Csa6G448080 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G448080
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr6 : 21057933 .. 21058790 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

mRNA sequence

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

Coding sequence (CDS)

ATGGATCCCTCCAATGTTGACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGACGAAGAGAAATTCCCATGGATCCCTCCAATGCCCTACATCCGGCCAATGTTTACGACGGCGATCACTTTCTTCCTGCTGCCAACACAAGTCTAAGAGAAATTCCTAAATCACCGCCAATGTGTCTGCTTTATGGATATATCCTGGCTGGAAATCAGCCTTCCGATCACGCCGCTTTCAAGATTCAATATCTTTCCTGTTCCTTTGAAGACAATGGAGAAATCTTCGGCGGCCAAGAGAACGAACACGGCGAATGTGTTTTCGACATATACTTTTCGCAAGATGACAATGATTATCTTGTCAAATTAGTTTTTGGTCCAGTGCTTGAATTGTCTGATGAAGATTCGCAGCAAGAAGAAGAAGAATTAGAAAGTGATCATTCCTACGATTACGATGAAGAAATTTTCGAGGATGAACAGAGTGACGATAATCTAGAACCTGTCGGTTATCGCATTTGTAATTTATATTTTCCTGGAGACTTTTACTATGTTGTCCGATTAGTTTTTGAAAATGAAGAAGAAGATAGGTTTCTTGTGAAAGAAGATGAGTTTCTTTTCGAGAAACTGCAGCGAGCAGCGGGAATTTCATCTGACGGAGGAGAAGAAGAAGAAGAGGAAGAAGATCAAGAAGAAGAAGAAGAAGAAGCAGTTCCGACAATCGTTGATAAATCCTCCGGTGATCTAGGGGAAATTGTATCGGAGAATTCAAGTAAACTGATGGAATTAAAGATTGAAGAACATGACGATGATGTTAGAGTCGAGCTTCCAGAAACGGGAAAAGGAACCGAAAATGGAATTAAATGA

Protein sequence

MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMCLLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK*

Homology

[Close]

BLAST of Csa6G448080 vs. Swiss-Prot
Match: PELP1_HUMAN (Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.1e-07
Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 1


Query: 130 SDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFEN 189
           SDE+ ++EEEE E +   + +EE FE+E+ D+            YF            E 
Sbjct: 886 SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEE----------YFEE----------EE 945

Query: 190 EEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEI 249
           EEE+ F   E+EF  E+           GE EEEEE+++EEEEE +  + D   G  G  
Sbjct: 946 EEEEEF---EEEFEEEE-----------GELEEEEEEEDEEEEEELEEVEDLEFGTAGGE 976

Query: 250 VSENS 255
           V E +
Sbjct: 1006 VEEGA 976

HSP 2 Score: 40.0 bits (92), Expect = 5.0e-02
Identity = 24/68 (35.29%), Postives = 33/68 (48.53%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EEEEEE      ++   D  E   E   +  E + E  +++  +E 
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944

Query: 274 PETGKGTE 282
            E  +  E
Sbjct: 945 EEEEEDEE 952

HSP 3 Score: 34.7 bits (78), Expect = 2.1e+00
Identity = 25/77 (32.47%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 208 QRAAGI---SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEE 267
           +    I   SSD  EEEEEEE++EEEEEE      ++   D  E   E   +  E + E 
Sbjct: 876 EDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF 935

Query: 268 HDDDVRVELPETGKGTE 282
            +++  +E  E  +  E
Sbjct: 936 EEEEGELEEEEEEEDEE 952

[Close]

BLAST of Csa6G448080 vs. Swiss-Prot
Match: PELP1_RAT (Proline-, glutamic acid- and leucine-rich protein 1 OS=Rattus norvegicus GN=Pelp1 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 126 VLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRL 185
           V+ ++  D ++EEEE E +   D +EE FE+E+ D+            YF          
Sbjct: 890 VININSSDEEEEEEEEEEEEDEDVEEEDFEEEEEDE----------EEYFE--------- 949

Query: 186 VFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGD 245
             E EEE+ F   E+EF                EEE E E++EEEEEE +  + D   G 
Sbjct: 950 --EEEEEEEF---EEEF---------------EEEEGELEEEEEEEEEELEEVEDVEFGS 974

Query: 246 LGEI 250
            GE+
Sbjct: 1010 AGEV 974

HSP 2 Score: 33.5 bits (75), Expect = 4.6e+00
Identity = 24/72 (33.33%), Postives = 34/72 (47.22%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EEE+E+      ++   D  E   E      E + EE  ++   EL
Sbjct: 895 SSD--EEEEEEEEEEEEDEDVEEEDFEEEEEDEEEYFEEEEE---EEEFEEEFEEEEGEL 954

