CsaV3_2G005040 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G005040
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTIR-NBS-LRR-AAA+ATPase class resistance protein
Locationchr2 : 2727485 .. 2728495 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGACAGAGAGGAAGGTTGTTGGAATCAAGATGCCACCAAAAATATGACAGACAAAATGGAAGAAAATGAGAAACAGAGAGAGGTCTCCAAGGTATTGATAAGGTATTCACTTATATATCTTCTACTTTTCCATTCCTCAATATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAAAAACAAAAGCAATTTTTTAGAACTTATTTTTTTTAGTTACCAAGAGGACTACTTTTAAATATACCAAAATAAACAAAAATATTTACAAATTTAGAAAACATCATATTGATAGATGTTAATTGACATTGAAA

mRNA sequence

ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA

Coding sequence (CDS)

ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA

Protein sequence

MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVILLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLEILIDF
Homology
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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: KGN60880.1 (hypothetical protein Csa_2G021510 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

[Close]
BLAST of CsaV3_2G005040 vs. NCBI nr
Match: XP_011648800.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

[Close]
BLAST of CsaV3_2G005040 vs. NCBI nr
Match: XP_011648801.1 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

[Close]
BLAST of CsaV3_2G005040 vs. NCBI nr
Match: ADI99937.1 (TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 19  VFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 78
           V +SFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 79  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 138
           QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 136

Query: 139 MQAWGEALTAVSHMSGWVVLEKE 162
           MQAWGEALTAVSHMSGWVVLEK+
Sbjct: 137 MQAWGEALTAVSHMSGWVVLEKD 159

[Close]
BLAST of CsaV3_2G005040 vs. NCBI nr
Match: ADI99935.1 (TIR-NBS-LRR class resistance protein [Cucumis sativus] >ADU33174.1 putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 3.3e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

[Close]
BLAST of CsaV3_2G005040 vs. TAIR10
Match: AT1G56540.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 149.1 bits (375), Expect = 3.7e-36
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0 

Query: 4   ASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASL 63
           AS SSSSS   W ++VF SF G D R  F SHL       GI +F D RI R Q I+ +L
Sbjct: 2   ASSSSSSSRRTWRYNVFTSFHGPDVRKTFLSHLRKQFNYNGITMFDDQRIERSQIIAPAL 61

Query: 64  FEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGA 123
            EAI ES+I+IV++S+NYASSSWCL+EL++I+ CKE  GQ+V+ +FY V+PS VRKQ G 
Sbjct: 62  TEAIRESRIAIVLLSKNYASSSWCLDELLEILDCKEQLGQIVMTVFYGVHPSDVRKQTGD 121

Query: 124 FGEAFAELEVRFFDKM-QAWGEALTAVSHMSG 155
           FG AF E   R  ++  Q W +ALT V +++G
Sbjct: 122 FGIAFNETCARKTEEQRQKWSQALTYVGNIAG 153

[Close]
BLAST of CsaV3_2G005040 vs. TAIR10
Match: AT5G18370.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0 

Query: 15  WTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISI 74
           WT  VF SFRGED R  F SH+    + +GI  FID+ + RG+ I   LF+AI ESKI+I
Sbjct: 59  WTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAI 118

Query: 75  VIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEV- 134
           V++S+NYASSSWCLNELV+I+ C+E  GQ V+ +FY+V+PS VRKQ G FG+AF +  V 
Sbjct: 119 VLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVG 178

Query: 135 RFFDKMQAWGEALTAVSHMSG 155
           +  +  Q W  AL  V+++ G
Sbjct: 179 KTQEVKQRWSRALMDVANILG 199

[Close]
BLAST of CsaV3_2G005040 vs. TAIR10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-35
Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0 

Query: 9   SSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIE 68
           SSS     FDVFLSFRG DTR+NFT HL  ALR RGI+ FID+R+ RG  ++A LF+ IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 69  ESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAF 128
           +SKI+I++ S NYA+S+WCL ELVKI+ C+    Q+V+PIFYKV+ S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 129 AELEVRF----FDKMQAWGEALTAVSHMSGWVVLE 160
              E+ F     +++ +W  AL + S++ G+VV E
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGYVVKE 156

[Close]
BLAST of CsaV3_2G005040 vs. TAIR10
Match: AT1G65850.2 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-35
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 0 

Query: 4   ASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASL 63
           +S  SSSS  +WT  VF SFRGED R  F SH++   +++GI  FIDN I RG+ I   +
Sbjct: 35  SSVPSSSSSHKWTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEI 94

Query: 64  FEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGA 123
             AI ESKI+IV++S+NYASSSWCL+ELV+I+ CKE   Q+V+PIFY+V+PS V+K  G 
Sbjct: 95  IHAIRESKIAIVLLSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGN 154

