CsaV3_2G007380.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G007380.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 3732265 .. 3732423 (+)
Sequence length159
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAAGAAGTGCTTTTGCATTCTCCCTTGAGGGAGAAACCAAAATGCTGTGATGTGAAAGTTTCTTTGAAGTTTAGTGGGAATATTTGGTTGGAGAGAAACGATAGAATTTTTGGAGACACCGAGAAATCGGATAAGGAGGGTTGGAAGAGGTGA

mRNA sequence

ATGTTGAAAGAAGTGCTTTTGCATTCTCCCTTGAGGGAGAAACCAAAATGCTGTGATGTGAAAGTTTCTTTGAAGTTTAGTGGGAATATTTGGTTGGAGAGAAACGATAGAATTTTTGGAGACACCGAGAAATCGGATAAGGAGGGTTGGAAGAGGTGA

Coding sequence (CDS)

ATGTTGAAAGAAGTGCTTTTGCATTCTCCCTTGAGGGAGAAACCAAAATGCTGTGATGTGAAAGTTTCTTTGAAGTTTAGTGGGAATATTTGGTTGGAGAGAAACGATAGAATTTTTGGAGACACCGAGAAATCGGATAAGGAGGGTTGGAAGAGGTGA

Protein sequence

MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR
Homology
[Close]
BLAST of CsaV3_2G007380.1 vs. NCBI nr
Match: KGN61034.1 (hypothetical protein Csa_2G035340 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR 53
          MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR
Sbjct: 1  MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR 52

[Close]
BLAST of CsaV3_2G007380.1 vs. TrEMBL
Match: tr|A0A0A0LJ26|A0A0A0LJ26_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035340 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.9e-23
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR 53
          MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR
Sbjct: 1  MLKEVLLHSPLREKPKCCDVKVSLKFSGNIWLERNDRIFGDTEKSDKEGWKR 52

The following BLAST results are available for this feature:
BLAST of CsaV3_2G007380.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61034.11.2e-22100.00hypothetical protein Csa_2G035340 [Cucumis sativus][more]
BLAST of CsaV3_2G007380.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G007380.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G007380.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ26|A0A0A0LJ26_CUCSA7.9e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035340 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_2G007380CsaV3_2G007380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G007380.1.exon1CsaV3_2G007380.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G007380.1.cds1CsaV3_2G007380.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_2G007380.1CsaV3_2G007380.1-proteinpolypeptide