Csa6G448080.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G448080.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr6 : 21057933 .. 21058790 (-)
Sequence length	858

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

mRNA sequence

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

Coding sequence (CDS)

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

Protein sequence

MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMCLLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK*

Homology

[Close]

BLAST of Csa6G448080.1 vs. Swiss-Prot
Match: PELP1_HUMAN (Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-07
Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 1


Query: 130 SDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFEN 189
           SDE+ ++EEEE E +   + +EE FE+E+ D+            YF            E 
Sbjct: 886 SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEE----------YFEE----------EE 945

Query: 190 EEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEI 249
           EEE+ F   E+EF  E+           GE EEEEE+++EEEEE +  + D   G  G  
Sbjct: 946 EEEEEF---EEEFEEEE-----------GELEEEEEEEDEEEEEELEEVEDLEFGTAGGE 976

Query: 250 VSENS 255
           V E +
Sbjct: 1006 VEEGA 976

HSP 2 Score: 40.0 bits (92), Expect = 5.0e-02
Identity = 24/68 (35.29%), Postives = 33/68 (48.53%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EEEEEE      ++   D  E   E   +  E + E  +++  +E 
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944

Query: 274 PETGKGTE 282
            E  +  E
Sbjct: 945 EEEEEDEE 952

HSP 3 Score: 34.7 bits (78), Expect = 2.1e+00
Identity = 25/77 (32.47%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 208 QRAAGI---SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEE 267
           +    I   SSD  EEEEEEE++EEEEEE      ++   D  E   E   +  E + E 
Sbjct: 876 EDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF 935

Query: 268 HDDDVRVELPETGKGTE 282
            +++  +E  E  +  E
Sbjct: 936 EEEEGELEEEEEEEDEE 952

[Close]

BLAST of Csa6G448080.1 vs. Swiss-Prot
Match: PELP1_RAT (Proline-, glutamic acid- and leucine-rich protein 1 OS=Rattus norvegicus GN=Pelp1 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 126 VLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRL 185
           V+ ++  D ++EEEE E +   D +EE FE+E+ D+            YF          
Sbjct: 890 VININSSDEEEEEEEEEEEEDEDVEEEDFEEEEEDE----------EEYFE--------- 949

Query: 186 VFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGD 245
             E EEE+ F   E+EF                EEE E E++EEEEEE +  + D   G 
Sbjct: 950 --EEEEEEEF---EEEF---------------EEEEGELEEEEEEEEEELEEVEDVEFGS 974

Query: 246 LGEI 250
            GE+
Sbjct: 1010 AGEV 974

HSP 2 Score: 33.5 bits (75), Expect = 4.6e+00
Identity = 24/72 (33.33%), Postives = 34/72 (47.22%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EEE+E+      ++   D  E   E      E + EE  ++   EL
Sbjct: 895 SSD--EEEEEEEEEEEEDEDVEEEDFEEEEEDEEEYFEEEEE---EEEFEEEFEEEEGEL 954

Query: 274 PETGKGTENGIK 286
            E  +  E  ++
Sbjct: 955 EEEEEEEEEELE 961

HSP 3 Score: 30.4 bits (67), Expect = 3.9e+01
Identity = 19/70 (27.14%), Postives = 33/70 (47.14%), Query Frame = 1


Query: 208 QRAAGISSDGGEEEEEEEDQEEEEEEAV--PTIVDKSSGDLGEIVSENSSKLMELKIEEH 267
           +    I+ +  +EEEEEE++EEEE+E V      ++   +      E   +  E + EE 
Sbjct: 886 EDLTVININSSDEEEEEEEEEEEEDEDVEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEE 945

Query: 268 DDDVRVELPE 276
           + ++  E  E
Sbjct: 946 EGELEEEEEE 955

[Close]

BLAST of Csa6G448080.1 vs. Swiss-Prot
Match: PELP1_MOUSE (Proline-, glutamic acid- and leucine-rich protein 1 OS=Mus musculus GN=Pelp1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 126 VLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRL 185
           V+ ++  D ++EEEE E +   D +EE FE+E+ D+            YF          
Sbjct: 885 VININSSDEEEEEEEEEEEEDEDEEEEDFEEEEEDE----------EEYFE--------- 944

Query: 186 VFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGD 245
             E EEE+ F   E+EF                EEE E E++EEEEEE +  + D   G 
Sbjct: 945 --EEEEEEEF---EEEF---------------EEEEGELEEEEEEEEEELDEVEDVEFGS 969

Query: 246 LGEI 250
            GE+
Sbjct: 1005 AGEV 969

HSP 2 Score: 33.5 bits (75), Expect = 4.6e+00
Identity = 20/62 (32.26%), Postives = 30/62 (48.39%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EE+E+E      ++   +      E   +  E + EE + ++  E 
Sbjct: 890 SSD-EEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEEEGELEEEE 949

Query: 274 PE 276
            E
Sbjct: 950 EE 950

HSP 3 Score: 30.4 bits (67), Expect = 3.9e+01
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 1