Query: 274 PETGKGTENGIK 286
            E  +  E  ++
Sbjct: 955 EEEEEEEEEELE 961

HSP 3 Score: 30.4 bits (67), Expect = 3.9e+01
Identity = 19/70 (27.14%), Postives = 33/70 (47.14%), Query Frame = 1


Query: 208 QRAAGISSDGGEEEEEEEDQEEEEEEAV--PTIVDKSSGDLGEIVSENSSKLMELKIEEH 267
           +    I+ +  +EEEEEE++EEEE+E V      ++   +      E   +  E + EE 
Sbjct: 886 EDLTVININSSDEEEEEEEEEEEEDEDVEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEE 945

Query: 268 DDDVRVELPE 276
           + ++  E  E
Sbjct: 946 EGELEEEEEE 955

[Close]

BLAST of Csa6G448080 vs. Swiss-Prot
Match: PELP1_MOUSE (Proline-, glutamic acid- and leucine-rich protein 1 OS=Mus musculus GN=Pelp1 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06
Identity = 39/124 (31.45%), Postives = 54/124 (43.55%), Query Frame = 1


Query: 126 VLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRL 185
           V+ ++  D ++EEEE E +   D +EE FE+E+ D+            YF          
Sbjct: 885 VININSSDEEEEEEEEEEEEDEDEEEEDFEEEEEDE----------EEYFE--------- 944

Query: 186 VFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGD 245
             E EEE+ F   E+EF                EEE E E++EEEEEE +  + D   G 
Sbjct: 945 --EEEEEEEF---EEEF---------------EEEEGELEEEEEEEEEELDEVEDVEFGS 969

Query: 246 LGEI 250
            GE+
Sbjct: 1005 AGEV 969

HSP 2 Score: 33.5 bits (75), Expect = 4.6e+00
Identity = 20/62 (32.26%), Postives = 30/62 (48.39%), Query Frame = 1


Query: 214 SSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVEL 273
           SSD  EEEEEEE++EE+E+E      ++   +      E   +  E + EE + ++  E 
Sbjct: 890 SSD-EEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEEEGELEEEE 949

Query: 274 PE 276
            E
Sbjct: 950 EE 950

HSP 3 Score: 30.4 bits (67), Expect = 3.9e+01
Identity = 19/70 (27.14%), Postives = 32/70 (45.71%), Query Frame = 1


Query: 208 QR--AAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEH 267
           +      I+S   EEEEEEE++EE+E+E      ++   +      E   +  E + EE 
Sbjct: 881 EDLTVININSSDEEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEE 940

Query: 268 DDDVRVELPE 276
           + ++  E  E
Sbjct: 941 EGELEEEEEE 950

HSP 4 Score: 27.7 bits (60), Expect = 2.5e+02
Identity = 22/79 (27.85%), Postives = 35/79 (44.30%), Query Frame = 1


Query: 210 AAGISSDGGEEEEEEED-------QEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKI 269
           ++    +  EEEEEE++       +EEEE+E      ++   +  E   E   +L E + 
Sbjct: 890 SSDEEEEEEEEEEEEDEDEEEEDFEEEEEDEEEYFEEEEEEEEFEEEFEEEEGELEEEEE 949

Query: 270 EEHDDDVRVELPETGKGTE 282
           EE ++   VE  E G   E
Sbjct: 950 EEEEELDEVEDVEFGSAGE 968

[Close]

BLAST of Csa6G448080 vs. TrEMBL
Match: A0A0A0KER9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G448080 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 1.6e-164
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60
           MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC
Sbjct: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60

Query: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120
           LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK
Sbjct: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120

Query: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180
           LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY
Sbjct: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180

Query: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240
           YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD
Sbjct: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240

Query: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 286
           KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK
Sbjct: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 285

[Close]

BLAST of Csa6G448080 vs. TrEMBL
Match: W8BUT2_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-08
Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPE 276
            E   E+++++ E   EE D++   E+ E
Sbjct: 127 EEEAEEDAAEVEEPADEEDDEEEADEVEE 140

[Close]

BLAST of Csa6G448080 vs. TrEMBL
Match: W8C0D1_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPETGKGTE 282
            E   E+++++ E   +E D++ + +  E  +  E
Sbjct: 127 EEEAEEDAAEVEE-PADEEDEEEKADEEEAAEEVE 145

