Csa7G446660 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G446660
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17647040 .. 17647339 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAAGTCTTTGTTTCGTGTTAATATGAGGAGGGAGCGAGAGTAGATCGAAGCTTAGCAGTTACGTCATAAATTTACGATAATGCCATTCGCGGCGGAATGATTCAGCGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

mRNA sequence

ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAACGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

Coding sequence (CDS)

ATGAAGGTGATCGCAGCTTGGAGAAGAGAAATGTGGAGAGATGTTTCAGAGTTGAACCATGGAACGCAGCCGATACTACGAAGAACAACCAATAAAACTCATGTGATAGTCAAGATCGAGATCCACGATTCCACGTCAGCATTACTCATTGCCCACGCTGGCACCTCTTGCAATTCCGTCCCTATCTTGGACCTTTAG

Protein sequence

MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSVPILDL*
Homology
[Close]
BLAST of Csa7G446660 vs. TrEMBL
Match: A0A0A0K915_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446660 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.0e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60
          MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV
Sbjct: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60

Query: 61 PILDL 66
          PILDL
Sbjct: 61 PILDL 65

[Close]
BLAST of Csa7G446660 vs. NCBI nr
Match: gi|700190116|gb|KGN45349.1| (hypothetical protein Csa_7G446660 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.1e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60
          MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV
Sbjct: 1  MKVIAAWRREMWRDVSELNHGTQPILRRTTNKTHVIVKIEIHDSTSALLIAHAGTSCNSV 60

Query: 61 PILDL 66
          PILDL
Sbjct: 61 PILDL 65

The following BLAST results are available for this feature:
BLAST of Csa7G446660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K915_CUCSA5.0e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446660 PE=4 SV=1[more]
BLAST of Csa7G446660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190116|gb|KGN45349.1|7.1e-29100.00hypothetical protein Csa_7G446660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G446660.1Csa7G446660.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G446660Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G446660Bottle gourd (USVL1VR-Ls)culsiB532
Csa7G446660Cucumber (Gy14) v2cgybcuB154
Csa7G446660Cucumber (Gy14) v2cgybcuB323
Csa7G446660Melon (DHL92) v3.6.1cumedB501
Csa7G446660Melon (DHL92) v3.6.1cumedB529
Csa7G446660Silver-seed gourdcarcuB0143
Csa7G446660Silver-seed gourdcarcuB0130
Csa7G446660Silver-seed gourdcarcuB0229
Csa7G446660Silver-seed gourdcarcuB0763
Csa7G446660Silver-seed gourdcarcuB1041
Csa7G446660Watermelon (97103) v2cuwmbB548
Csa7G446660Watermelon (97103) v2cuwmbB570
Csa7G446660Wax gourdcuwgoB660
Csa7G446660Wax gourdcuwgoB690
Csa7G446660Wax gourdcuwgoB712
Csa7G446660Cucumber (Gy14) v1cgycuB508
Csa7G446660Cucurbita maxima (Rimu)cmacuB081
Csa7G446660Cucurbita maxima (Rimu)cmacuB150
Csa7G446660Cucurbita maxima (Rimu)cmacuB275
Csa7G446660Cucurbita maxima (Rimu)cmacuB388
Csa7G446660Cucurbita maxima (Rimu)cmacuB497
Csa7G446660Cucurbita maxima (Rimu)cmacuB915
Csa7G446660Cucurbita moschata (Rifu)cmocuB072
Csa7G446660Cucurbita moschata (Rifu)cmocuB136
Csa7G446660Cucurbita moschata (Rifu)cmocuB263
Csa7G446660Cucurbita moschata (Rifu)cmocuB378
Csa7G446660Cucurbita moschata (Rifu)cmocuB486
Csa7G446660Cucurbita moschata (Rifu)cmocuB901
Csa7G446660Melon (DHL92) v3.5.1cumeB521
Csa7G446660Melon (DHL92) v3.5.1cumeB552
Csa7G446660Watermelon (Charleston Gray)cuwcgB524
Csa7G446660Watermelon (Charleston Gray)cuwcgB564
Csa7G446660Watermelon (97103) v1cuwmB566
Csa7G446660Watermelon (97103) v1cuwmB585
Csa7G446660Cucurbita pepo (Zucchini)cpecuB161
Csa7G446660Cucurbita pepo (Zucchini)cpecuB345
Csa7G446660Cucurbita pepo (Zucchini)cpecuB378
Csa7G446660Cucurbita pepo (Zucchini)cpecuB588
Csa7G446660Cucurbita pepo (Zucchini)cpecuB700