK---PKKNTGRGKRRD 154
           K P+F C+CF CYT YW RWDSSPNRELIH+ IEAFE+H  +GE+    +  + RGK+++
Sbjct: 96  KPPVFDCECFDCYTNYWFRWDSSPNRELIHEIIEAFENH--HGEENSASRSKSKRGKKKE 155

Query: 155 RIGRQ-GSTDNKTLPVVHCPTSVNDECVDVPLSPVVEDEGSVVK--------EVEESGPV 214
           + GR+   +D                 V  P++     E S V         EV E  P 
Sbjct: 156 KPGRRVTDSDXXXXXXXXXXXXXXXXPVVEPMNETTVSESSHVSSPVRLSEAEVAEGEPE 215

Query: 215 VEDVGGGEH-------------------QKGLATKVLPDVLGFFNSRLWSLWSPN 239
            E                           KGLA KVLPDVLG F+S  W LW+PN
Sbjct: 216 DEXXXXXXXXXXXXXXXXXXXXXSNVTGHKGLARKVLPDVLGLFHSNFWRLWNPN 268

[Close]

BLAST of CsaV3_4G002990.1 vs. TAIR10
Match: AT1G12020.1 (unknown protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20
Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 0


Query: 2   EIKHKAKIHPSPPXXXXXS-VFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 61
           ++  K  +HPSPP       +  LLP AI +LA++LS +DREVLAY+I+ +  S      
Sbjct: 3   KLYRKGTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTASYSGERNPT 62

Query: 62  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 121
           +R+++                              +PLF CDCF CYT+YW RWDSSP+R
Sbjct: 63  SRLNK------------------TKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSR 118

Query: 122 ELIHQAIEAFEDHL 135
           +LIH+ I+AFED L
Sbjct: 123 QLIHEIIDAFEDSL 118

[Close]

BLAST of CsaV3_4G002990.1 vs. TAIR10
Match: AT1G62422.1 (unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 6   KAKIHPSPP--XXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSATRV 65
           K  +HPSPP           LLP AIL+L + LS++DREVLAY+I+ S  S+      R+
Sbjct: 7   KGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISNSGDSN------RI 66

Query: 66  SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNRELI 125
           SR                              +PLF CDCF CYT+YW RWD+SP R+LI
Sbjct: 67  SR--------------------LKKNKEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLI 111

Query: 126 HQAIEAFEDHL 135
           H+ I+A+ED L
Sbjct: 127 HEIIDAYEDSL 111

[Close]

BLAST of CsaV3_4G002990.1 vs. TrEMBL
Match: tr|A0A0A0KTW2|A0A0A0KTW2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012360 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 8.6e-109
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60
           MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA
Sbjct: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60

Query: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120
           TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR
Sbjct: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120

Query: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV 180
           ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV
Sbjct: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDV 180

Query: 181 PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL 240
           PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL
Sbjct: 181 PLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL 239

[Close]

BLAST of CsaV3_4G002990.1 vs. TrEMBL
Match: tr|A0A1S3BXS0|A0A1S3BXS0_CUCME (uncharacterized protein LOC103494567 OS=Cucumis melo OX=3656 GN=LOC103494567 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 218/242 (90.08%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MEIKHKAKIHPSPPXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSA 60
           MEIKHKAKIHPSPP     SVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSA  ++
Sbjct: 1   MEIKHKAKIHPSPPPSSSSSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSALITS 60

Query: 61  TRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNR 120
           TRVSR   XXXXXXXXXXXXXXXXXXXXXXXXXX TPLFSCDCFYCYTAYWCRWDSSPNR
Sbjct: 61  TRVSR-KKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLFSCDCFYCYTAYWCRWDSSPNR 120

Query: 121 ELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGS---TDNKTLPVVHCPTSVNDEC 180
           ELIHQAIEAFEDHLTNGEKPKKN GRGKRRDRIGRQGS    +NKTLPV+HCPTSV DEC
Sbjct: 121 ELIHQAIEAFEDHLTNGEKPKKNNGRGKRRDRIGRQGSISTDNNKTLPVIHCPTSVADEC 180

