Csa7G279840.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa7G279840.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9899296 .. 9899665 (-)
Sequence length276
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACAATCGCATGTAGAAAGTAGGAGAGCCAAGCCGCTCAGAATGTGTCAAGTTCATTCAGTATCAGAATCTGCTTTTCGAACTCTCGACTCTCAATTGAAGCCACTATACAATCATTCGTAGAAAGTAAGAGAGCCATGCCATTTCGTGGTAGAATGCGTCAGGTTCCTTCGGTATCAAAACCTATATAGGAAACTCTCGACTCTCAATCGAAGCCATAATCGTCTGTATAAAGGAGAGACATGCTGCTTCGGGCAAGAATGCATCGGGTTCTTTCGGTATAAAAGAATGCGTGTGGAACTCTGGGCTCTTGGCCGAAGCCACATTACAATCGCCCGTAGAAAGTAGGAGAGCCAAGCCGCTTTAG

mRNA sequence

ATGTTACAATCGCATGTAGAAAGTAGGAGAGCCAAGCCGCTCAGAATGTGTCAAGTTCATTCAAATGCGTCAGGTTCCTTCGGTATCAAAACCTATATAGGAAACTCTCGACTCTCAATCGAAGCCATAATCGTCTGTATAAAGGAGAGACATGCTGCTTCGGGCAAGAATGCATCGGGTTCTTTCGGTATAAAAGAATGCGTGTGGAACTCTGGGCTCTTGGCCGAAGCCACATTACAATCGCCCGTAGAAAGTAGGAGAGCCAAGCCGCTTTAG

Coding sequence (CDS)

ATGTTACAATCGCATGTAGAAAGTAGGAGAGCCAAGCCGCTCAGAATGTGTCAAGTTCATTCAAATGCGTCAGGTTCCTTCGGTATCAAAACCTATATAGGAAACTCTCGACTCTCAATCGAAGCCATAATCGTCTGTATAAAGGAGAGACATGCTGCTTCGGGCAAGAATGCATCGGGTTCTTTCGGTATAAAAGAATGCGTGTGGAACTCTGGGCTCTTGGCCGAAGCCACATTACAATCGCCCGTAGAAAGTAGGAGAGCCAAGCCGCTTTAG

Protein sequence

MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASGSFGIKECVWNSGLLAEATLQSPVESRRAKPL*
Homology
[Close]
BLAST of Csa7G279840.1 vs. TrEMBL
Match: A0A0A0K7T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279840 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.2e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG 60
          MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG
Sbjct: 1  MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG 60

Query: 61 SFGIKECVWNSGLLAEATLQSPVESRRAKPL 92
          SFGIKECVWNSGLLAEATLQSPVESRRAKPL
Sbjct: 61 SFGIKECVWNSGLLAEATLQSPVESRRAKPL 91

[Close]
BLAST of Csa7G279840.1 vs. NCBI nr
Match: gi|700189169|gb|KGN44402.1| (hypothetical protein Csa_7G279840 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-43
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG 60
          MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG
Sbjct: 1  MLQSHVESRRAKPLRMCQVHSNASGSFGIKTYIGNSRLSIEAIIVCIKERHAASGKNASG 60

Query: 61 SFGIKECVWNSGLLAEATLQSPVESRRAKPL 92
          SFGIKECVWNSGLLAEATLQSPVESRRAKPL
Sbjct: 61 SFGIKECVWNSGLLAEATLQSPVESRRAKPL 91

The following BLAST results are available for this feature:
BLAST of Csa7G279840.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7T7_CUCSA2.2e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279840 PE=4 SV=1[more]
BLAST of Csa7G279840.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189169|gb|KGN44402.1|3.2e-43100.00hypothetical protein Csa_7G279840 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa7G279840Csa7G279840gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa7G279840.1Csa7G279840.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa7G279840.1.cds2Csa7G279840.1.cds2CDS
Csa7G279840.1.cds1Csa7G279840.1.cds1CDS