Csa7G387140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G387140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr7 : 14169801 .. 14170280 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

mRNA sequence

ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Coding sequence (CDS)

ATGTCATCTCCAAATATTTTACCGTCCCTCATGCCGTTGTCACCGTCGCCTATACCGTCGTTGCACTCACTGATCCTACTTCCTGGCTTCATTATGGATTTGCTAACGGTCCCCATGCTTCTTCTCATTGTGCTATTTTCATTCATTCTCATTTTATGTAGAAAACGATCCGCCAAATCTGACGGGGAAGAGTTGCCGGAGAATCTGGACATTGAAGCACCAATCTTTCATTACAACGGAGTTGAAGGCGACGAACAAGAATGTGCGATTTGCCTTTGTGAAATTGAGGAAGGAGAGAAGTGTAGAAAGATGAAGACGTGTGGTCATGTGTTTCATAAAGACTGCATTGACCGATGGTTTAAGGTGGATGGCCATTGTCCAATTTGTCGTACCTCCGTTTGTGTGGTAGTCGTTGATCACGGTGGAAATGCCATGGCTTCTTCTTCATCTTTACCGACCCCTTTCATCAACCAAATTTAA

Protein sequence

MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI*
Homology
[Close]
BLAST of Csa7G387140 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1 

Query: 54  RKRSAKSDGEELPENLDIEAPIFHYNGVEG----DEQECAICLCEIEEGEKCRKMKTCGH 113
           R  SA    + L + +  + PIF Y+        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 114 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMASSSSLPT 154
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]
BLAST of Csa7G387140 vs. Swiss-Prot
Match: ATL66_ARATH (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.3e-11
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 1 

Query: 82  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 136
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]
BLAST of Csa7G387140 vs. Swiss-Prot
Match: ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 41  LLIVLFSFILILC---------RKRSAKSDGE--------ELPENLDIEA----PIFHYN 100
           LL+  + F++  C         R+R   SD          E+   LD  A    P+F + 
Sbjct: 57  LLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFK 116

Query: 101 G---VEGDE------QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 134
               V G+E      QEC++CL E +E EK R +  C HVFH DCID W + + +CP+CR
Sbjct: 117 KRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176

[Close]
BLAST of Csa7G387140 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-11
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1 

Query: 74  PIFHYNGV--EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 133
           PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]
BLAST of Csa7G387140 vs. Swiss-Prot
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 1 

Query: 34  LLTVPMLLLIVLFS-FILILCRK-----------RSAKSDGEE--------LPENLDIEA 93
           ++ + +L L++ F  F  I CR+           RS  +D E             LD EA
Sbjct: 52  VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111

Query: 94  ----PIFHYNGVEGDE-----QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDG 134
               P F Y+ V+         ECA+CLCE E+ E  R M  C HVFH DC+D W     
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171

[Close]
BLAST of Csa7G387140 vs. TrEMBL
Match: A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.3e-88
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

Query: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60
           MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120
           DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF
Sbjct: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120

Query: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 159

[Close]
BLAST of Csa7G387140 vs. TrEMBL
Match: A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.7e-63
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           M LSPSP+PSLHSLILLP +I DLL   M L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFIN 158
           TSVCVVVVD GGNA+ SS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

[Close]
BLAST of Csa7G387140 vs. TrEMBL
Match: A0A0A0LUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.0e-59
Identity = 110/128 (85.94%), Postives = 117/128 (91.41%), Query Frame = 1 

Query: 32  MDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAIC 91
           M L+TV MLLLIVLF FI ILC KRSAK DGEE  +NLDIEAPIFHY+GVEG EQEC IC
Sbjct: 1   MVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGGEQECVIC 60

Query: 92  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSL 151
           LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICRTSVC+VV+D GGNAMASSSSL
Sbjct: 61  LCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDRGGNAMASSSSL 120