Query: 181 VDVPLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP 240
           VDV LSPVVEDEGS+VKEVEE+GPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP
Sbjct: 181 VDVALSPVVEDEGSMVKEVEENGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSP 240

[Close]

BLAST of CsaV3_4G002990.1 vs. TrEMBL
Match: tr|A0A1R3FZ04|A0A1R3FZ04_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_30036 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 137/275 (49.82%), Postives = 159/275 (57.82%), Query Frame = 0


Query: 1   MEIKHKAKIHPSP---PXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAF 60
           M++K+K K+HPSP         S+ KLLPAAILALAS+LSL+DREVLAYMI RS++    
Sbjct: 1   MKLKNKGKVHPSPSSSSSEDYLSILKLLPAAILALASVLSLEDREVLAYMITRSLKXXXX 60

Query: 61  TSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSS 120
                   XXXXXXXXXXXXXXXXXXX          K PLF CDCF CYT+YW RWDSS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXLSQKTGALAHKPPLFDCDCFDCYTSYWFRWDSS 120

Query: 121 PNRELIHQAIEAFEDHLTNGE--KPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCP----- 180
            NRELIHQ IEAFEDHLTNGE  KP K   R KRRD   +  S      PVV  P     
Sbjct: 121 SNRELIHQVIEAFEDHLTNGEAQKPSKKNARPKRRDSNSKTAS-QVPVSPVVELPGQPDL 180

Query: 181 -------TSVNDECVDV------PLSPVVEDEGSVVKEVEESGPVVEDV----------- 240
                  +S+ +  V V      P    +++E + V E+ E  PV +D            
Sbjct: 181 GKVIVLESSIEEAPVFVVVDDVTPAEKAIKEEVAGVAEMTEGFPVKDDAEVERPATAAAL 240

[Close]

BLAST of CsaV3_4G002990.1 vs. TrEMBL
Match: tr|A0A2P6R0D6|A0A2P6R0D6_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429791 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 127/246 (51.63%), Postives = 154/246 (62.60%), Query Frame = 0


Query: 20  SVFKLLPAAILALASLLSLDDREVLAYMIARSIQ---SSAFTSATRVSRXXXXXXXXXXX 79
           SV +LLPAAILALA++LSL+DREVLAYMI RS++   S +F+  T+ S+          X
Sbjct: 31  SVLQLLPAAILALATVLSLEDREVLAYMITRSMKTAPSFSFSDTTQDSK--------KKX 90

Query: 80  XXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYWCRWDSSPNRELIHQAIEAFEDHLTN 139
           XXXXXX            + P+F C+CF CY +YW +WDSSPNRELIHQAIEAFEDHL +
Sbjct: 91  XXXXXXKAGRTESQSNNHQPPMFDCECFDCYRSYWFKWDSSPNRELIHQAIEAFEDHLAH 150

Query: 140 GEKPKKNTGRGKRRDRIGR---QGSTDNKTLPVV-----HCPTSVNDECVDVPLSPVVED 199
           GE+PKKN GRGKRRD++GR   Q S DN +   V     +  +SV +  V +PL  VV  
Sbjct: 151 GERPKKNAGRGKRRDKMGRREAQKSADNSSKDEVFVAEENVVSSVAE--VVLPLCDVV-S 210

Query: 200 EGSVVK----EVEESGPVV------EDV------GGGEHQKGLATKVLPDVLGFFNSRLW 239
            GS  K    EVEE    V      +DV          + KGLA KVLPDVLG FNSRLW
Sbjct: 211 VGSPEKVEELEVEEQAVEVKTETTADDVALVVRAAAVSNHKGLARKVLPDVLGLFNSRLW 265

[Close]