Query: 124 FGEAFAELEV-RFFDKMQAWGEALTAVSHMSGW 156
           FG  F    V +  + ++ W +AL  +   +G+
Sbjct: 155 FGNVFKNNCVGKTNEVIRKWRQALAKMGTTTGY 187

[Close]
BLAST of CsaV3_2G005040 vs. TAIR10
Match: AT1G64070.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 73/151 (48.34%), Postives = 101/151 (66.89%), Query Frame = 0 

Query: 5   SGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLF 64
           + SSSS+   W + VF SF G D R++F SH        GI +F D RI RG+ IS +L 
Sbjct: 2   ASSSSSASRTWRYRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALT 61

Query: 65  EAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAF 124
           +AI ES+ISIV++S+NYASS WCL+EL++I+ CK+  GQ+V+ +FY V+PS VRKQ G F
Sbjct: 62  QAIRESRISIVLLSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEF 121

Query: 125 GEAFAE-LEVRFFDKMQAWGEALTAVSHMSG 155
           G AF E    R  ++ Q W +AL  V +++G
Sbjct: 122 GIAFNETCACRTEEERQKWSQALNYVGNIAG 152

[Close]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match: sp|Q40392|TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 0 

Query: 7   SSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDN-RISRGQEISASLFE 66
           +SSSS  RW++DVFLSFRGEDTR  FTSHL   L  +GI  F D+ R+  G  I   L +
Sbjct: 2   ASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCK 61

Query: 67  AIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFG 126
           AIEES+ +IV+ S+NYA+S WCLNELVKI+ CK    Q V+PIFY V+PS VR Q  +F 
Sbjct: 62  AIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFA 121

Query: 127 EAFAELEVRFFDK---MQAWGEALTAVSHMSG 155
           +AF E E ++ D    +Q W  AL   +++ G
Sbjct: 122 KAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153

[Close]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match: sp|F4JWM0|DSC2_ARATH (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.6e-34
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0 

Query: 15  WTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISI 74
           WT  VF SFRGED R  F SH+    + +GI  FID+ + RG+ I   LF+AI ESKI+I
Sbjct: 59  WTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAI 118

Query: 75  VIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEV- 134
           V++S+NYASSSWCLNELV+I+ C+E  GQ V+ +FY+V+PS VRKQ G FG+AF +  V 
Sbjct: 119 VLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVG 178

Query: 135 RFFDKMQAWGEALTAVSHMSG 155
           +  +  Q W  AL  V+++ G
Sbjct: 179 KTQEVKQRWSRALMDVANILG 199

[Close]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match: sp|Q9SZ66|DSC1_ARATH (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34
Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0 

Query: 9   SSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIE 68
           SSS     FDVFLSFRG DTR+NFT HL  ALR RGI+ FID+R+ RG  ++A LF+ IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 69  ESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAF 128
           +SKI+I++ S NYA+S+WCL ELVKI+ C+    Q+V+PIFYKV+ S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 129 AELEVRF----FDKMQAWGEALTAVSHMSGWVVLE 160
              E+ F     +++ +W  AL + S++ G+VV E
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGYVVKE 156

[Close]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match: sp|F4I594|RLM1A_ARATH (Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33
Identity = 73/151 (48.34%), Postives = 101/151 (66.89%), Query Frame = 0 

Query: 5   SGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLF 64
           + SSSS+   W + VF SF G D R++F SH        GI +F D RI RG+ IS +L 
Sbjct: 2   ASSSSSASRTWRYRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALT 61

Query: 65  EAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAF 124
           +AI ES+ISIV++S+NYASS WCL+EL++I+ CK+  GQ+V+ +FY V+PS VRKQ G F
Sbjct: 62  QAIRESRISIVLLSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEF 121

Query: 125 GEAFAE-LEVRFFDKMQAWGEALTAVSHMSG 155
           G AF E    R  ++ Q W +AL  V +++G
Sbjct: 122 GIAFNETCACRTEEERQKWSQALNYVGNIAG 152

[Close]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match: sp|O82500|Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = 0 

Query: 8   SSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAI 67
           +SSS   W +DVF SFRGED R+NF SHL      +GI  F D+ I R   I   L  AI
Sbjct: 2   ASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAI 61

Query: 68  EESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEA 127
            ESKIS+V+ S+NYASSSWCL+EL++I+ CKE +G  V+P+FYKV+PS +RKQ G FG +
Sbjct: 62  RESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMS 121

Query: 128 FAELEV-RFFDKMQAWGEALTAVSHMSG 155
           F E    +  ++   W  ALT  +++ G
Sbjct: 122 FLETCCGKTEERQHNWRRALTDAANILG 149