Query: 152 PTPFINQI 160
           PTPFIN+I
Sbjct: 121 PTPFINRI 128

[Close]
BLAST of Csa7G387140 vs. TrEMBL
Match: A0A0A0LY13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51
Identity = 98/121 (80.99%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 37  VPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIE 96
           V M L IVL  FI I+C KR AKSD EELP+N+D+EA +FHYNG EG EQE AICLCEIE
Sbjct: 2   VSMFLPIVLLFFISIVCSKRFAKSDVEELPKNVDLEALVFHYNGDEGGEQEYAICLCEIE 61

Query: 97  EGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFI 156
           EGEKCRKMKTCGHVFHKDCIDRWFKVD HCPICRTSVCVVVVDHGGNAMASS+SLP P++
Sbjct: 62  EGEKCRKMKTCGHVFHKDCIDRWFKVDDHCPICRTSVCVVVVDHGGNAMASSTSLPIPYM 121

Query: 157 N 158
           N
Sbjct: 122 N 122

[Close]
BLAST of Csa7G387140 vs. TrEMBL
Match: A0A0A0M0G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G513470 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.6e-43
Identity = 99/149 (66.44%), Postives = 103/149 (69.13%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+  LHS ILL GF M LLT+ ML LIVLF FI+ILC KRSAK DGEEL ENLD
Sbjct: 1   MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY GVEG EQE                           C DRWFKVDGHCPI R
Sbjct: 61  IEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           T VCVVVVD GG AMASSSSLPTPFIN+I
Sbjct: 121 TFVCVVVVDRGGIAMASSSSLPTPFINRI 123

[Close]
BLAST of Csa7G387140 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-13
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1 

Query: 54  RKRSAKSDGEELPENLDIEAPIFHYNGVEG----DEQECAICLCEIEEGEKCRKMKTCGH 113
           R  SA    + L + +  + PIF Y+        +++EC++CL E EE ++ R +  CGH
Sbjct: 70  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 129

Query: 114 VFHKDCIDRWFKVDGHCPICRTSV--CVVVVDHGGNAMASSSSLPT 154
            FH DCID WF+    CP+CR  V     V++ G ++ +S  + PT
Sbjct: 130 SFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]
BLAST of Csa7G387140 vs. TAIR10
Match: AT3G11110.1 (AT3G11110.1 RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 26/54 (48.15%), Postives = 34/54 (62.96%), Query Frame = 1 

Query: 82  EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCV 136
           E +E+EC ICL   EEGEK + +  C H +H +C+DRW K +  CP+CR S+ V
Sbjct: 101 EEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]
BLAST of Csa7G387140 vs. TAIR10
Match: AT1G04360.1 (AT1G04360.1 RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 1 

Query: 41  LLIVLFSFILILC---------RKRSAKSDGE--------ELPENLDIEA----PIFHYN 100
           LL+  + F++  C         R+R   SD          E+   LD  A    P+F + 
Sbjct: 57  LLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFK 116

Query: 101 G---VEGDE------QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 134
               V G+E      QEC++CL E +E EK R +  C HVFH DCID W + + +CP+CR
Sbjct: 117 KRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176

[Close]
BLAST of Csa7G387140 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1 

Query: 74  PIFHYNGV--EGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 133
           PIF Y+    E   +EC++CL E EE ++ R +  CGHVFH DCID WF+    CP+CR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]
BLAST of Csa7G387140 vs. TAIR10
Match: AT2G35000.1 (AT2G35000.1 RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-12
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 1 

Query: 34  LLTVPMLLLIVLFS-FILILCRK-----------RSAKSDGEE--------LPENLDIEA 93
           ++ + +L L++ F  F  I CR+           RS  +D E             LD EA
Sbjct: 52  VVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEA 111

Query: 94  ----PIFHYNGVEGDE-----QECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDG 134
               P F Y+ V+         ECA+CLCE E+ E  R M  C HVFH DC+D W     
Sbjct: 112 IETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHS 171

[Close]
BLAST of Csa7G387140 vs. NCBI nr
Match: gi|700189546|gb|KGN44779.1| (hypothetical protein Csa_7G387140 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.3e-88
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