[Close]

BLAST of Csa6G448080 vs. TrEMBL
Match: W8CAB1_CERCA (Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 131 DEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENE 190
           +E+ ++EEEE E +   + DEE  E+E+S++ +E               +Y   L+ +NE
Sbjct: 7   EEEEEEEEEEAEEEEEEEEDEEAVEEEESEEPIERA-------------FYSAELLEDNE 66

Query: 191 EE----DRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDL 250
           EE    +    +++E   E ++   G   +GGE EEE+E++E  EEEA     + +  +L
Sbjct: 67  EEGEEEEEGQAEDEEVEVESVEEDEGEEEEGGEVEEEQEEEEYAEEEA--EAEEAAEEEL 126

Query: 251 GEIVSENSSKLMELKIEEHDDDVRVELPETGKGTE 282
            E   E+++++ E   +E D++ + +  E  +  E
Sbjct: 127 EEEAEEDAAEVEE-PADEEDEEEKADEEEAAEEVE 145

[Close]

BLAST of Csa6G448080 vs. TrEMBL
Match: A0A0F8C613_LARCR (Triadin OS=Larimichthys crocea GN=EH28_01914 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELE----S 147
           ED  E  G +E E G+   ++  + ++ +Y      G   EL +E+  +EE E E     
Sbjct: 120 EDEEEEVGEEEGEEGD---EVEAAGEEEEYA-----GEEEELEEEEEAEEEAEEEYYEEE 179

Query: 148 DHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           +  Y+ DEE +E+++     +   Y     Y+     Y      E EEE+  + +E+E  
Sbjct: 180 EEYYEEDEEYYEEDEEYYEEDEEYYEEDEGYYEEGEEYEEE---EGEEEEGEVEEEEEEE 239

Query: 208 FEKLQRAAGISS----DGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLME 267
            E+ + AA +      +G +EEE EE++EEEEEE   T   +   + GE V E   +  E
Sbjct: 240 GEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEEEEEEE 299

Query: 268 LK------IEEHDDDVRVELPETG 278
            +      +EE +++   E  E G
Sbjct: 300 EEEEGGEAVEEEEEEEEEEEEEEG 312

[Close]

BLAST of Csa6G448080 vs. NCBI nr
Match: gi|700192996|gb|KGN48200.1| (hypothetical protein Csa_6G448080 [Cucumis sativus])

HSP 1 Score: 586.6 bits (1511), Expect = 2.3e-164
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60
           MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC
Sbjct: 1   MDPSNVDDGDHFLPAANTRRREIPMDPSNALHPANVYDGDHFLPAANTSLREIPKSPPMC 60

Query: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120
           LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK
Sbjct: 61  LLYGYILAGNQPSDHAAFKIQYLSCSFEDNGEIFGGQENEHGECVFDIYFSQDDNDYLVK 120

Query: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180
           LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY
Sbjct: 121 LVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFY 180

Query: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240
           YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD
Sbjct: 181 YVVRLVFENEEEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVD 240

Query: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 286
           KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK
Sbjct: 241 KSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPETGKGTENGIK 285

[Close]

BLAST of Csa6G448080 vs. NCBI nr
Match: gi|808859388|gb|KKF11524.1| (Triadin [Larimichthys crocea])

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-06
Identity = 56/204 (27.45%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELE----S 147
           ED  E  G +E E G+   ++  + ++ +Y      G   EL +E+  +EE E E     
Sbjct: 120 EDEEEEVGEEEGEEGD---EVEAAGEEEEYA-----GEEEELEEEEEAEEEAEEEYYEEE 179

Query: 148 DHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           +  Y+ DEE +E+++     +   Y     Y+     Y      E EEE+  + +E+E  
Sbjct: 180 EEYYEEDEEYYEEDEEYYEEDEEYYEEDEGYYEEGEEYEEE---EGEEEEGEVEEEEEEE 239

Query: 208 FEKLQRAAGISS----DGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLME 267
            E+ + AA +      +G +EEE EE++EEEEEE   T   +   + GE V E   +  E
Sbjct: 240 GEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEEEEEEE 299

Query: 268 LK------IEEHDDDVRVELPETG 278
            +      +EE +++   E  E G
Sbjct: 300 EEEEGGEAVEEEEEEEEEEEEEEG 312

[Close]

BLAST of Csa6G448080 vs. NCBI nr
Match: gi|808859388|gb|KKF11524.1| (Triadin [Larimichthys crocea])

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 54/202 (26.73%), Postives = 88/202 (43.56%), Query Frame = 1