Query: 208 QR--AAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEH 267
           +      I+S   EEEEEEE++EE+E+E      ++   +      E   +  E + EE 
Sbjct: 881 EDLTVININSSDEEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEE 940

Query: 268 DDDVRVELPE 276
           + ++  E  E
Sbjct: 941 EGELEEEEEE 950

HSP 4 Score: 27.7 bits (60), Expect = 2.5e+02
Identity = 22/79 (27.85%), Postives = 35/79 (44.30%), Query Frame = 1


Query: 210 AAGISSDGGEEEEEEED-------QEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKI 269
           ++    +  EEEEEE++       +EEEE+E      ++   +  E   E   +L E + 
Sbjct: 890 SSDEEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEEEGELEEEEE 949

Query: 270 EEHDDDVRVELPETGKGTE 282
           EE ++   VE  E G   E
Sbjct: 950 EEEEELDEVEDVEFGSAGE 968

[Close]

BLAST of Csa6G448080.1 vs. TrEMBL
Match: A0A0A0KER9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G448080 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 1.6e-164
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60
           MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC
Sbjct: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60

Query: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120
           LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK
Sbjct: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120

Query: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180
           LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY
Sbjct: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180

Query: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240
           YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD
Sbjct: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240

Query: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 286
           KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK
Sbjct: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 285

[Close]

BLAST of Csa6G448080.1 vs. TrEMBL
Match: W8BUT2_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-08
Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPE 276
            E   E+++++ E   EE D++   E+ E
Sbjct: 127 EEEAEEDAAEVEEPADEEDDEEEADEVEE 140

[Close]

BLAST of Csa6G448080.1 vs. TrEMBL
Match: W8C0D1_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPETGKGTE 282
            E   E+++++ E   +E D++ + +  E  +  E
Sbjct: 127 EEEAEEDAAEVEE-PADEEDEEEKADEEEAAEEVE 145

[Close]

BLAST of Csa6G448080.1 vs. TrEMBL
Match: W8CAB1_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPETGKGTE 282
            E   E+++++ E   +E D++ + +  E  +  E
Sbjct: 127 EEEAEEDAAEVEE-PADEEDEEEKADEEEAAEEVE 145

[Close]

BLAST of Csa6G448080.1 vs. TrEMBL
Match: A0A0F8C613_LARCR (Triadin OS=Larimichthys crocea GN=EH28_01914 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELE----S 147
           ED  E  G +E E G+   ++  + ++ +Y      G   EL +E+  +EE E E     
Sbjct: 120 EDEEEEVGEEEGEEGD---EVEAAGEEEEYA-----GEEEELEEEEEAEEEAEEEYYEEE 179

Query: 148 DHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           +  Y+ DEE +E+++     +   Y     Y+     Y      E EEE+  + +E+E  
Sbjct: 180 EEYYEEDEEYYEEDEEYYEEDEEYYEEDEGYYEEGEEYEEE---EGEEEEGEVEEEEEEE 239

Query: 208 FEKLQRAAGISS----DGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLME 267
            E+ + AA +      +G +EEE EE++EEEEEE   T   +   + GE V E   +  E
Sbjct: 240 GEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEEEEEEE 299

Query: 268 LK------IEEHDDDVRVELPETG 278
            +      +EE +++   E  E G
Sbjct: 300 EEEEGGEAVEEEEEEEEEEEEEEG 312

[Close]

BLAST of Csa6G448080.1 vs. NCBI nr
Match: gi|700192996|gb|KGN48200.1| (hypothetical protein Csa_6G448080 [Cucumis sativus])

HSP 1 Score: 586.6 bits (1511), Expect = 2.3e-164
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60
           MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC
Sbjct: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60

Query: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120
           LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK
Sbjct: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120

Query: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180
           LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY
Sbjct: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180

Query: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240
           YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD
Sbjct: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240

Query: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 286
           KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK
Sbjct: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 285

[Close]

BLAST of Csa6G448080.1 vs. NCBI nr
Match: gi|808859388|gb|KKF11524.1| (Triadin [Larimichthys crocea])

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-06
Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELE----S 147
           ED  E  G +E E G+   ++  + ++ +Y      G   EL +E+  +EE E E     
Sbjct: 120 EDEEEEVGEEEGEEGD---EVEAAGEEEEYA-----GEEEELEEEEEAEEEAEEEYYEEE 179

Query: 148 DHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           +  Y+ DEE +E+++     +   Y     Y+     Y      E EEE+  + +E+E  
Sbjct: 180 EEYYEEDEEYYEEDEEYYEEDEEYYEEDEGYYEEGEEYEEE---EGEEEEGEVEEEEEEE 239

Query: 208 FEKLQRAAGISS----DGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLME 267
            E+ + AA +      +G +EEE EE++EEEEEE   T   +   + GE V E   +  E
Sbjct: 240 GEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEEEEEEE 299

Query: 268 LK------IEEHDDDVRVELPETG 278
            +      +EE +++   E  E G
Sbjct: 300 EEEEGGEAVEEEEEEEEEEEEEEG 312

[Close]

