CsaV3_4G002990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATTTTATTTATTGATAAGTAAGACTTTCTAAAATACAATAAACTTTCAATGGTATATATTACATATTCATAAACTTTCAATTCAAAATACACAAATATTCAACATTATTTTACACAAGGAAAAGTGCTTATTTACATTTTTATTTTCGATTTATGATATATTCATTTGTTACACTTATATTATGGAAATATAAATGTCTAGCTGGAAATTTAAAACCACAACTAAATTTGCAATTTAATCTAAAAATTACCATAATTATTTTTAGAAAACAAAATTAGTTTTTACATAAGTTATTAAAATATATATATATTAAAGAAATAGAAATGGGAGTAATAATAAATAAACAAAAGTTTATTTATAAGCATAAAAGGAAAAAAGAAAAAAGAGAAATAATAGAAATCACTCTCTGTTTTCTCCTCATTCTTCTCTGAAAAGCTCCAATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAAATTATTCTTATTGAATTTCAAAAATTTTCCGCGTCCCAAAAATTATAATAATTTATATATATATATATATATGTTATTTATTATATTTTTTCGCACCCCATCGCATGCTATTAATTAAATCTCAAGGTCTTCTCTCTTTTTTCTCAATGCAATTATTTTGAAATTCCAATGGTTTTATTCACTCTCTCTCTCTCTCTTTTTGGGAAAAATCTTTTGAACAATCACTACACTACACTACATGTTTAAATGAGTTAAGAATGTAGCGATGTAGTGATGGTTCTTCATAATCTTCAGTTCATTTTTTCTTCAATTTTAAAATTTTGGATTAACTTAAGATTGATTAAAGACGGAATTATGAGACAACGGAATGTATTGATTTTAATTAAAGTCCATAGTGTATAGTGTAGTGATTTAAGGAAAGTTTTGTTCTATTGATTGTCACCTCACCCACATTGCATCCCAAAACATATAAGAATTATTTATGACACAAATAAAATTTACCATAGCAAGAACTCAACTACTTACTAGAGTACTAGCGTACTACCTCCTCTTTTTTTTCCTTTCTTTTCTGAATGATTAACTAACAAACCAAAGCATCTCTCAAACAAAATAATCCCTAGTGTTTGCTAACTATCTTTCCTTTTTTTTTTTTTTAACTATAAATTTGTGTGGTACACTTGATTATCATCAATAATCACATGTGAGGTCGCAAGTGTTATAGAGTGTTTGGTAATTTTAGTCAAATGACTTGGAGGATGACTTCGACTTATCTCCAACATACTAAGACTCATTGGGTGTAGGACTCAATCACGGGACCAAATACTTAGAAGTTGAAGATGGCAAACCTTTAAGTAGTCGACTCTTCATTTTTTTTTTTTGGAACAAGTTGGTGGATATGATAAGAAAAAGGGAGGATGATAATGAGCATTAATGAATCGGCCCACAAGAGAACATTGTCATAATCCTTTTGTCCTTATCAATGATATCATAAGATGAAATCACCACACACACACCCCATCCATTAACATACTTTGTGGTTCAAAACTTGATTTGGTTATGAAAACTATCCTAAACCAAATGATTATCCAACAGTTTCTTAAATTCGTTCTATTACCTTATTTAAAATTAGTTAACTTTGGACACATTGTAG ATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAA ATGGAGATTAAGCACAAAGCTAAAATTCACCCATCGCCGCCTCCCTCCTCTTCCTCCTCCGTCTTCAAGCTTCTACCAGCCGCTATCTTAGCCTTAGCTTCACTCCTCTCTCTCGACGACCGTGAAGTCCTTGCTTACATGATCGCCAGGTCCATTCAATCCTCTGCATTCACTTCCGCCACTCGCGTTTCCAGGAAGAAATCCACCAAAAAACCACCAATCAATACCGGAAACAGTAATGTTGTTACTACTACTACTACTACGACTAATACTACTTATCATAAAACTCCTTTGTTTAGTTGCGATTGCTTCTACTGCTACACTGCCTACTGGTGCCGCTGGGACTCCTCTCCCAATCGCGAACTAATCCACCAAGCCATCGAGGCGTTTGAAGATCATTTAACCAACGGTGAGAAGCCGAAGAAGAATACCGGTAGAGGAAAGAGAAGAGATAGAATCGGGCGTCAAGGTAGTACTGATAATAAGACTCTACCTGTTGTTCATTGTCCAACGTCGGTTAACGATGAGTGCGTCGACGTTCCATTATCGCCGGTGGTGGAAGATGAAGGAAGTGTGGTGAAGGAAGTTGAAGAGAGTGGTCCGGTGGTGGAAGATGTAGGCGGCGGGGAGCATCAGAAGGGTTTGGCGACGAAGGTACTACCGGACGTGTTGGGGTTTTTTAATTCGCGTTTATGGAGTCTGTGGAGTCCGAATCTTTAA MEIKHKAKIHPSPPPSSSSSVFKLLPAAILALASLLSLDDREVLAYMIARSIQSSAFTSATRVSRKKSTKKPPINTGNSNVVTTTTTTTNTTYHKTPLFSCDCFYCYTAYWCRWDSSPNRELIHQAIEAFEDHLTNGEKPKKNTGRGKRRDRIGRQGSTDNKTLPVVHCPTSVNDECVDVPLSPVVEDEGSVVKEVEESGPVVEDVGGGEHQKGLATKVLPDVLGFFNSRLWSLWSPNL
BLAST of CsaV3_4G002990 vs. NCBI nr
Match: XP_011654323.1 (PREDICTED: uncharacterized protein LOC105435337 [Cucumis sativus] >KGN53040.1 hypothetical protein Csa_4G012360 [Cucumis sativus]) HSP 1 Score: 402.1 bits (1032), Expect = 1.3e-108 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. NCBI nr