Query: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60
           MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120
           DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF
Sbjct: 61  DGEELPENLDIEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWF 120

Query: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 KVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPFINQI 159

[Close]
BLAST of Csa7G387140 vs. NCBI nr
Match: gi|778730386|ref|XP_011659772.1| (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-82
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD
Sbjct: 1   MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR
Sbjct: 61  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVCVVVVDHGGNAMASSSSLPTPFINQI
Sbjct: 121 TSVCVVVVDHGGNAMASSSSLPTPFINQI 149

[Close]
BLAST of Csa7G387140 vs. NCBI nr
Match: gi|778730799|ref|XP_011659858.1| (PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 131/149 (87.92%), Postives = 136/149 (91.28%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+P LHS ILLPGF M LLT+ MLLLIVLF FI ILC KRSAKSD EEL ENLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMLLLIVLFLFIAILCTKRSAKSDREELSENLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHYN VEG EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVCVVV+D GGNAMASSSSLPTPFIN+I
Sbjct: 121 TSVCVVVIDRGGNAMASSSSLPTPFINRI 149

[Close]
BLAST of Csa7G387140 vs. NCBI nr
Match: gi|778665201|ref|XP_011648512.1| (PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-69
Identity = 127/149 (85.23%), Postives = 135/149 (90.60%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           MPLSPSP+P LHS ILLPGF M L+TV MLLLIVLF FI ILC KRSAK DGEE  +NLD
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLMTVSMLLLIVLFLFIAILCTKRSAKYDGEESSDNLD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY+GVEG EQEC ICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKV+GHCPICR
Sbjct: 61  IEAPIFHYSGVEGGEQECVICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFINQI 160
           TSVC+VV+D GGNAMASSSSLPTPFIN+I
Sbjct: 121 TSVCMVVIDRGGNAMASSSSLPTPFINRI 149

[Close]
BLAST of Csa7G387140 vs. NCBI nr
Match: gi|778665205|ref|XP_011648513.1| (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 8.2e-63
Identity = 118/147 (80.27%), Postives = 126/147 (85.71%), Query Frame = 1 

Query: 11  MPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLD 70
           M LSPSP+PSLHSLILLP +I DLL   M L IVL  FI ILCRKRSAKSD EE PEN+D
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVD 60

Query: 71  IEAPIFHYNGVEGDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICR 130
           IEAPIFHY G EG EQ+CAICLCEIEEGEKCRKMKTCGHVFHKDCI RWFKVDGHCPICR
Sbjct: 61  IEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICR 120

Query: 131 TSVCVVVVDHGGNAMASSSSLPTPFIN 158
           TSVCVVVVD GGNA+ SS+SL  P++N
Sbjct: 121 TSVCVVVVDRGGNAITSSTSLLIPYMN 147

