Csa7G387140.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G387140.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	RING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr7 : 14169801 .. 14170280 (+)
Sequence length	480

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

mRNA sequence

ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Coding sequence (CDS)

ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Protein sequence

MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI*

Homology

[Close]

BLAST of Csa7G387140.1 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1


Query: 54  RKRSAKSDGEELPENLDIEAPIFHYNGVEG----DEQECAICLCEIEEGEKCRKMKTCGH 113
           R  SA    + L + +  + PIF Y+        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 114 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMASSSSLPT 154
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of Csa7G387140.1 vs. Swiss-Prot
Match: ATL66_ARATH (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 1


Query: 82  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 136
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of Csa7G387140.1 vs. Swiss-Prot
Match: ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 41  LLIVLFSFILILC---------RKRSAKSDGE--------ELPENLDIEA----PIFHYN 100
           LL+  + F++  C         R+R   SD          E+   LD  A    P+F + 
Sbjct: 57  LLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFK 116

Query: 101 G---VEGDE------QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 134
               V G+E      QEC++CL E +E EK R +  C HVFH DCID W + + +CP+CR
Sbjct: 117 KRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176

[Close]

BLAST of Csa7G387140.1 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-11
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1


Query: 74  PIFHYNGV--EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 133
           PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of Csa7G387140.1 vs. Swiss-Prot
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 1


Query: 34  LLTVPMLLLIVLFS-FILILCRK-----------RSAKSDGEE--------LPENLDIEA 93
           ++ + +L L++ F  F  I CR+           RS  +D E             LD EA
Sbjct: 52  VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111

Query: 94  ----PIFHYNGVEGDE-----QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDG 134
               P F Y+ V+         ECA+CLCE E+ E  R M  C HVFH DC+D W     
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171

[Close]

BLAST of Csa7G387140.1 vs. TrEMBL
Match: A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.3e-88
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60
           MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120
           DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF
Sbjct: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120

Query: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 159

[Close]

BLAST of Csa7G387140.1 vs. TrEMBL
Match: A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.7e-63
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           M LSPSP+PSLHSLILLP +I DLL   M L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFIN 158
           TSVCVVVVD GGNA+ SS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

[Close]

BLAST of Csa7G387140.1 vs. TrEMBL
Match: A0A0A0LUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.0e-59
Identity = 110/128 (85.94%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 32  MDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAIC 91
           M L+TV MLLLIVLF FI ILC KRSAK DGEE  +NLDIEAPIFHY+GVEG EQEC IC
Sbjct: 1   MVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGGEQECVIC 60

Query: 92  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSL 151
           LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICRTSVC+VV+D GGNAMASSSSL
Sbjct: 61  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDRGGNAMASSSSL 120

Query: 152 PTPFINQI 160
           PTPFIN+I
Sbjct: 121 PTPFINRI 128

[Close]

BLAST of Csa7G387140.1 vs. TrEMBL
Match: A0A0A0LY13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51
Identity = 98/121 (80.99%), Postives = 106/121 (87.60%), Query Frame = 1


Query: 37  VPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIE 96
           V M L IVL  FI I+C KR AKSD EELP+N+D+EA +FHYNG EG EQE AICLCEIE
Sbjct: 2   VSMFLPIVLLFFISIVCSKRFAKSDVEELPKNVDLEALVFHYNGDEGGEQEYAICLCEIE 61

Query: 97  EGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFI 156
           EGEKCRKMKTCGHVFHKDCIDRWFKVD HCPICRTSVCVVVVDHGGNAMASS+SLP P++
Sbjct: 62  EGEKCRKMKTCGHVFHKDCIDRWFKVDDHCPICRTSVCVVVVDHGGNAMASSTSLPIPYM 121

Query: 157 N 158
           N
Sbjct: 122 N 122

[Close]

BLAST of Csa7G387140.1 vs. TrEMBL
Match: A0A0A0M0G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G513470 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.6e-43
Identity = 99/149 (66.44%), Postives = 103/149 (69.13%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+  LHS ILL GF M LLT+ ML LIVLF FI+ILC KRSAK DGEEL ENLD
Sbjct: 1   MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY GVEG EQE                           C DRWFKVDGHCPI R
Sbjct: 61  IEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           T VCVVVVD GG AMASSSSLPTPFIN+I
Sbjct: 121 TFVCVVVVDRGGIAMASSSSLPTPFINRI 123

[Close]

BLAST of Csa7G387140.1 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-13
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1


Query: 54  RKRSAKSDGEELPENLDIEAPIFHYNGVEG----DEQECAICLCEIEEGEKCRKMKTCGH 113
           R  SA    + L + +  + PIF Y+        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 114 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMASSSSLPT 154
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of Csa7G387140.1 vs. TAIR10
Match: AT3G11110.1 (AT3G11110.1 RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 1


Query: 82  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 136
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of Csa7G387140.1 vs. TAIR10
Match: AT1G04360.1 (AT1G04360.1 RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 41  LLIVLFSFILILC---------RKRSAKSDGE--------ELPENLDIEA----PIFHYN 100
           LL+  + F++  C         R+R   SD          E+   LD  A    P+F + 
Sbjct: 57  LLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFK 116

