Csa6G139180.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa6G139180.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 9834053 .. 9834277 (+)
Sequence length225
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

mRNA sequence

ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

Coding sequence (CDS)

ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

Protein sequence

MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVIDMLDFRCKDMQRLKF*
Homology
[Close]
BLAST of Csa6G139180.1 vs. TrEMBL
Match: A0A0A0KBB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139180 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.9e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60
          MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID
Sbjct: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60

Query: 61 MLDFRCKDMQRLKF 75
          MLDFRCKDMQRLKF
Sbjct: 61 MLDFRCKDMQRLKF 74

[Close]
BLAST of Csa6G139180.1 vs. NCBI nr
Match: gi|700191614|gb|KGN46818.1| (hypothetical protein Csa_6G139180 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60
          MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID
Sbjct: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60

Query: 61 MLDFRCKDMQRLKF 75
          MLDFRCKDMQRLKF
Sbjct: 61 MLDFRCKDMQRLKF 74

The following BLAST results are available for this feature:
BLAST of Csa6G139180.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBB5_CUCSA2.9e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139180 PE=4 SV=1[more]
BLAST of Csa6G139180.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191614|gb|KGN46818.1|4.2e-33100.00hypothetical protein Csa_6G139180 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa6G139180Csa6G139180gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa6G139180.1Csa6G139180.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa6G139180.1.cds1Csa6G139180.1.cds1CDS