[Close]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match: tr|A0A0A0LFP7|A0A0A0LFP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

[Close]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match: tr|D9I8I7|D9I8I7_CUCSA (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 19  VFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 78
           V +SFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 79  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 138
           QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 136

Query: 139 MQAWGEALTAVSHMSGWVVLEKE 162
           MQAWGEALTAVSHMSGWVVLEK+
Sbjct: 137 MQAWGEALTAVSHMSGWVVLEKD 159

[Close]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match: tr|D9I8I5|D9I8I5_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

[Close]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match: tr|E7CHD0|E7CHD0_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

[Close]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match: tr|A0A0A0LGB6|A0A0A0LGB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0 

Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

The following BLAST results are available for this feature:
BLAST of CsaV3_2G005040 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60880.11.9e-8399.38hypothetical protein Csa_2G021510 [Cucumis sativus][more]
XP_011648800.11.9e-8399.38PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus][more]
XP_011648801.11.9e-8399.38PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis sativus][more]
ADI99937.11.7e-7197.90TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus][more]
ADI99935.13.3e-6780.12TIR-NBS-LRR class resistance protein [Cucumis sativus] >ADU33174.1 putative TIR-... [more]
BLAST of CsaV3_2G005040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G56540.13.7e-3651.97Disease resistance protein (TIR-NBS-LRR class) family[more]
AT5G18370.13.1e-3551.77Disease resistance protein (TIR-NBS-LRR class) family[more]
AT4G12010.14.1e-3550.97Disease resistance protein (TIR-NBS-LRR class) family[more]
AT1G65850.25.3e-3548.37Disease resistance protein (TIR-NBS-LRR class) family[more]
AT1G64070.11.5e-3448.34Disease resistance protein (TIR-NBS-LRR class) family[more]
BLAST of CsaV3_2G005040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40392|TMVRN_NICGU4.3e-3451.32TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1[more]
sp|F4JWM0|DSC2_ARATH5.6e-3451.77Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=... [more]
sp|Q9SZ66|DSC1_ARATH7.3e-3450.97Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=... [more]
sp|F4I594|RLM1A_ARATH2.8e-3348.34Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=4 S... [more]
sp|O82500|Y4117_ARATH1.4e-3249.32Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of CsaV3_2G005040 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFP7|A0A0A0LFP7_CUCSA1.3e-8399.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1[more]
tr|D9I8I7|D9I8I7_CUCSA1.1e-7197.90TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 ... [more]
tr|D9I8I5|D9I8I5_CUCSA2.2e-6780.12Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1[more]
tr|E7CHD0|E7CHD0_CUCSA2.2e-6780.12Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=... [more]
tr|A0A0A0LGB6|A0A0A0LGB6_CUCSA2.2e-6780.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR035897Toll_tir_struct_dom_sf
IPR000157TIR_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0043531 ADP binding
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G005040.1CsaV3_2G005040.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255till_3coord: 16..152
e-value: 1.1E-49
score: 181.0
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 17..150
e-value: 1.4E-44
score: 151.9
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 15..152
score: 27.473
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyGENE3DG3DSA:3.40.50.10140coord: 11..166
e-value: 3.4E-63
score: 214.4
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilySUPERFAMILYSSF52200Toll/Interleukin receptor TIR domaincoord: 6..155
NoneNo IPR availablePANTHERPTHR11017LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 4..157
NoneNo IPR availablePANTHERPTHR11017:SF200SUBFAMILY NOT NAMEDcoord: 4..157

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G005040CSPI02G03720Wild cucumber (PI 183967)cpicucB080
CsaV3_2G005040MELO3C004295Melon (DHL92) v3.5.1cucmeB141
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G005040Silver-seed gourdcarcucB0754
CsaV3_2G005040Silver-seed gourdcarcucB0940
CsaV3_2G005040Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G005040Cucumber (Gy14) v2cgybcucB064
CsaV3_2G005040Cucumber (Gy14) v1cgycucB097
CsaV3_2G005040Cucurbita maxima (Rimu)cmacucB0202
CsaV3_2G005040Cucurbita moschata (Rifu)cmocucB0185
CsaV3_2G005040Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G005040Cucurbita pepo (Zucchini)cpecucB0010
CsaV3_2G005040Cucurbita pepo (Zucchini)cpecucB0114
CsaV3_2G005040Cucurbita pepo (Zucchini)cpecucB1014
CsaV3_2G005040Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G005040Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G005040Watermelon (Charleston Gray)cucwcgB137
CsaV3_2G005040Watermelon (97103) v1cucwmB159
CsaV3_2G005040Watermelon (97103) v2cucwmbB123
CsaV3_2G005040Wax gourdcucwgoB157