The following BLAST results are available for this feature:
BLAST of Csa7G387140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL64_ARATH1.1e-1134.91RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
ATL66_ARATH4.3e-1148.15RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1[more]
ATL1_ARATH5.6e-1135.77RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1[more]
ATL5_ARATH7.3e-1148.39RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
ATL9_ARATH9.5e-1133.33E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1[more]
BLAST of Csa7G387140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K790_CUCSA2.3e-88100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1[more]
A0A0A0LY10_CUCSA5.7e-6380.27Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1[more]
A0A0A0LUU6_CUCSA5.0e-5985.94Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1[more]
A0A0A0LY13_CUCSA1.7e-5180.99Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1[more]
A0A0A0M0G7_CUCSA8.6e-4366.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G513470 PE=4 SV=1[more]
BLAST of Csa7G387140 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47560.16.3e-1334.91 RING/U-box superfamily protein[more]
AT3G11110.12.4e-1248.15 RING/U-box superfamily protein[more]
AT1G04360.13.1e-1235.77 RING/U-box superfamily protein[more]
AT3G62690.14.1e-1248.39 AtL5[more]
AT2G35000.15.4e-1233.33 RING/U-box superfamily protein[more]
BLAST of Csa7G387140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189546|gb|KGN44779.1|3.3e-88100.00hypothetical protein Csa_7G387140 [Cucumis sativus][more]
gi|778730386|ref|XP_011659772.1|1.6e-82100.00PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus][more]
gi|778730799|ref|XP_011659858.1|1.1e-7087.92PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus][more]
gi|778665201|ref|XP_011648512.1|2.6e-6985.23PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus][more]
gi|778665205|ref|XP_011648513.1|8.2e-6380.27PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G387140.1Csa7G387140.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 86..130
score: 5.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 88..129
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 88..130
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 84..133
score: 1.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 12..158
score: 2.0
NoneNo IPR availablePANTHERPTHR14155:SF102RING ZINC FINGER-CONTAINING PROTEINcoord: 12..158
score: 2.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 81..136
score: 3.53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G387140CSPI07G16030Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G387140Cucumber (Chinese Long) v2cucuB082
Csa7G387140Cucumber (Chinese Long) v2cucuB175
Csa7G387140Cucurbita maxima (Rimu)cmacuB924
Csa7G387140Cucumber (Gy14) v1cgycuB186
Csa7G387140Cucurbita maxima (Rimu)cmacuB202
Csa7G387140Cucurbita maxima (Rimu)cmacuB387
Csa7G387140Cucurbita maxima (Rimu)cmacuB388
Csa7G387140Cucurbita maxima (Rimu)cmacuB914
Csa7G387140Cucurbita moschata (Rifu)cmocuB187
Csa7G387140Cucurbita moschata (Rifu)cmocuB377
Csa7G387140Cucurbita moschata (Rifu)cmocuB378
Csa7G387140Cucurbita moschata (Rifu)cmocuB900
Csa7G387140Cucurbita moschata (Rifu)cmocuB910
Csa7G387140Melon (DHL92) v3.5.1cumeB522
Csa7G387140Melon (DHL92) v3.5.1cumeB557
Csa7G387140Watermelon (Charleston Gray)cuwcgB520
Csa7G387140Watermelon (Charleston Gray)cuwcgB525
Csa7G387140Watermelon (Charleston Gray)cuwcgB551
Csa7G387140Watermelon (Charleston Gray)cuwcgB559
Csa7G387140Watermelon (Charleston Gray)cuwcgB562
Csa7G387140Watermelon (97103) v1cuwmB559
Csa7G387140Watermelon (97103) v1cuwmB567
Csa7G387140Watermelon (97103) v1cuwmB608
Csa7G387140Watermelon (97103) v1cuwmB614
Csa7G387140Cucurbita pepo (Zucchini)cpecuB161
Csa7G387140Cucurbita pepo (Zucchini)cpecuB341
Csa7G387140Cucurbita pepo (Zucchini)cpecuB344
Csa7G387140Cucurbita pepo (Zucchini)cpecuB348
Csa7G387140Bottle gourd (USVL1VR-Ls)culsiB487
Csa7G387140Bottle gourd (USVL1VR-Ls)culsiB498
Csa7G387140Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G387140Bottle gourd (USVL1VR-Ls)culsiB512
Csa7G387140Cucumber (Gy14) v2cgybcuB090
Csa7G387140Cucumber (Gy14) v2cgybcuB323
Csa7G387140Melon (DHL92) v3.6.1cumedB502
Csa7G387140Melon (DHL92) v3.6.1cumedB519
Csa7G387140Silver-seed gourdcarcuB0056
Csa7G387140Silver-seed gourdcarcuB0118
Csa7G387140Silver-seed gourdcarcuB0120
Csa7G387140Watermelon (97103) v2cuwmbB534
Csa7G387140Watermelon (97103) v2cuwmbB547
Csa7G387140Watermelon (97103) v2cuwmbB553
Csa7G387140Watermelon (97103) v2cuwmbB564
Csa7G387140Watermelon (97103) v2cuwmbB571
Csa7G387140Wax gourdcuwgoB698
Csa7G387140Wax gourdcuwgoB705
Csa7G387140Wax gourdcuwgoB708