Csa6G206350.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGTGACGTTTTGTGACCGGCAACGCCAAGAAGCTCGAGGAAGTTTGAGCAATATTGGGAAATTCAATTCCTTTTCGTTCTCTCAAGCTTGACTTGACGAAGTTGCAAGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAAGAGCTCTCAATTCCAAAGGCC ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAA ATGTGTTTTTGGAGTTTGATCCAATCTCCTGATCAAAAATTTGAGGAATTCGATTCCAAAATGGCGACAAGAATTGGATTGGTGCTTCCTTCTAGCCGGCGAGCCAGAAGATATATCGAAAGAGAAGCTCGGTTGGCTGCTATTCAGGTTAATGGGTCGGTTCTGGTGGAAGATACATGCCTCTGCTTCAATGCTTTGAAGGGTCTTCCTAGGTTATTGCTTGGGGCTGGAGAAATTGGGGAAACACAGAAACAAGCTAGTACTTCTGTCGCTGGTGGACTACTCCATTTGTATCTTGTTATGCTGCTACCATTAGAGTTGGAGAAAGAGTTAATCCATATGATTATCATTCAACTGTAA MCFWSLIQSPDQKFEEFDSKMATRIGLVLPSSRRARRYIEREARLAAIQVNGSVLVEDTCLCFNALKGLPRLLLGAGEIGETQKQASTSVAGGLLHLYLVMLLPLELEKELIHMIIIQL*
BLAST of Csa6G206350.1 vs. Swiss-Prot
Match: ITPA_MAIZE (Inosine triphosphate pyrophosphatase OS=Zea mays PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08 Identity = 31/45 (68.89%), Postives = 32/45 (71.11%), Query Frame = 1
BLAST of Csa6G206350.1 vs. Swiss-Prot
Match: ITPA_VITVI (Inosine triphosphate pyrophosphatase OS=Vitis vinifera GN=VIT_05s0051g00580 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.4e-08 Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa6G206350.1 vs. Swiss-Prot
Match: ITPA_ARATH (Inosine triphosphate pyrophosphatase OS=Arabidopsis thaliana GN=At4g13720 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.8e-07 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa6G206350.1 vs. Swiss-Prot
Match: ITPA_SORBI (Inosine triphosphate pyrophosphatase OS=Sorghum bicolor GN=Sb01g020160 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.3e-07 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 1
BLAST of Csa6G206350.1 vs. Swiss-Prot
Match: ITPA_ORYSJ (Inosine triphosphate pyrophosphatase OS=Oryza sativa subsp. japonica GN=Os10g0457500 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 6.3e-07 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TrEMBL
Match: A0A0A0KFK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G206350 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-58 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TrEMBL
Match: A0A096Q2W1_MAIZE (Uncharacterized protein OS=Zea mays GN=pco148511 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-06 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TrEMBL
Match: R0FB22_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v100058091mg PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-06 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TrEMBL
Match: A5AZ69_VITVI (Inosine triphosphate pyrophosphatase OS=Vitis vinifera GN=VITISV_004933 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-06 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TrEMBL
Match: A0A067EY21_CITSI (Inosine triphosphate pyrophosphatase OS=Citrus sinensis GN=CISIN_1g028718mg PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.2e-06 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1
BLAST of Csa6G206350.1 vs. TAIR10
Match: AT4G13720.1 (AT4G13720.1 Inosine triphosphate pyrophosphatase family protein) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 1
BLAST of Csa6G206350.1 vs. NCBI nr
Match: gi|700192008|gb|KGN47212.1| (hypothetical protein Csa_6G206350 [Cucumis sativus]) HSP 1 Score: 233.8 bits (595), Expect = 1.6e-58 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Csa6G206350.1 vs. NCBI nr
Match: gi|226508376|ref|NP_001150363.1| (inosine triphosphate pyrophosphatase [Zea mays]) HSP 1 Score: 58.9 bits (141), Expect = 6.9e-06 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of Csa6G206350.1 vs. NCBI nr
Match: gi|414871223|tpg|DAA49780.1| (TPA: hypothetical protein ZEAMMB73_946257 [Zea mays]) HSP 1 Score: 58.9 bits (141), Expect = 6.9e-06 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
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