Csa6G148340.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa6G148340.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 10382265 .. 10382516 (+)
Sequence length252
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

mRNA sequence

ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

Coding sequence (CDS)

ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

Protein sequence

MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSELKPQRGLQNPMKGHIIYINTLNLK*
Homology
[Close]
BLAST of Csa6G148340.1 vs. TrEMBL
Match: A0A0A0KEQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148340 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.7e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60
          MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL
Sbjct: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60

Query: 61 KPQRGLQNPMKGHIIYINTLNLK 84
          KPQRGLQNPMKGHIIYINTLNLK
Sbjct: 61 KPQRGLQNPMKGHIIYINTLNLK 83

[Close]
BLAST of Csa6G148340.1 vs. NCBI nr
Match: gi|700191688|gb|KGN46892.1| (hypothetical protein Csa_6G148340 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1 

Query: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60
          MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL
Sbjct: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60

Query: 61 KPQRGLQNPMKGHIIYINTLNLK 84
          KPQRGLQNPMKGHIIYINTLNLK
Sbjct: 61 KPQRGLQNPMKGHIIYINTLNLK 83

The following BLAST results are available for this feature:
BLAST of Csa6G148340.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEQ5_CUCSA3.7e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148340 PE=4 SV=1[more]
BLAST of Csa6G148340.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191688|gb|KGN46892.1|5.3e-37100.00hypothetical protein Csa_6G148340 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa6G148340Csa6G148340gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa6G148340.1Csa6G148340.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa6G148340.1.cds1Csa6G148340.1.cds1CDS