Query: 88  EDNGEIFGGQENEHGECVFDIYFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSY 147
           E+ GE+   +E E  E        +++ +       G   E  +E+ ++EEEE E   + 
Sbjct: 216 EEEGEVEEEEEEEGEEDKGAAVVEEEEEEE------GADEEEGEEEEEEEEEEEEGTEAA 275

Query: 148 DYDEE----IFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFENEEEDRFLVKEDEFL 207
           + +EE    + E+E+ ++  E  G                  V E EEE+    +E+E  
Sbjct: 276 EEEEEGGEAVEEEEEEEEEEEEEGGEA---------------VEEEEEEEE---EEEE-- 335

Query: 208 FEKLQRAAGISSDGGEEEEEEEDQEEEEEEAVPTIVDKSSGDLGEI----VSENSSKLME 267
            E+   AA    +GGE  EEEE++EEEEEE    + +K   + GE       E   +  E
Sbjct: 336 -EEGTEAAEEEEEGGEAVEEEEEEEEEEEEGAEAVEEKDEEEGGEADEEEEEEEGGEADE 390

Query: 268 LKIEEHDDDVRVELPETGKGTE 282
            + EE +D+ + E  E     E
Sbjct: 396 EEEEEEEDEPKEEEVEAAAQEE 390

HSP 2 Score: 45.8 bits (107), Expect = 1.4e-01
Identity = 47/170 (27.65%), Postives = 73/170 (42.94%), Query Frame = 1


Query: 109 YFSQDDNDYLVKLVFGPVLELSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGY 168
           Y+ +D+  Y          E  +E  +++EE  E D  Y  + E +E+E+ ++    V  
Sbjct: 174 YYEEDEEYY----------EEDEEYYEEDEEYYEEDEGYYEEGEEYEEEEGEEEEGEVEE 233

Query: 169 RICNLYFPGDFYYVVRLVFENE---EEDRFLVKEDEFLFEKLQRAAGISSDGGEEEEEEE 228
                        VV    E E   EE+    +E+E   E+   AA    +GGE  EEEE
Sbjct: 234 EEEEEGEEDKGAAVVEEEEEEEGADEEEGEEEEEEEEEEEEGTEAAEEEEEGGEAVEEEE 293

Query: 229 DQEEEEEEAVPTIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPE 276
           ++EEEEEE     V++   +  E   E  ++  E   EE +    VE  E
Sbjct: 294 EEEEEEEEEGGEAVEEEEEEEEEEEEEEGTEAAE---EEEEGGEAVEEEE 330

HSP 3 Score: 45.8 bits (107), Expect = 1.4e-01
Identity = 42/159 (26.42%), Postives = 70/159 (44.03%), Query Frame = 1


Query: 129 LSDEDSQQEEEELESDHSYDYDEEIFEDEQSDDNLEPVGYRICNLYFPGDFYYVVRLVFE 188
           + +E+ ++EEEE E   + + +EE  E+E+ ++  E                       E
Sbjct: 279 VEEEEEEEEEEEEEGGEAVEEEEEEEEEEEEEEGTEAA---------------------E 338

Query: 189 NEEEDRFLVKEDEFLFEKLQRAAGI-----SSDGGEEEEEEE-------DQEEEEEEAVP 248
            EEE    V+E+E   E+ +  A         +GGE +EEEE       D+EEEEEE   
Sbjct: 339 EEEEGGEAVEEEEEEEEEEEEGAEAVEEKDEEEGGEADEEEEEEEGGEADEEEEEEEE-- 398

Query: 249 TIVDKSSGDLGEIVSENSSKLMELKIEEHDDDVRVELPE 276
              D+   +  E  ++   +  E+K EE +++   E  E
Sbjct: 399 ---DEPKEEEVEAAAQEEEE--EVKAEEEEEEEEEEEEE 409

The following BLAST results are available for this feature:

BLAST of Csa6G448080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PELP1_HUMAN	5.1e-07	33.60	Proline-, glutamic acid- and leucine-rich protein 1 OS=Homo sapiens GN=PELP1 PE=...	[more]
PELP1_RAT	4.3e-06	31.45	Proline-, glutamic acid- and leucine-rich protein 1 OS=Rattus norvegicus GN=Pelp...	[more]
PELP1_MOUSE	5.7e-06	31.45	Proline-, glutamic acid- and leucine-rich protein 1 OS=Mus musculus GN=Pelp1 PE=...	[more]

