Csa6G490010.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa6G490010.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 23170520 .. 23170765 (-)
Sequence length165
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGATTAAGTACGGCAGCCACCGTAGGATTCAATTACTTGAGGAAGTGAAGAAAGAGCCAAGTAGCGTTGAAGGAAAGCTGAAGAAAGATGAACAGCAGGTGCGATGTGGTGAGTGAACGGCTCGAGAGAGAAACAAGAGACGCGATAGTTTTGTATGTGTGCGAACAATTTGCGCGCGTTGGGTCGGAGGGTGTGCACTAATTTGCACGGGAGTTGCTAAAGCTGGACCCTCTTTTGGGTGA

mRNA sequence

ATGCTGATTAAGTACGGCAGCCACCGTAGGATTCAATTACTTGAGGAAGTGAAGAAAGAGCCAAGTAGCGTTGAAGGAAAGCTGAAGAAAGATGAACAGCAGGTGCGATGTGGGTGTGCACTAATTTGCACGGGAGTTGCTAAAGCTGGACCCTCTTTTGGGTGA

Coding sequence (CDS)

ATGCTGATTAAGTACGGCAGCCACCGTAGGATTCAATTACTTGAGGAAGTGAAGAAAGAGCCAAGTAGCGTTGAAGGAAAGCTGAAGAAAGATGAACAGCAGGTGCGATGTGGGTGTGCACTAATTTGCACGGGAGTTGCTAAAGCTGGACCCTCTTTTGGGTGA

Protein sequence

MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG*
Homology
[Close]
BLAST of Csa6G490010.1 vs. TrEMBL
Match: A0A0A0KL72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490010 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.7e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG 55
          MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG
Sbjct: 1  MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG 54

[Close]
BLAST of Csa6G490010.1 vs. NCBI nr
Match: gi|700193282|gb|KGN48486.1| (hypothetical protein Csa_6G490010 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG 55
          MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG
Sbjct: 1  MLIKYGSHRRIQLLEEVKKEPSSVEGKLKKDEQQVRCGCALICTGVAKAGPSFG 54

The following BLAST results are available for this feature:
BLAST of Csa6G490010.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL72_CUCSA1.7e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490010 PE=4 SV=1[more]
BLAST of Csa6G490010.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193282|gb|KGN48486.1|2.4e-22100.00hypothetical protein Csa_6G490010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa6G490010Csa6G490010gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa6G490010.1Csa6G490010.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa6G490010.1.cds2Csa6G490010.1.cds2CDS
Csa6G490010.1.cds1Csa6G490010.1.cds1CDS