CsaV3_2G035780.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAGACGATCAGGGAGAAGAGAGATGGCTTGCTGTGCGAATTGGACCTTTCACATGTCGGTGTTTGACGTCACTACAGTGTGCTCCAAGACTCCCTTGGTCGTCGACGTTGGTTATGCTTTTGTGGCCGAAACGAAATCTAATAGGTAATATCAATTTTCTATATGCATTTAATTTCTCTTTTCTATTTTCTTCAATTTTTCAAAAGGGAACTCATAAATAATTTTTGGCATGCTATGAAGAAAGCATTTTGCTATGTTGAAGAAGATTGTTTTTTTTTTTTTTTTTTGTCTAGGGTCATCTTCCCAATGTGAATCTATATTTTTTCTCCATGGTTGGCTGTGTGATGAAGTAATTTGGTCACTTACAATGTGTTTGATGAAGTTCTTTAGTGAAGCATTTGGTTGATTTTTGTTTGCTCGAATTAGGAAAATAGTCTAGGAAGATTCCATGGCTATGGGAGGAAGCTTTGAGAAAAAGAGAATGAAAAATTAATTATGAGATTTTTAACTTTGATGTTGATATAAGTTGGGATGAGTTTAAAGGGGCATTCTTTGATAGTTTTATCTGCACTCTTTCCATGATGAAAAACGAAGTGAGTTCTTGAAGCTCACTCAGAGTTCAATGACTGTTGTTGAATATGAGAAGAAGTATACAAAATTGTCTAAGTACGCCACCAGTTTGATTGAGGATGAGGCTAAAAGGTGCAAGCGATTTGAAGAGGGATTACGAGAGAAAATCCGTACTCCCATGAGTAGGATAGATTTGGACATAAGCTTAAATGCAGAACCAACACTATATATAAGATGTACCTATTATACATGTACTAATTCAAAGAAGATATACTCAAGTGCAAGAGCCTCATGA ATGTCGAGACGATCAGGGAGAAGAGAGATGGCTTGCTGTGCGAATTGGACCTTTCACATGTCGGTGTTTGACGTCACTACAGTGTGCTCCAAGACTCCCTTGGTCGTCGACGTTGGTTATGCTTTTGTGGCCGAAACGAAATCTAATAGTGAGTTCTTGAAGCTCACTCAGAGTTCAATGACTGTTGTTGAATATGAGAAGAAGTATACAAAATTGTCTAAGTACGCCACCAGTTTGATTGAGGATGAGGCTAAAAGGTGCAAGCGATTTGAAGAGGGATTACGAGAGAAAATCCGTACTCCCATGAGTAGGATAGATTTGGACATAAGCTTAAATGCAGAACCAACACTATATATAAGATGTACCTATTATACATGTACTAATTCAAAGAAGATATACTCAAGTGCAAGAGCCTCATGA ATGTCGAGACGATCAGGGAGAAGAGAGATGGCTTGCTGTGCGAATTGGACCTTTCACATGTCGGTGTTTGACGTCACTACAGTGTGCTCCAAGACTCCCTTGGTCGTCGACGTTGGTTATGCTTTTGTGGCCGAAACGAAATCTAATAGTGAGTTCTTGAAGCTCACTCAGAGTTCAATGACTGTTGTTGAATATGAGAAGAAGTATACAAAATTGTCTAAGTACGCCACCAGTTTGATTGAGGATGAGGCTAAAAGGTGCAAGCGATTTGAAGAGGGATTACGAGAGAAAATCCGTACTCCCATGAGTAGGATAGATTTGGACATAAGCTTAAATGCAGAACCAACACTATATATAAGATGTACCTATTATACATGTACTAATTCAAAGAAGATATACTCAAGTGCAAGAGCCTCATGA MSRRSGRREMACCANWTFHMSVFDVTTVCSKTPLVVDVGYAFVAETKSNSEFLKLTQSSMTVVEYEKKYTKLSKYATSLIEDEAKRCKRFEEGLREKIRTPMSRIDLDISLNAEPTLYIRCTYYTCTNSKKIYSSARAS
BLAST of CsaV3_2G035780.1 vs. NCBI nr
Match: KGN63332.1 (hypothetical protein Csa_2G429045 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 8.5e-36 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. NCBI nr
Match: XP_011654404.1 (PREDICTED: uncharacterized protein LOC105435385 [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-09 Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. NCBI nr
Match: XP_008464978.1 (PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]) HSP 1 Score: 69.7 bits (169), Expect = 8.9e-09 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. NCBI nr
Match: XP_024036987.1 (uncharacterized protein LOC112096967 [Citrus clementina]) HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. NCBI nr
Match: XP_024036981.1 (uncharacterized protein LOC112096963 [Citrus clementina]) HSP 1 Score: 65.5 bits (158), Expect = 1.7e-07 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. TrEMBL
Match: tr|A0A0A0LR88|A0A0A0LR88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G429045 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. TrEMBL
Match: tr|A0A1S3CMU0|A0A1S3CMU0_CUCME (uncharacterized protein LOC103502718 OS=Cucumis melo OX=3656 GN=LOC103502718 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.9e-09 Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. TrEMBL
Match: tr|A0A0A0KPI9|A0A0A0KPI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G034500 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.2e-07 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. TrEMBL
Match: tr|A0A1S4DV40|A0A1S4DV40_CUCME (uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.2e-07 Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of CsaV3_2G035780.1 vs. TrEMBL
Match: tr|A0A1S3C3Q7|A0A1S3C3Q7_CUCME (uncharacterized protein LOC103496653 OS=Cucumis melo OX=3656 GN=LOC103496653 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.4e-07 Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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