BLAST of Csa6G448080.1 vs. NCBI nr
Match: gi|808859388|gb|KKF11524.1| (Triadin [Larimichthys crocea])

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 54/202 (26.73%), Postives = 88/202 (43.56%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSY 147
           E+ GE+   +E E  E        +++ +       G   E  +E+ ++EEEE E   + 
Sbjct: 216 EEEGEVEEEEEEEGEEDKGAAVVEEEEEEE------GADEEEGEEEEEEEEEEEEGTEAA 275

Query: 148 DYDEE----IFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           + +EE    + E+E+ ++  E  G                  V E EEE+    +E+E  
Sbjct: 276 EEEEEGGEAVEEEEEEEEEEEEEGGEA---------------VEEEEEEEE---EEEE-- 335

Query: 208 FEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEI----VSENSSKLME 267
            E+   AA    +GGE  EEEE++EEEEEE    + +K   + GE       E   +  E
Sbjct: 336 -EEGTEAAEEEEEGGEAVEEEEEEEEEEEEGAEAVEEKDEEEGGEADEEEEEEEGGEADE 390

Query: 268 LKIEEHDDDVRVELPETGKGTE 282
            + EE +D+ + E  E     E
Sbjct: 396 EEEEEEEDEPKEEEVEAAAQEE 390

HSP 2 Score: 45.8 bits (107), Expect = 1.4e-01
Identity = 47/170 (27.65%), Postives = 73/170 (42.94%), Query Frame = 1


Query: 109 YFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGY 168
           Y+ +D+  Y          E  +E  +++EE  E D  Y  + E +E+E+ ++    V  
Sbjct: 174 YYEEDEEYY----------EEDEEYYEEDEEYYEEDEGYYEEGEEYEEEEGEEEEGEVEE 233

Query: 169 RICNLYFPGDFYYVVRLVFENE---EEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEE 228
                        VV    E E   EE+    +E+E   E+   AA    +GGE  EEEE
Sbjct: 234 EEEEEGEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEE 293

Query: 229 DQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPE 276
           ++EEEEEE     V++   +  E   E  ++  E   EE +    VE  E
Sbjct: 294 EEEEEEEEEGGEAVEEEEEEEEEEEEEEGTEAAE---EEEEGGEAVEEEE 330

HSP 3 Score: 45.8 bits (107), Expect = 1.4e-01
Identity = 42/159 (26.42%), Postives = 70/159 (44.03%), Query Frame = 1


Query: 129 LSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFE 188
           + +E+ ++EEEE E   + + +EE  E+E+ ++  E                       E
Sbjct: 279 VEEEEEEEEEEEEEGGEAVEEEEEEEEEEEEEEGTEAA---------------------E 338

Query: 189 NEEEDRFLVKEDEFLFEKLQRAAGI-----SSDGGEEEEEEE-------DQEEEEEEAVP 248
            EEE    V+E+E   E+ +  A         +GGE +EEEE       D+EEEEEE   
Sbjct: 339 EEEEGGEAVEEEEEEEEEEEEGAEAVEEKDEEEGGEADEEEEEEEGGEADEEEEEEEE-- 398

Query: 249 TIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPE 276
              D+   +  E  ++   +  E+K EE +++   E  E
Sbjct: 399 ---DEPKEEEVEAAAQEEEE--EVKAEEEEEEEEEEEEE 409

The following BLAST results are available for this feature:

BLAST of Csa6G448080.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PELP1_HUMAN	5.1e-07	33.60	Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=...	[more]
PELP1_RAT	4.3e-06	31.45	Proline-, glutamic acid- and leucine-rich protein 1 OS=Rattus norvegicus GN=Pelp...	[more]
PELP1_MOUSE	5.7e-06	31.45	Proline-, glutamic acid- and leucine-rich protein 1 OS=Mus musculus GN=Pelp1 PE=...	[more]

BLAST of Csa6G448080.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER9_CUCSA	1.6e-164	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G448080 PE=4 SV=1	[more]
W8BUT2_CERCA	4.2e-08	28.86	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
W8C0D1_CERCA	2.1e-07	27.10	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
W8CAB1_CERCA	2.1e-07	27.10	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
A0A0F8C613_LARCR	3.0e-06	27.45	Triadin OS=Larimichthys crocea GN=EH28_01914 PE=4 SV=1	[more]

BLAST of Csa6G448080.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192996\|gb\|KGN48200.1\|	2.3e-164	100.00	hypothetical protein Csa_6G448080 [Cucumis sativus]	[more]
gi\|808859388\|gb\|KKF11524.1\|	4.3e-06	27.45	Triadin [Larimichthys crocea]	[more]
gi\|808859388\|gb\|KKF11524.1\|	2.4e-04	26.73	Triadin [Larimichthys crocea]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G448080	Csa6G448080	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G448080.1	Csa6G448080.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G448080.1.cds1	Csa6G448080.1.cds1	CDS