BLAST of CsaV3_4G002990.1 vs. TrEMBL
Match: tr|A0A1Q3CUP7|A0A1Q3CUP7_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_27421 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.4e-41
Identity = 148/264 (56.06%), Postives = 169/264 (64.02%), Query Frame = 0


Query: 1   MEIKHKAKIHPSP---------PXXXXXSVFKLLPAAILALASLLSLDDREVLAYMIARS 60
           M+IK+K K++PSP         P     SV  LLPAAIL LAS+LSL+DREVLAY+I RS
Sbjct: 4   MKIKNKGKVYPSPSSSSPLSFSPNGDYLSVLNLLPAAILVLASVLSLEDREVLAYLITRS 63

Query: 61  IQSSAFTSATRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTPLFSCDCFYCYTAYW 120
           I+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +F CDCF CYT+YW
Sbjct: 64  IK-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFDCDCFDCYTSYW 123

Query: 121 CRWDSSPNRELIHQAIEAFEDHLTNGEKPK-KNTGRGKRRDRIGRQGSTDNK-------- 180
            RWDSSPNRELIHQAIEAFEDHLTNGE  K K T R KRRD+ GR+   D          
Sbjct: 124 YRWDSSPNRELIHQAIEAFEDHLTNGESEKSKKTTRTKRRDKSGRRVVVDTPRCASCQPV 183

Query: 181 -TLPVVHCPTSVNDECVDVPLSPV---VEDEGSVVKEVEESGPVVED---VGGGEHQKGL 240
             +P+    +S  +   + P S     V   GS  +  EE  PV E+        + KGL
Sbjct: 184 LIMPLFDAGSSTTETDHEEPSSSTFAYVSPLGSPERVNEEVVPVDEEDMLAAAVSNHKGL 243

The following BLAST results are available for this feature:

BLAST of CsaV3_4G002990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654323.1	1.3e-108	100.00	PREDICTED: uncharacterized protein LOC105435337 [Cucumis sativus] >KGN53040.1 hy...	[more]
XP_008454020.1	2.1e-98	90.08	PREDICTED: uncharacterized protein LOC103494567 [Cucumis melo]	[more]
XP_022955886.1	1.4e-75	66.93	uncharacterized protein LOC111457737 [Cucurbita moschata]	[more]
XP_022979917.1	1.6e-74	66.14	uncharacterized protein LOC111479467 [Cucurbita maxima]	[more]
XP_023528171.1	8.2e-71	66.94	uncharacterized protein LOC111791162 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_4G002990.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24270.1	9.2e-24	41.36	unknown protein	[more]
AT5G13090.1	5.6e-21	37.71	unknown protein	[more]
AT1G12020.1	1.6e-20	39.55	unknown protein	[more]
AT1G62422.1	1.8e-19	41.22	unknown protein	[more]

BLAST of CsaV3_4G002990.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G002990.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTW2\|A0A0A0KTW2_CUCSA	8.6e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012360 PE=4 SV=1	[more]
tr\|A0A1S3BXS0\|A0A1S3BXS0_CUCME	1.4e-98	90.08	uncharacterized protein LOC103494567 OS=Cucumis melo OX=3656 GN=LOC103494567 PE=...	[more]
tr\|A0A1R3FZ04\|A0A1R3FZ04_COCAP	2.0e-41	49.82	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_30036 PE=4 ...	[more]
tr\|A0A2P6R0D6\|A0A2P6R0D6_ROSCH	2.6e-41	51.63	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429791 PE=4...	[more]
tr\|A0A1Q3CUP7\|A0A1Q3CUP7_CEPFO	3.4e-41	56.06	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G002990	CsaV3_4G002990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G002990.1.exon1	CsaV3_4G002990.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G002990.1.cds1	CsaV3_4G002990.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G002990.1	CsaV3_4G002990.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	PANTHER	PTHR31903:SF4	SUBFAMILY NOT NAMED	coord: 1..239
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..239