Match: XP_008454020.1 (PREDICTED: uncharacterized protein LOC103494567 [Cucumis melo]) HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98 Identity = 218/242 (90.08%), Postives = 224/242 (92.56%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. NCBI nr
Match: XP_022955886.1 (uncharacterized protein LOC111457737 [Cucurbita moschata]) HSP 1 Score: 292.4 bits (747), Expect = 1.4e-75 Identity = 168/251 (66.93%), Postives = 180/251 (71.71%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. NCBI nr
Match: XP_022979917.1 (uncharacterized protein LOC111479467 [Cucurbita maxima]) HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74 Identity = 166/251 (66.14%), Postives = 179/251 (71.31%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. NCBI nr
Match: XP_023528171.1 (uncharacterized protein LOC111791162 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.6 bits (706), Expect = 8.2e-71 Identity = 164/245 (66.94%), Postives = 178/245 (72.65%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TAIR10
Match: AT1G24270.1 (unknown protein) HSP 1 Score: 107.8 bits (268), Expect = 9.2e-24 Identity = 67/162 (41.36%), Postives = 82/162 (50.62%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TAIR10
Match: AT5G13090.1 (unknown protein) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21 Identity = 66/175 (37.71%), Postives = 84/175 (48.00%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TAIR10
Match: AT1G12020.1 (unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 1.6e-20 Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TAIR10
Match: AT1G62422.1 (unknown protein) HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19 Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TrEMBL
Match: tr|A0A0A0KTW2|A0A0A0KTW2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012360 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 8.6e-109 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TrEMBL
Match: tr|A0A1S3BXS0|A0A1S3BXS0_CUCME (uncharacterized protein LOC103494567 OS=Cucumis melo OX=3656 GN=LOC103494567 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98 Identity = 218/242 (90.08%), Postives = 224/242 (92.56%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TrEMBL
Match: tr|A0A1R3FZ04|A0A1R3FZ04_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_30036 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41 Identity = 137/275 (49.82%), Postives = 159/275 (57.82%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TrEMBL
Match: tr|A0A2P6R0D6|A0A2P6R0D6_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429791 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41 Identity = 127/246 (51.63%), Postives = 154/246 (62.60%), Query Frame = 0
BLAST of CsaV3_4G002990 vs. TrEMBL
Match: tr|A0A1Q3CUP7|A0A1Q3CUP7_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_27421 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.4e-41 Identity = 148/264 (56.06%), Postives = 169/264 (64.02%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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