Csa6G139180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G139180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 9834053 .. 9834277 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

mRNA sequence

ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

Coding sequence (CDS)

ATGGAGATCTCGGGCAATCTCGAGAACAAGATTGAAAGTAAAAAGGACAATTTGAAGGATCTCGGGGCTATCTCATTATTATGCAGGTCGAGAATGGAGACACGAAAGGATTTAATTGGTGAACTCGGGGTGATCTCAGGTCGATTTTGGTCGGGATCATTAAAAATTTTAGTGATCGATATGTTGGATTTCAGGTGTAAAGACATGCAAAGACTTAAATTTTGA

Protein sequence

MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVIDMLDFRCKDMQRLKF*
Homology
[Close]
BLAST of Csa6G139180 vs. TrEMBL
Match: A0A0A0KBB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139180 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.9e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60
          MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID
Sbjct: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60

Query: 61 MLDFRCKDMQRLKF 75
          MLDFRCKDMQRLKF
Sbjct: 61 MLDFRCKDMQRLKF 74

[Close]
BLAST of Csa6G139180 vs. NCBI nr
Match: gi|700191614|gb|KGN46818.1| (hypothetical protein Csa_6G139180 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1 

Query: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60
          MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID
Sbjct: 1  MEISGNLENKIESKKDNLKDLGAISLLCRSRMETRKDLIGELGVISGRFWSGSLKILVID 60

Query: 61 MLDFRCKDMQRLKF 75
          MLDFRCKDMQRLKF
Sbjct: 61 MLDFRCKDMQRLKF 74

The following BLAST results are available for this feature:
BLAST of Csa6G139180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBB5_CUCSA2.9e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139180 PE=4 SV=1[more]
BLAST of Csa6G139180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191614|gb|KGN46818.1|4.2e-33100.00hypothetical protein Csa_6G139180 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G139180.1Csa6G139180.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G139180Melon (DHL92) v3.6.1cumedB424
Csa6G139180Melon (DHL92) v3.6.1cumedB441
Csa6G139180Silver-seed gourdcarcuB0031
Csa6G139180Silver-seed gourdcarcuB0367
Csa6G139180Silver-seed gourdcarcuB0423
Csa6G139180Silver-seed gourdcarcuB0560
Csa6G139180Watermelon (97103) v2cuwmbB442
Csa6G139180Watermelon (97103) v2cuwmbB509
Csa6G139180Wax gourdcuwgoB562
Csa6G139180Wax gourdcuwgoB597
Csa6G139180Cucumber (Chinese Long) v2cucuB172
Csa6G139180Cucumber (Gy14) v1cgycuB155
Csa6G139180Cucumber (Gy14) v1cgycuB340
Csa6G139180Cucurbita maxima (Rimu)cmacuB143
Csa6G139180Cucurbita maxima (Rimu)cmacuB522
Csa6G139180Cucurbita maxima (Rimu)cmacuB563
Csa6G139180Cucurbita maxima (Rimu)cmacuB623
Csa6G139180Cucurbita moschata (Rifu)cmocuB129
Csa6G139180Cucurbita moschata (Rifu)cmocuB514
Csa6G139180Cucurbita moschata (Rifu)cmocuB553
Csa6G139180Cucurbita moschata (Rifu)cmocuB614
Csa6G139180Melon (DHL92) v3.5.1cumeB443
Csa6G139180Melon (DHL92) v3.5.1cumeB460
Csa6G139180Watermelon (Charleston Gray)cuwcgB418
Csa6G139180Watermelon (Charleston Gray)cuwcgB452
Csa6G139180Watermelon (97103) v1cuwmB446
Csa6G139180Watermelon (97103) v1cuwmB526
Csa6G139180Cucurbita pepo (Zucchini)cpecuB252
Csa6G139180Cucurbita pepo (Zucchini)cpecuB282
Csa6G139180Cucurbita pepo (Zucchini)cpecuB688
Csa6G139180Cucurbita pepo (Zucchini)cpecuB762
Csa6G139180Bottle gourd (USVL1VR-Ls)culsiB407
Csa6G139180Bottle gourd (USVL1VR-Ls)culsiB426
Csa6G139180Cucumber (Gy14) v2cgybcuB282
Csa6G139180Cucumber (Gy14) v2cgybcuB322