Query: 101 G---VEGDE------QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 134
               V G+E      QEC++CL E +E EK R +  C HVFH DCID W + + +CP+CR
Sbjct: 117 KRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176

[Close]

BLAST of Csa7G387140.1 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1


Query: 74  PIFHYNGV--EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 133
           PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of Csa7G387140.1 vs. TAIR10
Match: AT2G35000.1 (AT2G35000.1 RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 1


Query: 34  LLTVPMLLLIVLFS-FILILCRK-----------RSAKSDGEE--------LPENLDIEA 93
           ++ + +L L++ F  F  I CR+           RS  +D E             LD EA
Sbjct: 52  VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111

Query: 94  ----PIFHYNGVEGDE-----QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDG 134
               P F Y+ V+         ECA+CLCE E+ E  R M  C HVFH DC+D W     
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171

[Close]

BLAST of Csa7G387140.1 vs. NCBI nr
Match: gi|700189546|gb|KGN44779.1| (hypothetical protein Csa_7G387140 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.3e-88
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60
           MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120
           DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF
Sbjct: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120

Query: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 159

[Close]

BLAST of Csa7G387140.1 vs. NCBI nr
Match: gi|778730386|ref|XP_011659772.1| (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-82
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD
Sbjct: 1   MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR
Sbjct: 61  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 TSVCVVVVDHGGNAMASSSSLPTPFINQI 149

[Close]

BLAST of Csa7G387140.1 vs. NCBI nr
Match: gi|778730799|ref|XP_011659858.1| (PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 131/149 (87.92%), Postives = 136/149 (91.28%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+P LHS ILLPGF M LLT+ MLLLIVLF FI ILC KRSAKSD EEL ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHYN VEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVCVVV+D GGNAMASSSSLPTPFIN+I
Sbjct: 121 TSVCVVVIDRGGNAMASSSSLPTPFINRI 149

[Close]

BLAST of Csa7G387140.1 vs. NCBI nr
Match: gi|778665201|ref|XP_011648512.1| (PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-69
Identity = 127/149 (85.23%), Postives = 135/149 (90.60%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+P LHS ILLPGF M L+TV MLLLIVLF FI ILC KRSAK DGEE  +NLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY+GVEG EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYSGVEGGEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVC+VV+D GGNAMASSSSLPTPFIN+I
Sbjct: 121 TSVCMVVIDRGGNAMASSSSLPTPFINRI 149

[Close]

BLAST of Csa7G387140.1 vs. NCBI nr
Match: gi|778665205|ref|XP_011648513.1| (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 8.2e-63
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 1


Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           M LSPSP+PSLHSLILLP +I DLL   M L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFIN 158
           TSVCVVVVD GGNA+ SS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

The following BLAST results are available for this feature:

BLAST of Csa7G387140.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL64_ARATH	1.1e-11	34.91	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1	[more]
ATL66_ARATH	4.3e-11	48.15	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1	[more]
ATL1_ARATH	5.6e-11	35.77	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1	[more]
ATL5_ARATH	7.3e-11	48.39	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1	[more]
ATL9_ARATH	9.5e-11	33.33	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1	[more]

BLAST of Csa7G387140.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K790_CUCSA	2.3e-88	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1	[more]
A0A0A0LY10_CUCSA	5.7e-63	80.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1	[more]
A0A0A0LUU6_CUCSA	5.0e-59	85.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1	[more]
A0A0A0LY13_CUCSA	1.7e-51	80.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1	[more]
A0A0A0M0G7_CUCSA	8.6e-43	66.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G513470 PE=4 SV=1	[more]

BLAST of Csa7G387140.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47560.1	6.3e-13	34.91	RING/U-box superfamily protein	[more]
AT3G11110.1	2.4e-12	48.15	RING/U-box superfamily protein	[more]
AT1G04360.1	3.1e-12	35.77	RING/U-box superfamily protein	[more]
AT3G62690.1	4.1e-12	48.39	AtL5	[more]
AT2G35000.1	5.4e-12	33.33	RING/U-box superfamily protein	[more]

BLAST of Csa7G387140.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189546\|gb\|KGN44779.1\|	3.3e-88	100.00	hypothetical protein Csa_7G387140 [Cucumis sativus]	[more]
gi\|778730386\|ref\|XP_011659772.1\|	1.6e-82	100.00	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus]	[more]
gi\|778730799\|ref\|XP_011659858.1\|	1.1e-70	87.92	PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]
gi\|778665201\|ref\|XP_011648512.1\|	2.6e-69	85.23	PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]	[more]
gi\|778665205\|ref\|XP_011648513.1\|	8.2e-63	80.27	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G387140	Csa7G387140	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa7G387140.1	Csa7G387140.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa7G387140.1.cds1	Csa7G387140.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..130 score: 5.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 88..129 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 88..130 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 84..133 score: 1.1
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..158 score: 2.0
None	No IPR available	PANTHER	PTHR14155:SF102	RING ZINC FINGER-CONTAINING PROTEIN	coord: 12..158 score: 2.0
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 81..136 score: 3.53