CsaV3_2G005040.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGACAGAGAGGAAGGTTGTTGGAATCAAGATGCCACCAAAAATATGACAGACAAAATGGAAGAAAATGAGAAACAGAGAGAGGTCTCCAAGGTATTGATAAGGTATTCACTTATATATCTTCTACTTTTCCATTCCTCAATATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAAAAACAAAAGCAATTTTTTAGAACTTATTTTTTTTAGTTACCAAGAGGACTACTTTTAAATATACCAAAATAAACAAAAATATTTACAAATTTAGAAAACATCATATTGATAGATGTTAATTGACATTGAAA ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVILLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLEILIDF
BLAST of CsaV3_2G005040.1 vs. NCBI nr
Match: KGN60880.1 (hypothetical protein Csa_2G021510 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. NCBI nr
Match: XP_011648800.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. NCBI nr
Match: XP_011648801.1 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. NCBI nr
Match: ADI99937.1 (TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]) HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. NCBI nr
Match: ADI99935.1 (TIR-NBS-LRR class resistance protein [Cucumis sativus] >ADU33174.1 putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]) HSP 1 Score: 264.6 bits (675), Expect = 3.3e-67 Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TAIR10
Match: AT1G56540.1 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 149.1 bits (375), Expect = 3.7e-36 Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TAIR10
Match: AT5G18370.1 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TAIR10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 145.6 bits (366), Expect = 4.1e-35 Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TAIR10
Match: AT1G65850.2 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 145.2 bits (365), Expect = 5.3e-35 Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TAIR10
Match: AT1G64070.1 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34 Identity = 73/151 (48.34%), Postives = 101/151 (66.89%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. Swiss-Prot
Match: sp|Q40392|TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34 Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. Swiss-Prot
Match: sp|F4JWM0|DSC2_ARATH (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.6e-34 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. Swiss-Prot
Match: sp|Q9SZ66|DSC1_ARATH (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34 Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. Swiss-Prot
Match: sp|F4I594|RLM1A_ARATH (Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33 Identity = 73/151 (48.34%), Postives = 101/151 (66.89%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. Swiss-Prot
Match: sp|O82500|Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32 Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TrEMBL
Match: tr|A0A0A0LFP7|A0A0A0LFP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TrEMBL
Match: tr|D9I8I7|D9I8I7_CUCSA (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TrEMBL
Match: tr|D9I8I5|D9I8I5_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67 Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TrEMBL
Match: tr|E7CHD0|E7CHD0_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67 Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0
BLAST of CsaV3_2G005040.1 vs. TrEMBL
Match: tr|A0A0A0LGB6|A0A0A0LGB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67 Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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