BLAST of Csa6G448080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER9_CUCSA	1.6e-164	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G448080 PE=4 SV=1	[more]
W8BUT2_CERCA	4.2e-08	28.86	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
W8C0D1_CERCA	2.1e-07	27.10	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
W8CAB1_CERCA	2.1e-07	27.10	Uncharacterized protein (Fragment) OS=Ceratitis capitata PE=2 SV=1	[more]
A0A0F8C613_LARCR	3.0e-06	27.45	Triadin OS=Larimichthys crocea GN=EH28_01914 PE=4 SV=1	[more]

BLAST of Csa6G448080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192996\|gb\|KGN48200.1\|	2.3e-164	100.00	hypothetical protein Csa_6G448080 [Cucumis sativus]	[more]
gi\|808859388\|gb\|KKF11524.1\|	4.3e-06	27.45	Triadin [Larimichthys crocea]	[more]
gi\|808859388\|gb\|KKF11524.1\|	2.4e-04	26.73	Triadin [Larimichthys crocea]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU089630	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G448080.1	Csa6G448080.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU089630	CU089630	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G448080	MELO3C024480	Melon (DHL92) v3.5.1	cumeB508
Csa6G448080	Lsi01G012950	Bottle gourd (USVL1VR-Ls)	culsiB435
Csa6G448080	MELO3C024480.2	Melon (DHL92) v3.6.1	cumedB487
Csa6G448080	Bhi03G001186	Wax gourd	cuwgoB629
Csa6G448080	CSPI06G24850	Wild cucumber (PI 183967)	cpicuB313
Csa6G448080	Cp4.1LG19g03690	Cucurbita pepo (Zucchini)	cpecuB503
Csa6G448080	Carg25563	Silver-seed gourd	carcuB0678

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G448080	Cucumber (Gy14) v2	cgybcuB137
Csa6G448080	Cucumber (Gy14) v2	cgybcuB281
Csa6G448080	Cucumber (Gy14) v2	cgybcuB284
Csa6G448080	Melon (DHL92) v3.6.1	cumedB411
Csa6G448080	Melon (DHL92) v3.6.1	cumedB464
Csa6G448080	Silver-seed gourd	carcuB0181
Csa6G448080	Silver-seed gourd	carcuB0267
Csa6G448080	Silver-seed gourd	carcuB0278
Csa6G448080	Watermelon (97103) v2	cuwmbB418
Csa6G448080	Watermelon (97103) v2	cuwmbB434
Csa6G448080	Watermelon (97103) v2	cuwmbB455
Csa6G448080	Wax gourd	cuwgoB529
Csa6G448080	Wax gourd	cuwgoB614
Csa6G448080	Cucumber (Chinese Long) v2	cucuB109
Csa6G448080	Cucumber (Chinese Long) v2	cucuB168
Csa6G448080	Cucumber (Gy14) v1	cgycuB167
Csa6G448080	Cucumber (Gy14) v1	cgycuB439
Csa6G448080	Cucumber (Gy14) v1	cgycuB542
Csa6G448080	Cucurbita maxima (Rimu)	cmacuB267
Csa6G448080	Cucurbita maxima (Rimu)	cmacuB561
Csa6G448080	Cucurbita maxima (Rimu)	cmacuB681
Csa6G448080	Cucurbita maxima (Rimu)	cmacuB840
Csa6G448080	Cucurbita maxima (Rimu)	cmacuB878
Csa6G448080	Cucurbita moschata (Rifu)	cmocuB253
Csa6G448080	Cucurbita moschata (Rifu)	cmocuB670
Csa6G448080	Cucurbita moschata (Rifu)	cmocuB828
Csa6G448080	Cucurbita moschata (Rifu)	cmocuB865
Csa6G448080	Melon (DHL92) v3.5.1	cumeB484
Csa6G448080	Watermelon (Charleston Gray)	cuwcgB424
Csa6G448080	Watermelon (Charleston Gray)	cuwcgB444
Csa6G448080	Watermelon (Charleston Gray)	cuwcgB464
Csa6G448080	Watermelon (97103) v1	cuwmB452
Csa6G448080	Watermelon (97103) v1	cuwmB505
Csa6G448080	Watermelon (97103) v1	cuwmB518
Csa6G448080	Cucurbita pepo (Zucchini)	cpecuB085
Csa6G448080	Cucurbita pepo (Zucchini)	cpecuB296
Csa6G448080	Cucurbita pepo (Zucchini)	cpecuB624
Csa6G448080	Cucurbita pepo (Zucchini)	cpecuB876
Csa6G448080	Bottle gourd (USVL1VR-Ls)	culsiB445