Csa7G446660.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G446660.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17647040 .. 17647339 (+)
Sequence length198
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAAGTCTTTGTTTCGTGTTAATATGAGGAGGGAGCGAGAGTAGATCGAAGCTTAGCAGTTACGTCATAAATTTACGATAATGCCATTCGCGGCGGAATGATTCAGCGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

mRNA sequence

ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAACGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

Coding sequence (CDS)

ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAACGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

Protein sequence

MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSVPILDL*
Homology
[Close]
BLAST of Csa7G446660.1 vs. TrEMBL
Match: A0A0A0K915_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446660 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.0e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60
          MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV
Sbjct: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60

Query: 61 PILDL 66
          PILDL
Sbjct: 61 PILDL 65

[Close]
BLAST of Csa7G446660.1 vs. NCBI nr
Match: gi|700190116|gb|KGN45349.1| (hypothetical protein Csa_7G446660 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.1e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60
          MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV
Sbjct: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60

Query: 61 PILDL 66
          PILDL
Sbjct: 61 PILDL 65

The following BLAST results are available for this feature:
BLAST of Csa7G446660.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K915_CUCSA5.0e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446660 PE=4 SV=1[more]
BLAST of Csa7G446660.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190116|gb|KGN45349.1|7.1e-29100.00hypothetical protein Csa_7G446660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G446660Csa7G446660gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G446660.1Csa7G446660.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G446660.1.cds1Csa7G446660.1.cds1CDS
Csa7G446660.1.cds2Csa7G446660.1.cds2CDS