Csa6G148340 (gene) Cucumber (Chinese Long) v2

NameCsa6G148340
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 10382265 .. 10382516 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

mRNA sequence

ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

Coding sequence (CDS)

ATGGAGTTGGAAACTGAGAGTAAGAACACAATACCTGTACTCATAAATGTCGTCGAAGTACTTCTCAGAGTACTAAATCTGACCCATCTATCACTGAGTGGTATTCGTCTTGCAGAATACAACGAAGCGGATTCAATGGTTTTGATCGCGAAAATGAAGCAACGTACGAATAGTGAACTTAAGCCTCAACGAGGGCTCCAGAACCCGATGAAAGGGCATATTATTTATATAAATACGCTCAATTTGAAGTAA

Protein sequence

MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSELKPQRGLQNPMKGHIIYINTLNLK*
BLAST of Csa6G148340 vs. TrEMBL
Match: A0A0A0KEQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148340 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.7e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1

Query: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60
          MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL
Sbjct: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60

Query: 61 KPQRGLQNPMKGHIIYINTLNLK 84
          KPQRGLQNPMKGHIIYINTLNLK
Sbjct: 61 KPQRGLQNPMKGHIIYINTLNLK 83

BLAST of Csa6G148340 vs. NCBI nr
Match: gi|700191688|gb|KGN46892.1| (hypothetical protein Csa_6G148340 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-37
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1

Query: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60
          MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL
Sbjct: 1  MELETESKNTIPVLINVVEVLLRVLNLTHLSLSGIRLAEYNEADSMVLIAKMKQRTNSEL 60

Query: 61 KPQRGLQNPMKGHIIYINTLNLK 84
          KPQRGLQNPMKGHIIYINTLNLK
Sbjct: 61 KPQRGLQNPMKGHIIYINTLNLK 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KEQ5_CUCSA3.7e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148340 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700191688|gb|KGN46892.1|5.3e-37100.00hypothetical protein Csa_6G148340 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU162758cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G148340.1Csa6G148340.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU162758CU162758transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G148340CSPI06G12000Wild cucumber (PI 183967)cpicuB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G148340Wax gourdcuwgoB606
Csa6G148340Wax gourdcuwgoB633
Csa6G148340Cucumber (Chinese Long) v2cucuB115
Csa6G148340Cucumber (Chinese Long) v2cucuB168
Csa6G148340Cucumber (Gy14) v1cgycuB168
Csa6G148340Cucumber (Gy14) v1cgycuB541
Csa6G148340Cucurbita maxima (Rimu)cmacuB268
Csa6G148340Cucurbita maxima (Rimu)cmacuB554
Csa6G148340Cucurbita maxima (Rimu)cmacuB631
Csa6G148340Cucurbita maxima (Rimu)cmacuB879
Csa6G148340Cucurbita moschata (Rifu)cmocuB255
Csa6G148340Cucurbita moschata (Rifu)cmocuB544
Csa6G148340Cucurbita moschata (Rifu)cmocuB621
Csa6G148340Cucurbita moschata (Rifu)cmocuB830
Csa6G148340Melon (DHL92) v3.5.1cumeB413
Csa6G148340Melon (DHL92) v3.5.1cumeB486
Csa6G148340Melon (DHL92) v3.5.1cumeB509
Csa6G148340Watermelon (Charleston Gray)cuwcgB426
Csa6G148340Watermelon (Charleston Gray)cuwcgB436
Csa6G148340Watermelon (Charleston Gray)cuwcgB465
Csa6G148340Watermelon (97103) v1cuwmB453
Csa6G148340Watermelon (97103) v1cuwmB506
Csa6G148340Watermelon (97103) v1cuwmB511
Csa6G148340Cucurbita pepo (Zucchini)cpecuB291
Csa6G148340Bottle gourd (USVL1VR-Ls)culsiB412
Csa6G148340Bottle gourd (USVL1VR-Ls)culsiB436
Csa6G148340Bottle gourd (USVL1VR-Ls)culsiB447
Csa6G148340Bottle gourd (USVL1VR-Ls)culsiB449
Csa6G148340Cucumber (Gy14) v2cgybcuB139
Csa6G148340Cucumber (Gy14) v2cgybcuB282
Csa6G148340Cucumber (Gy14) v2cgybcuB283
Csa6G148340Melon (DHL92) v3.6.1cumedB403
Csa6G148340Melon (DHL92) v3.6.1cumedB466
Csa6G148340Melon (DHL92) v3.6.1cumedB489
Csa6G148340Silver-seed gourdcarcuB0279
Csa6G148340Silver-seed gourdcarcuB0371
Csa6G148340Silver-seed gourdcarcuB0942
Csa6G148340Watermelon (97103) v2cuwmbB419
Csa6G148340Watermelon (97103) v2cuwmbB426
Csa6G148340Watermelon (97103) v2cuwmbB456